RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
ATXN3-246ENST00000557030 SIAH2O43255 324 aa9.46□□□□□ -0.9
ATXN3-246ENST00000557030 CTDSPL2Q05D32 466 aa9.45□□□□□ -0.9
ATXN3-246ENST00000557030 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-246ENST00000557030 BAP1Q92560 729 aa9.45□□□□□ -0.9
ATXN3-246ENST00000557030 AVPP01185 164 aa9.44□□□□□ -0.9
ATXN3-246ENST00000557030 MYT1Q01538 1121 aa9.44□□□□□ -0.9
ATXN3-246ENST00000557030 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
ATXN3-246ENST00000557030 SNIP1Q8TAD8 396 aaKnown RBP9.43□□□□□ -0.9
ATXN3-246ENST00000557030 SMPD1P17405 629 aa9.42□□□□□ -0.9
ATXN3-246ENST00000557030 CTHP32929 405 aa9.42□□□□□ -0.9
ATXN3-246ENST00000557030 CYP4X1Q8N118 509 aa9.42□□□□□ -0.9
ATXN3-246ENST00000557030 TSC1Q92574 1164 aa9.42□□□□□ -0.9
ATXN3-246ENST00000557030 FAM187AA6NFU0 413 aa9.41□□□□□ -0.9
ATXN3-246ENST00000557030 RFC5P40937 340 aa9.41□□□□□ -0.9
ATXN3-246ENST00000557030 PKDCCQ504Y2 493 aa9.41□□□□□ -0.9
ATXN3-246ENST00000557030 CRIPAKQ8N1N5 446 aa9.41□□□□□ -0.9
ATXN3-246ENST00000557030 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
ATXN3-246ENST00000557030 MPNDQ8N594 471 aa9.4□□□□□ -0.9
ATXN3-246ENST00000557030 LRRN4Q8WUT4 740 aa9.4□□□□□ -0.9
ATXN3-246ENST00000557030 J3QL48 77 aa9.39□□□□□ -0.91
ATXN3-246ENST00000557030 PCMTD1Q96MG8 357 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-246ENST00000557030 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
ATXN3-246ENST00000557030 SH3RF1Q7Z6J0 888 aa9.38□□□□□ -0.91
ATXN3-246ENST00000557030 EHBP1Q8NDI1 1231 aa9.38□□□□□ -0.91
ATXN3-246ENST00000557030 TTC24A2A3L6 582 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-246ENST00000557030 SMCPP49901 116 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-246ENST00000557030 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
ATXN3-246ENST00000557030 FOXJ1Q92949 421 aa9.37□□□□□ -0.91
ATXN3-246ENST00000557030 AAASQ9NRG9 546 aa9.37□□□□□ -0.91
ATXN3-246ENST00000557030 ARMC2Q8NEN0 867 aa9.36□□□□□ -0.91
ATXN3-246ENST00000557030 NISCHQ9Y2I1 1504 aa9.36□□□□□ -0.91
ATXN3-246ENST00000557030 AP1G2O75843 785 aa9.35□□□□□ -0.91
ATXN3-246ENST00000557030 USP17L8P0C7I0 530 aa9.35□□□□□ -0.91
ATXN3-246ENST00000557030 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
ATXN3-246ENST00000557030 HMX1Q9NP08 348 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-246ENST00000557030 CTC1Q2NKJ3 1217 aa9.34□□□□□ -0.91
ATXN3-246ENST00000557030 GPKOWQ92917 476 aaPredicted RBP eCLIP9.34□□□□□ -0.91
ATXN3-246ENST00000557030 C1QTNF2Q9BXJ5 285 aa9.34□□□□□ -0.91
ATXN3-246ENST00000557030 NR6A1Q15406 480 aa9.33□□□□□ -0.92
ATXN3-246ENST00000557030 TMEM259Q4ZIN3 620 aa9.33□□□□□ -0.92
ATXN3-246ENST00000557030 HPS1Q92902 700 aa9.33□□□□□ -0.92
ATXN3-246ENST00000557030 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
ATXN3-246ENST00000557030 ST8SIA5O15466 376 aa9.32□□□□□ -0.92
ATXN3-246ENST00000557030 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
ATXN3-246ENST00000557030 ALDH1A1P00352 501 aa9.31□□□□□ -0.92
ATXN3-246ENST00000557030 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
ATXN3-246ENST00000557030 BPHLQ86WA6 291 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-246ENST00000557030 TRIM34Q9BYJ4 488 aa9.31□□□□□ -0.92
ATXN3-246ENST00000557030 FKBPLQ9UIM3 349 aa9.31□□□□□ -0.92
ATXN3-246ENST00000557030 TLL2Q9Y6L7 1015 aa9.31□□□□□ -0.92
ATXN3-246ENST00000557030 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
ATXN3-246ENST00000557030 PDXDC2PQ6P474 469 aa9.3□□□□□ -0.92
ATXN3-246ENST00000557030 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
ATXN3-246ENST00000557030 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-246ENST00000557030 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
ATXN3-246ENST00000557030 ATP1B4Q9UN42 357 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-246ENST00000557030 SOCS7O14512 581 aa9.29□□□□□ -0.92
ATXN3-246ENST00000557030 FAM174AQ8TBP5 190 aa9.29□□□□□ -0.92
ATXN3-246ENST00000557030 DACH1Q9UI36 760 aa9.29□□□□□ -0.92
ATXN3-246ENST00000557030 AXIN1O15169 862 aa9.28□□□□□ -0.92
ATXN3-246ENST00000557030 BANK1Q8NDB2 785 aa9.28□□□□□ -0.92
ATXN3-246ENST00000557030 POTECB2RU33 542 aa9.26□□□□□ -0.93
ATXN3-246ENST00000557030 ADH1CP00326 375 aa9.26□□□□□ -0.93
ATXN3-246ENST00000557030 GRM5P41594 1212 aa9.26□□□□□ -0.93
ATXN3-246ENST00000557030 KLF16Q9BXK1 252 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-246ENST00000557030 GPSM3Q9Y4H4 160 aa9.26□□□□□ -0.93
ATXN3-246ENST00000557030 MAP4K5Q9Y4K4 846 aa9.26□□□□□ -0.93
ATXN3-246ENST00000557030 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
ATXN3-246ENST00000557030 GPR37L1O60883 481 aa9.24□□□□□ -0.93
ATXN3-246ENST00000557030 WASF2Q9Y6W5 498 aa9.24□□□□□ -0.93
ATXN3-246ENST00000557030 NNTQ13423 1086 aa9.23□□□□□ -0.93
ATXN3-246ENST00000557030 AGERQ15109 404 aa9.23□□□□□ -0.93
ATXN3-246ENST00000557030 NR3C2P08235 984 aa9.22□□□□□ -0.93
ATXN3-246ENST00000557030 NR5A1Q13285 461 aa9.22□□□□□ -0.93
ATXN3-246ENST00000557030 ZNF787Q6DD87 383 aa9.22□□□□□ -0.93
ATXN3-246ENST00000557030 MTMR14Q8NCE2 650 aa9.22□□□□□ -0.93
ATXN3-246ENST00000557030 ARHGAP9Q9BRR9 750 aa9.22□□□□□ -0.93
ATXN3-246ENST00000557030 MAGEB6P1A0A0J9YX57 407 aa9.21□□□□□ -0.94
ATXN3-246ENST00000557030 ATP13A2Q9NQ11 1180 aa9.21□□□□□ -0.94
ATXN3-246ENST00000557030 TIMP2P16035 220 aa9.2□□□□□ -0.94
ATXN3-246ENST00000557030 PTK2Q05397 1052 aa9.2□□□□□ -0.94
ATXN3-246ENST00000557030 CARD14Q9BXL6 1004 aa9.2□□□□□ -0.94
ATXN3-246ENST00000557030 SNRKQ9NRH2 765 aa9.2□□□□□ -0.94
ATXN3-246ENST00000557030 GMPR2Q9P2T1 348 aaKnown RBP9.19□□□□□ -0.94
ATXN3-246ENST00000557030 CAPN5O15484 640 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-246ENST00000557030 ARID5BQ14865 1188 aa9.18□□□□□ -0.94
ATXN3-246ENST00000557030 PNMA1Q8ND90 353 aa9.18□□□□□ -0.94
ATXN3-246ENST00000557030 ADAM32Q8TC27 787 aa9.18□□□□□ -0.94
ATXN3-246ENST00000557030 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
ATXN3-246ENST00000557030 VASH1Q7L8A9 365 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-246ENST00000557030 ZBTB33Q86T24 672 aa9.16□□□□□ -0.94
ATXN3-246ENST00000557030 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
ATXN3-246ENST00000557030 FSHRP23945 695 aa9.15□□□□□ -0.94
ATXN3-246ENST00000557030 WDR4P57081 412 aaKnown RBP9.15□□□□□ -0.94
ATXN3-246ENST00000557030 ITPKCQ96DU7 683 aa9.15□□□□□ -0.94
ATXN3-246ENST00000557030 TRIM47Q96LD4 638 aa9.14□□□□□ -0.95
ATXN3-246ENST00000557030 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
ATXN3-246ENST00000557030 FBXO45P0C2W1 286 aa9.13□□□□□ -0.95
ATXN3-246ENST00000557030 SLC10A4Q96EP9 437 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms