RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 PSME1Q06323 249 aa16.44■□□□□ 0.22
HNRNPC-231ENST00000557336 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-231ENST00000557336 MINK1Q8N4C8 1332 aaPredicted RBP16.43■□□□□ 0.22
HNRNPC-231ENST00000557336 FAM83GA6ND36 823 aa16.41■□□□□ 0.22
HNRNPC-231ENST00000557336 PLEKHG5O94827 1062 aa16.41■□□□□ 0.22
HNRNPC-231ENST00000557336 WASLO00401 505 aaPredicted RBP16.4■□□□□ 0.22
HNRNPC-231ENST00000557336 VPS72Q15906 364 aa16.4■□□□□ 0.22
HNRNPC-231ENST00000557336 ARHGEF10O15013 1369 aa16.39■□□□□ 0.21
HNRNPC-231ENST00000557336 ONECUT3O60422 494 aaPredicted RBP16.39■□□□□ 0.21
HNRNPC-231ENST00000557336 STAC3Q96MF2 364 aa16.39■□□□□ 0.21
HNRNPC-231ENST00000557336 ABCA3Q99758 1704 aa16.39■□□□□ 0.21
HNRNPC-231ENST00000557336 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
HNRNPC-231ENST00000557336 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
HNRNPC-231ENST00000557336 TULP4Q9NRJ4 1543 aa16.38■□□□□ 0.21
HNRNPC-231ENST00000557336 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
HNRNPC-231ENST00000557336 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
HNRNPC-231ENST00000557336 ALS2Q96Q42 1657 aa16.36■□□□□ 0.21
HNRNPC-231ENST00000557336 PLCH1Q4KWH8 1693 aa16.35■□□□□ 0.21
HNRNPC-231ENST00000557336 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
HNRNPC-231ENST00000557336 ATP7BP35670 1465 aa16.34■□□□□ 0.21
HNRNPC-231ENST00000557336 NWD2Q9ULI1 1742 aa16.33■□□□□ 0.21
HNRNPC-231ENST00000557336 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.21
HNRNPC-231ENST00000557336 NUDT16Q96DE0 195 aaKnown RBP16.33■□□□□ 0.2
HNRNPC-231ENST00000557336 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
HNRNPC-231ENST00000557336 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.2
HNRNPC-231ENST00000557336 ARHGEF28Q8N1W1 1705 aaKnown RBP16.33■□□□□ 0.2
HNRNPC-231ENST00000557336 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
HNRNPC-231ENST00000557336 BTG4Q9NY30 223 aa16.32■□□□□ 0.2
HNRNPC-231ENST00000557336 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
HNRNPC-231ENST00000557336 DEFB132Q7Z7B7 95 aa16.31■□□□□ 0.2
HNRNPC-231ENST00000557336 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
HNRNPC-231ENST00000557336 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
HNRNPC-231ENST00000557336 CRYBG1Q9Y4K1 1723 aa16.31■□□□□ 0.2
HNRNPC-231ENST00000557336 CDK19Q9BWU1 502 aa16.3■□□□□ 0.2
HNRNPC-231ENST00000557336 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
HNRNPC-231ENST00000557336 KRT27Q7Z3Y8 459 aa16.29■□□□□ 0.2
HNRNPC-231ENST00000557336 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
HNRNPC-231ENST00000557336 CCDC9Q9Y3X0 531 aaKnown RBP16.29■□□□□ 0.2
HNRNPC-231ENST00000557336 FAM98CQ17RN3 349 aaKnown RBP16.28■□□□□ 0.2
HNRNPC-231ENST00000557336 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.2
HNRNPC-231ENST00000557336 SPATA31A5Q5VU36 1347 aa16.27■□□□□ 0.2
HNRNPC-231ENST00000557336 SPATA31A7Q8IWB4 1347 aa16.27■□□□□ 0.2
HNRNPC-231ENST00000557336 PAK3O75914 559 aaPredicted RBP16.27■□□□□ 0.2
HNRNPC-231ENST00000557336 COL14A1Q05707 1796 aaKnown RBP16.26■□□□□ 0.19
HNRNPC-231ENST00000557336 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
HNRNPC-231ENST00000557336 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
HNRNPC-231ENST00000557336 ACEP12821 1306 aa16.25■□□□□ 0.19
HNRNPC-231ENST00000557336 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
HNRNPC-231ENST00000557336 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
HNRNPC-231ENST00000557336 KIAA0232Q92628 1395 aa16.25■□□□□ 0.19
HNRNPC-231ENST00000557336 CHRNA2Q15822 529 aa16.24■□□□□ 0.19
HNRNPC-231ENST00000557336 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
HNRNPC-231ENST00000557336 FAM182BQ5T319 152 aa16.23■□□□□ 0.19
HNRNPC-231ENST00000557336 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
HNRNPC-231ENST00000557336 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
HNRNPC-231ENST00000557336 ITSN1Q15811 1721 aa16.22■□□□□ 0.19
HNRNPC-231ENST00000557336 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
HNRNPC-231ENST00000557336 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.18
HNRNPC-231ENST00000557336 SPATA31A1Q5TZJ5 1347 aa16.2■□□□□ 0.18
HNRNPC-231ENST00000557336 PHRF1Q9P1Y6 1649 aaKnown RBP16.2■□□□□ 0.18
HNRNPC-231ENST00000557336 L3MBTL2Q969R5 705 aa16.2■□□□□ 0.18
HNRNPC-231ENST00000557336 A0A0G2JS52 829 aa16.19■□□□□ 0.18
HNRNPC-231ENST00000557336 MYT1Q01538 1121 aa16.19■□□□□ 0.18
HNRNPC-231ENST00000557336 CABP2Q9NPB3 220 aa16.19■□□□□ 0.18
HNRNPC-231ENST00000557336 USP19O94966 1318 aa16.19■□□□□ 0.18
HNRNPC-231ENST00000557336 CENPJQ9HC77 1338 aaPredicted RBP16.19■□□□□ 0.18
HNRNPC-231ENST00000557336 SIN3AQ96ST3 1273 aa16.18■□□□□ 0.18
HNRNPC-231ENST00000557336 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
HNRNPC-231ENST00000557336 ABTB2Q8N961 1025 aa16.17■□□□□ 0.18
HNRNPC-231ENST00000557336 PPIP5K1Q6PFW1 1433 aa16.17■□□□□ 0.18
HNRNPC-231ENST00000557336 CAMTA1Q9Y6Y1 1673 aa16.17■□□□□ 0.18
HNRNPC-231ENST00000557336 CPDO75976 1380 aa16.16■□□□□ 0.18
HNRNPC-231ENST00000557336 STRN4Q9NRL3 753 aa16.16■□□□□ 0.18
HNRNPC-231ENST00000557336 NRKQ7Z2Y5 1582 aa16.16■□□□□ 0.18
HNRNPC-231ENST00000557336 SRPK2P78362 688 aaKnown RBP16.15■□□□□ 0.18
HNRNPC-231ENST00000557336 EN1Q05925 392 aaPredicted RBP16.15■□□□□ 0.18
HNRNPC-231ENST00000557336 SSH2Q76I76 1423 aa16.14■□□□□ 0.17
HNRNPC-231ENST00000557336 GCP02774 474 aa16.14■□□□□ 0.17
HNRNPC-231ENST00000557336 LARP1Q6PKG0 1096 aaKnown RBP16.14■□□□□ 0.17
HNRNPC-231ENST00000557336 CABP1Q9NZU7 370 aa16.14■□□□□ 0.17
HNRNPC-231ENST00000557336 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.17
HNRNPC-231ENST00000557336 BAG6P46379 1132 aa16.13■□□□□ 0.17
HNRNPC-231ENST00000557336 DISP2A7MBM2 1401 aa16.12■□□□□ 0.17
HNRNPC-231ENST00000557336 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
HNRNPC-231ENST00000557336 BARGINQ6ZT62 677 aa16.12■□□□□ 0.17
HNRNPC-231ENST00000557336 USP6P35125 1406 aa16.11■□□□□ 0.17
HNRNPC-231ENST00000557336 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
HNRNPC-231ENST00000557336 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
HNRNPC-231ENST00000557336 QRICH2Q9H0J4 1663 aa16.11■□□□□ 0.17
HNRNPC-231ENST00000557336 CAMKK2Q96RR4 588 aa16.1■□□□□ 0.17
HNRNPC-231ENST00000557336 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
HNRNPC-231ENST00000557336 BRD4O60885 1362 aaPredicted RBP16.1■□□□□ 0.17
HNRNPC-231ENST00000557336 TRIM37O94972 964 aa16.09■□□□□ 0.17
HNRNPC-231ENST00000557336 EVA1CP58658 441 aa16.09■□□□□ 0.17
HNRNPC-231ENST00000557336 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
HNRNPC-231ENST00000557336 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.17
HNRNPC-231ENST00000557336 RGPD1P0DJD0 1748 aa16.08■□□□□ 0.17
HNRNPC-231ENST00000557336 FAM196AQ6ZSG2 479 aa16.08■□□□□ 0.16
HNRNPC-231ENST00000557336 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.16
HNRNPC-231ENST00000557336 NLRP6P59044 892 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms