RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 SLC12A5Q9H2X9 1139 aa17.65■□□□□ 0.42
APEX1-217ENST00000557181 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
APEX1-217ENST00000557181 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
APEX1-217ENST00000557181 TRPM3Q9HCF6 1732 aaPredicted RBP17.64■□□□□ 0.41
APEX1-217ENST00000557181 USP6P35125 1406 aa17.64■□□□□ 0.41
APEX1-217ENST00000557181 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
APEX1-217ENST00000557181 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
APEX1-217ENST00000557181 MON2Q7Z3U7 1717 aa17.61■□□□□ 0.41
APEX1-217ENST00000557181 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
APEX1-217ENST00000557181 A0A1W2PP64 1363 aa17.6■□□□□ 0.41
APEX1-217ENST00000557181 ANKRD36BQ8N2N9 1353 aa17.6■□□□□ 0.41
APEX1-217ENST00000557181 CPSF1Q10570 1443 aaKnown RBP17.6■□□□□ 0.41
APEX1-217ENST00000557181 ALS2Q96Q42 1657 aa17.6■□□□□ 0.41
APEX1-217ENST00000557181 TTC21AQ8NDW8 1320 aa17.59■□□□□ 0.41
APEX1-217ENST00000557181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.41
APEX1-217ENST00000557181 MYOM1P52179 1685 aa17.58■□□□□ 0.41
APEX1-217ENST00000557181 MED1Q15648 1581 aaPredicted RBP17.58■□□□□ 0.41
APEX1-217ENST00000557181 EDC4Q6P2E9 1401 aaKnown RBP17.58■□□□□ 0.41
APEX1-217ENST00000557181 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.4
APEX1-217ENST00000557181 TTC21BQ7Z4L5 1316 aa17.57■□□□□ 0.4
APEX1-217ENST00000557181 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
APEX1-217ENST00000557181 CD163L1Q9NR16 1453 aa17.56■□□□□ 0.4
APEX1-217ENST00000557181 KIF7Q2M1P5 1343 aa17.56■□□□□ 0.4
APEX1-217ENST00000557181 ADAMTS2O95450 1211 aa17.56■□□□□ 0.4
APEX1-217ENST00000557181 NLRP6P59044 892 aa17.56■□□□□ 0.4
APEX1-217ENST00000557181 NRKQ7Z2Y5 1582 aa17.56■□□□□ 0.4
APEX1-217ENST00000557181 CABLES1Q8TDN4 633 aa17.55■□□□□ 0.4
APEX1-217ENST00000557181 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
APEX1-217ENST00000557181 LRP6O75581 1613 aa17.54■□□□□ 0.4
APEX1-217ENST00000557181 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
APEX1-217ENST00000557181 SSH2Q76I76 1423 aa17.53■□□□□ 0.4
APEX1-217ENST00000557181 ABCA3Q99758 1704 aa17.52■□□□□ 0.4
APEX1-217ENST00000557181 PIK3C2AO00443 1686 aa17.52■□□□□ 0.4
APEX1-217ENST00000557181 C8orf37Q96NL8 207 aa17.52■□□□□ 0.4
APEX1-217ENST00000557181 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
APEX1-217ENST00000557181 NSD3Q9BZ95 1437 aa17.51■□□□□ 0.39
APEX1-217ENST00000557181 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
APEX1-217ENST00000557181 MARF1Q9Y4F3 1742 aaKnown RBP17.5■□□□□ 0.39
APEX1-217ENST00000557181 NME9Q86XW9 330 aa17.5■□□□□ 0.39
APEX1-217ENST00000557181 PANK3Q9H999 370 aa17.5■□□□□ 0.39
APEX1-217ENST00000557181 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
APEX1-217ENST00000557181 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
APEX1-217ENST00000557181 SOX12O15370 315 aa17.49■□□□□ 0.39
APEX1-217ENST00000557181 COG3Q96JB2 828 aa17.49■□□□□ 0.39
APEX1-217ENST00000557181 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
APEX1-217ENST00000557181 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
APEX1-217ENST00000557181 KIF20BQ96Q89 1820 aa17.48■□□□□ 0.39
APEX1-217ENST00000557181 USP19O94966 1318 aa17.47■□□□□ 0.39
APEX1-217ENST00000557181 CRYBG1Q9Y4K1 1723 aa17.47■□□□□ 0.39
APEX1-217ENST00000557181 PRDM11Q9NQV5 511 aa17.47■□□□□ 0.39
APEX1-217ENST00000557181 KNSTRNQ9Y448 316 aa17.47■□□□□ 0.39
APEX1-217ENST00000557181 GCP02774 474 aa17.46■□□□□ 0.39
APEX1-217ENST00000557181 ZC3H6P61129 1189 aaKnown RBP17.46■□□□□ 0.39
APEX1-217ENST00000557181 USP31Q70CQ4 1352 aa17.45■□□□□ 0.38
APEX1-217ENST00000557181 CARD14Q9BXL6 1004 aa17.45■□□□□ 0.38
APEX1-217ENST00000557181 AFF2P51816 1311 aa17.45■□□□□ 0.38
APEX1-217ENST00000557181 KIAA0232Q92628 1395 aa17.44■□□□□ 0.38
APEX1-217ENST00000557181 SLIT3O75094 1523 aa17.44■□□□□ 0.38
APEX1-217ENST00000557181 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
APEX1-217ENST00000557181 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
APEX1-217ENST00000557181 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
APEX1-217ENST00000557181 USP54Q70EL1 1684 aa17.43■□□□□ 0.38
APEX1-217ENST00000557181 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
APEX1-217ENST00000557181 FYB1O15117 783 aa17.42■□□□□ 0.38
APEX1-217ENST00000557181 USP21Q9UK80 565 aa17.42■□□□□ 0.38
APEX1-217ENST00000557181 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
APEX1-217ENST00000557181 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
APEX1-217ENST00000557181 PLCH1Q4KWH8 1693 aa17.41■□□□□ 0.38
APEX1-217ENST00000557181 NSD2O96028 1365 aa17.4■□□□□ 0.38
APEX1-217ENST00000557181 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
APEX1-217ENST00000557181 CHRNA2Q15822 529 aa17.4■□□□□ 0.38
APEX1-217ENST00000557181 CPDO75976 1380 aa17.4■□□□□ 0.38
APEX1-217ENST00000557181 NWD2Q9ULI1 1742 aa17.39■□□□□ 0.37
APEX1-217ENST00000557181 EVA1CP58658 441 aa17.38■□□□□ 0.37
APEX1-217ENST00000557181 FNBP4Q8N3X1 1017 aaPredicted RBP17.38■□□□□ 0.37
APEX1-217ENST00000557181 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
APEX1-217ENST00000557181 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
APEX1-217ENST00000557181 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
APEX1-217ENST00000557181 NFAT5O94916 1531 aa17.37■□□□□ 0.37
APEX1-217ENST00000557181 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
APEX1-217ENST00000557181 TRPC5Q9UL62 973 aaPredicted RBP17.37■□□□□ 0.37
APEX1-217ENST00000557181 SLIT2O94813 1529 aa17.37■□□□□ 0.37
APEX1-217ENST00000557181 LTN1O94822 1766 aa17.36■□□□□ 0.37
APEX1-217ENST00000557181 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
APEX1-217ENST00000557181 MORC1Q86VD1 984 aa17.36■□□□□ 0.37
APEX1-217ENST00000557181 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
APEX1-217ENST00000557181 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
APEX1-217ENST00000557181 AMPHP49418 695 aa17.35■□□□□ 0.37
APEX1-217ENST00000557181 ARHGEF25Q86VW2 580 aa17.35■□□□□ 0.37
APEX1-217ENST00000557181 QTRT2Q9H974 415 aaKnown RBP17.35■□□□□ 0.37
APEX1-217ENST00000557181 AATKQ6ZMQ8 1374 aa17.35■□□□□ 0.37
APEX1-217ENST00000557181 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
APEX1-217ENST00000557181 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
APEX1-217ENST00000557181 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.36
APEX1-217ENST00000557181 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
APEX1-217ENST00000557181 ABCC6O95255 1503 aa17.32■□□□□ 0.36
APEX1-217ENST00000557181 BCL9LQ86UU0 1499 aa17.32■□□□□ 0.36
APEX1-217ENST00000557181 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
APEX1-217ENST00000557181 RGS17Q9UGC6 210 aaPredicted RBP17.32■□□□□ 0.36
APEX1-217ENST00000557181 NRAPQ86VF7 1730 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms