RNA–Protein interactions for RNA: ENST00000557147.1

LINC01578-208, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 3 BASIC

Gene LINC01578, Length 490 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-208ENST00000557147 ONECUT3O60422 494 aaPredicted RBP29■■■□□ 2.23
LINC01578-208ENST00000557147 NEUROD1Q13562 356 aa29■■■□□ 2.23
LINC01578-208ENST00000557147 CCDC125Q86Z20 511 aa29■■■□□ 2.23
LINC01578-208ENST00000557147 NWD2Q9ULI1 1742 aa29■■■□□ 2.23
LINC01578-208ENST00000557147 GLI3P10071 1580 aa28.99■■■□□ 2.23
LINC01578-208ENST00000557147 SRPK2P78362 688 aaKnown RBP28.98■■■□□ 2.23
LINC01578-208ENST00000557147 BTG4Q9NY30 223 aa28.95■■■□□ 2.22
LINC01578-208ENST00000557147 TOPAZ1Q8N9V7 1692 aa28.94■■■□□ 2.22
LINC01578-208ENST00000557147 BRD4O60885 1362 aaPredicted RBP28.94■■■□□ 2.22
LINC01578-208ENST00000557147 CCDC9Q9Y3X0 531 aaKnown RBP28.94■■■□□ 2.22
LINC01578-208ENST00000557147 PLCH1Q4KWH8 1693 aa28.93■■■□□ 2.22
LINC01578-208ENST00000557147 SEPT12Q8IYM1 358 aa28.93■■■□□ 2.22
LINC01578-208ENST00000557147 ROCK2O75116 1388 aaKnown RBP28.92■■■□□ 2.22
LINC01578-208ENST00000557147 PRDM11Q9NQV5 511 aa28.92■■■□□ 2.22
LINC01578-208ENST00000557147 COL14A1Q05707 1796 aaKnown RBP28.91■■■□□ 2.22
LINC01578-208ENST00000557147 CABP2Q9NPB3 220 aa28.91■■■□□ 2.22
LINC01578-208ENST00000557147 PPIP5K1Q6PFW1 1433 aa28.91■■■□□ 2.22
LINC01578-208ENST00000557147 TRPM1Q7Z4N2 1603 aa28.9■■■□□ 2.22
LINC01578-208ENST00000557147 EVC2Q86UK5 1308 aa28.9■■■□□ 2.22
LINC01578-208ENST00000557147 CRYBG1Q9Y4K1 1723 aa28.87■■■□□ 2.21
LINC01578-208ENST00000557147 ABTB2Q8N961 1025 aa28.87■■■□□ 2.21
LINC01578-208ENST00000557147 KIAA0232Q92628 1395 aa28.86■■■□□ 2.21
LINC01578-208ENST00000557147 NLRP13Q86W25 1043 aa28.85■■■□□ 2.21
LINC01578-208ENST00000557147 QRICH2Q9H0J4 1663 aa28.85■■■□□ 2.21
LINC01578-208ENST00000557147 NRAPQ86VF7 1730 aa28.84■■■□□ 2.21
LINC01578-208ENST00000557147 TRIM26Q12899 539 aaPredicted RBP28.84■■■□□ 2.21
LINC01578-208ENST00000557147 KRT27Q7Z3Y8 459 aa28.84■■■□□ 2.21
LINC01578-208ENST00000557147 CABP1Q9NZU7 370 aa28.84■■■□□ 2.21
LINC01578-208ENST00000557147 USP19O94966 1318 aa28.84■■■□□ 2.21
LINC01578-208ENST00000557147 SPATA31A5Q5VU36 1347 aa28.84■■■□□ 2.21
LINC01578-208ENST00000557147 SPATA31A7Q8IWB4 1347 aa28.84■■■□□ 2.21
LINC01578-208ENST00000557147 NUTM2GQ5VZR2 741 aa28.83■■■□□ 2.21
LINC01578-208ENST00000557147 BLMP54132 1417 aaPredicted RBP28.82■■■□□ 2.2
LINC01578-208ENST00000557147 CPDO75976 1380 aa28.81■■■□□ 2.2
LINC01578-208ENST00000557147 ZC3H6P61129 1189 aaKnown RBP28.8■■■□□ 2.2
LINC01578-208ENST00000557147 FAM98CQ17RN3 349 aaKnown RBP28.8■■■□□ 2.2
LINC01578-208ENST00000557147 USP6P35125 1406 aa28.79■■■□□ 2.2
LINC01578-208ENST00000557147 ZNF692Q9BU19 519 aaPredicted RBP28.79■■■□□ 2.2
LINC01578-208ENST00000557147 TONSLQ96HA7 1378 aa28.78■■■□□ 2.2
LINC01578-208ENST00000557147 SBNO2Q9Y2G9 1366 aa28.78■■■□□ 2.2
LINC01578-208ENST00000557147 PHRF1Q9P1Y6 1649 aaKnown RBP28.77■■■□□ 2.2
LINC01578-208ENST00000557147 GCP02774 474 aa28.77■■■□□ 2.2
LINC01578-208ENST00000557147 CHRNA2Q15822 529 aa28.77■■■□□ 2.2
LINC01578-208ENST00000557147 A0A0G2JS52 829 aa28.76■■■□□ 2.19
LINC01578-208ENST00000557147 MYT1Q01538 1121 aa28.76■■■□□ 2.19
LINC01578-208ENST00000557147 SPATA31A1Q5TZJ5 1347 aa28.75■■■□□ 2.19
LINC01578-208ENST00000557147 SF3B2Q13435 895 aaKnown RBP28.75■■■□□ 2.19
LINC01578-208ENST00000557147 CARD11Q9BXL7 1154 aa28.75■■■□□ 2.19
LINC01578-208ENST00000557147 SSH2Q76I76 1423 aa28.75■■■□□ 2.19
LINC01578-208ENST00000557147 BRWD3Q6RI45 1802 aa28.73■■■□□ 2.19
LINC01578-208ENST00000557147 EVA1CP58658 441 aa28.72■■■□□ 2.19
LINC01578-208ENST00000557147 ZRANB1Q9UGI0 708 aa28.72■■■□□ 2.19
LINC01578-208ENST00000557147 EP400Q96L91 3159 aa28.72■■■□□ 2.19
LINC01578-208ENST00000557147 NRKQ7Z2Y5 1582 aa28.71■■■□□ 2.19
LINC01578-208ENST00000557147 NLRP6P59044 892 aa28.71■■■□□ 2.19
LINC01578-208ENST00000557147 STRN4Q9NRL3 753 aa28.71■■■□□ 2.19
LINC01578-208ENST00000557147 BARGINQ6ZT62 677 aa28.68■■■□□ 2.18
LINC01578-208ENST00000557147 TTC21AQ8NDW8 1320 aa28.68■■■□□ 2.18
LINC01578-208ENST00000557147 CPSF1Q10570 1443 aaKnown RBP28.67■■■□□ 2.18
LINC01578-208ENST00000557147 TTC21BQ7Z4L5 1316 aa28.67■■■□□ 2.18
LINC01578-208ENST00000557147 CAMTA1Q9Y6Y1 1673 aa28.66■■■□□ 2.18
LINC01578-208ENST00000557147 THSD7AQ9UPZ6 1657 aa28.65■■■□□ 2.18
LINC01578-208ENST00000557147 PUS7Q96PZ0 661 aaKnown RBP28.65■■■□□ 2.18
LINC01578-208ENST00000557147 THRAP3Q9Y2W1 955 aaKnown RBP28.65■■■□□ 2.18
LINC01578-208ENST00000557147 SLIT3O75094 1523 aa28.64■■■□□ 2.18
LINC01578-208ENST00000557147 AATKQ6ZMQ8 1374 aa28.64■■■□□ 2.18
LINC01578-208ENST00000557147 LMO7Q8WWI1 1683 aa28.63■■■□□ 2.17
LINC01578-208ENST00000557147 SLC24A1O60721 1099 aa28.62■■■□□ 2.17
LINC01578-208ENST00000557147 LARP1Q6PKG0 1096 aaKnown RBP28.62■■■□□ 2.17
LINC01578-208ENST00000557147 DEFB132Q7Z7B7 95 aa28.62■■■□□ 2.17
LINC01578-208ENST00000557147 TCP11L2Q8N4U5 519 aa28.62■■■□□ 2.17
LINC01578-208ENST00000557147 KCNH5Q8NCM2 988 aa28.62■■■□□ 2.17
LINC01578-208ENST00000557147 BAG6P46379 1132 aa28.61■■■□□ 2.17
LINC01578-208ENST00000557147 KTN1Q86UP2 1357 aaKnown RBP28.6■■■□□ 2.17
LINC01578-208ENST00000557147 USP35Q9P2H5 1018 aa28.59■■■□□ 2.17
LINC01578-208ENST00000557147 COL5A2P05997 1499 aaPredicted RBP28.59■■■□□ 2.17
LINC01578-208ENST00000557147 FAM196AQ6ZSG2 479 aa28.58■■■□□ 2.17
LINC01578-208ENST00000557147 PIK3C2AO00443 1686 aa28.56■■■□□ 2.16
LINC01578-208ENST00000557147 ARHGEF25Q86VW2 580 aa28.56■■■□□ 2.16
LINC01578-208ENST00000557147 CRB1P82279 1406 aa28.54■■■□□ 2.16
LINC01578-208ENST00000557147 PDE3BQ13370 1112 aa28.54■■■□□ 2.16
LINC01578-208ENST00000557147 AKAP12Q02952 1782 aa28.54■■■□□ 2.16
LINC01578-208ENST00000557147 FAM182BQ5T319 152 aa28.53■■■□□ 2.16
LINC01578-208ENST00000557147 HDGFL2Q7Z4V5 671 aaPredicted RBP28.53■■■□□ 2.16
LINC01578-208ENST00000557147 DISP2A7MBM2 1401 aa28.52■■■□□ 2.16
LINC01578-208ENST00000557147 C11orf95C9JLR9 678 aaPredicted RBP28.52■■■□□ 2.16
LINC01578-208ENST00000557147 USP31Q70CQ4 1352 aa28.51■■■□□ 2.16
LINC01578-208ENST00000557147 ZBTB7CA1YPR0 619 aa28.51■■■□□ 2.15
LINC01578-208ENST00000557147 TMC1Q8TDI8 760 aa28.51■■■□□ 2.15
LINC01578-208ENST00000557147 TERF2IPQ9NYB0 399 aa28.51■■■□□ 2.15
LINC01578-208ENST00000557147 TESK2Q96S53 571 aa28.5■■■□□ 2.15
LINC01578-208ENST00000557147 CD163L1Q9NR16 1453 aa28.49■■■□□ 2.15
LINC01578-208ENST00000557147 SLC12A5Q9H2X9 1139 aa28.49■■■□□ 2.15
LINC01578-208ENST00000557147 NINLQ9Y2I6 1382 aa28.49■■■□□ 2.15
LINC01578-208ENST00000557147 WDR17Q8IZU2 1322 aa28.48■■■□□ 2.15
LINC01578-208ENST00000557147 ST20-MTHFSA0A0A6YYL1 179 aa28.48■■■□□ 2.15
LINC01578-208ENST00000557147 AXIN2Q9Y2T1 843 aa28.48■■■□□ 2.15
LINC01578-208ENST00000557147 TOM1L2Q6ZVM7 507 aa28.47■■■□□ 2.15
LINC01578-208ENST00000557147 TIMELESSQ9UNS1 1208 aa28.47■■■□□ 2.15
LINC01578-208ENST00000557147 RGPD1P0DJD0 1748 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms