RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 ROCK2O75116 1388 aaKnown RBP32.47■■■□□ 2.79
TMEM260-214ENST00000556975 QRICH2Q9H0J4 1663 aa32.46■■■□□ 2.79
TMEM260-214ENST00000556975 FAM83GA6ND36 823 aa32.46■■■□□ 2.79
TMEM260-214ENST00000556975 SRPK2P78362 688 aaKnown RBP32.46■■■□□ 2.79
TMEM260-214ENST00000556975 NWD2Q9ULI1 1742 aa32.45■■■□□ 2.78
TMEM260-214ENST00000556975 CABP2Q9NPB3 220 aa32.43■■■□□ 2.78
TMEM260-214ENST00000556975 PLCH1Q4KWH8 1693 aa32.41■■■□□ 2.78
TMEM260-214ENST00000556975 VPS72Q15906 364 aa32.41■■■□□ 2.78
TMEM260-214ENST00000556975 RALGAPBQ86X10 1494 aa32.41■■■□□ 2.78
TMEM260-214ENST00000556975 CRYBG1Q9Y4K1 1723 aa32.4■■■□□ 2.78
TMEM260-214ENST00000556975 PPIP5K1Q6PFW1 1433 aa32.4■■■□□ 2.78
TMEM260-214ENST00000556975 GLI3P10071 1580 aa32.39■■■□□ 2.78
TMEM260-214ENST00000556975 TONSLQ96HA7 1378 aa32.38■■■□□ 2.77
TMEM260-214ENST00000556975 EVC2Q86UK5 1308 aa32.38■■■□□ 2.77
TMEM260-214ENST00000556975 ATAD2Q6PL18 1390 aa32.37■■■□□ 2.77
TMEM260-214ENST00000556975 COL14A1Q05707 1796 aaKnown RBP32.35■■■□□ 2.77
TMEM260-214ENST00000556975 BRD4O60885 1362 aaPredicted RBP32.34■■■□□ 2.77
TMEM260-214ENST00000556975 ONECUT3O60422 494 aaPredicted RBP32.33■■■□□ 2.77
TMEM260-214ENST00000556975 BTG4Q9NY30 223 aa32.33■■■□□ 2.77
TMEM260-214ENST00000556975 CABP1Q9NZU7 370 aa32.33■■■□□ 2.77
TMEM260-214ENST00000556975 NRAPQ86VF7 1730 aa32.3■■■□□ 2.76
TMEM260-214ENST00000556975 ABTB2Q8N961 1025 aa32.3■■■□□ 2.76
TMEM260-214ENST00000556975 NUTM2GQ5VZR2 741 aa32.29■■■□□ 2.76
TMEM260-214ENST00000556975 CARD11Q9BXL7 1154 aa32.29■■■□□ 2.76
TMEM260-214ENST00000556975 PRDM11Q9NQV5 511 aa32.29■■■□□ 2.76
TMEM260-214ENST00000556975 CCDC9Q9Y3X0 531 aaKnown RBP32.28■■■□□ 2.76
TMEM260-214ENST00000556975 PHRF1Q9P1Y6 1649 aaKnown RBP32.28■■■□□ 2.76
TMEM260-214ENST00000556975 SBNO2Q9Y2G9 1366 aa32.28■■■□□ 2.76
TMEM260-214ENST00000556975 KIAA0232Q92628 1395 aa32.26■■■□□ 2.75
TMEM260-214ENST00000556975 EP400Q96L91 3159 aa32.26■■■□□ 2.75
TMEM260-214ENST00000556975 SEPT12Q8IYM1 358 aa32.25■■■□□ 2.75
TMEM260-214ENST00000556975 USP6P35125 1406 aa32.25■■■□□ 2.75
TMEM260-214ENST00000556975 USP19O94966 1318 aa32.25■■■□□ 2.75
TMEM260-214ENST00000556975 NLRP13Q86W25 1043 aa32.24■■■□□ 2.75
TMEM260-214ENST00000556975 ZC3H6P61129 1189 aaKnown RBP32.22■■■□□ 2.75
TMEM260-214ENST00000556975 SSH2Q76I76 1423 aa32.22■■■□□ 2.75
TMEM260-214ENST00000556975 CCDC125Q86Z20 511 aa32.21■■■□□ 2.75
TMEM260-214ENST00000556975 ZNF692Q9BU19 519 aaPredicted RBP32.21■■■□□ 2.75
TMEM260-214ENST00000556975 BRWD3Q6RI45 1802 aa32.19■■■□□ 2.74
TMEM260-214ENST00000556975 CHRNA2Q15822 529 aa32.19■■■□□ 2.74
TMEM260-214ENST00000556975 SPATA31A5Q5VU36 1347 aa32.19■■■□□ 2.74
TMEM260-214ENST00000556975 SPATA31A7Q8IWB4 1347 aa32.19■■■□□ 2.74
TMEM260-214ENST00000556975 CPDO75976 1380 aa32.19■■■□□ 2.74
TMEM260-214ENST00000556975 NRKQ7Z2Y5 1582 aa32.18■■■□□ 2.74
TMEM260-214ENST00000556975 GCP02774 474 aa32.17■■■□□ 2.74
TMEM260-214ENST00000556975 SRCAPQ6ZRS2 3230 aa32.16■■■□□ 2.74
TMEM260-214ENST00000556975 FAM98CQ17RN3 349 aaKnown RBP32.15■■■□□ 2.74
TMEM260-214ENST00000556975 NLRP6P59044 892 aa32.14■■■□□ 2.74
TMEM260-214ENST00000556975 CPSF1Q10570 1443 aaKnown RBP32.13■■■□□ 2.73
TMEM260-214ENST00000556975 KRT27Q7Z3Y8 459 aa32.13■■■□□ 2.73
TMEM260-214ENST00000556975 AKAP12Q02952 1782 aa32.12■■■□□ 2.73
TMEM260-214ENST00000556975 TTC21BQ7Z4L5 1316 aa32.11■■■□□ 2.73
TMEM260-214ENST00000556975 SPATA31A1Q5TZJ5 1347 aa32.1■■■□□ 2.73
TMEM260-214ENST00000556975 PUS7Q96PZ0 661 aaKnown RBP32.09■■■□□ 2.73
TMEM260-214ENST00000556975 SLIT3O75094 1523 aa32.09■■■□□ 2.73
TMEM260-214ENST00000556975 CAMTA1Q9Y6Y1 1673 aa32.08■■■□□ 2.73
TMEM260-214ENST00000556975 TTC21AQ8NDW8 1320 aa32.08■■■□□ 2.73
TMEM260-214ENST00000556975 STRN4Q9NRL3 753 aa32.08■■■□□ 2.73
TMEM260-214ENST00000556975 PIK3C2AO00443 1686 aa32.08■■■□□ 2.73
TMEM260-214ENST00000556975 LMO7Q8WWI1 1683 aa32.08■■■□□ 2.73
TMEM260-214ENST00000556975 EVA1CP58658 441 aa32.07■■■□□ 2.72
TMEM260-214ENST00000556975 BLMP54132 1417 aaPredicted RBP32.07■■■□□ 2.72
TMEM260-214ENST00000556975 A0A0G2JS52 829 aa32.06■■■□□ 2.72
TMEM260-214ENST00000556975 MYT1Q01538 1121 aa32.06■■■□□ 2.72
TMEM260-214ENST00000556975 KTN1Q86UP2 1357 aaKnown RBP32.06■■■□□ 2.72
TMEM260-214ENST00000556975 ZRANB1Q9UGI0 708 aa32.04■■■□□ 2.72
TMEM260-214ENST00000556975 THSD7AQ9UPZ6 1657 aa32.04■■■□□ 2.72
TMEM260-214ENST00000556975 CLSPNQ9HAW4 1339 aa32.03■■■□□ 2.72
TMEM260-214ENST00000556975 SLC24A1O60721 1099 aa32.03■■■□□ 2.72
TMEM260-214ENST00000556975 TESK2Q96S53 571 aa32.03■■■□□ 2.72
TMEM260-214ENST00000556975 ST20-MTHFSA0A0A6YYL1 179 aa32.02■■■□□ 2.72
TMEM260-214ENST00000556975 TIMELESSQ9UNS1 1208 aa32.02■■■□□ 2.72
TMEM260-214ENST00000556975 AATKQ6ZMQ8 1374 aa32.01■■■□□ 2.71
TMEM260-214ENST00000556975 MON2Q7Z3U7 1717 aa32■■■□□ 2.71
TMEM260-214ENST00000556975 CD163L1Q9NR16 1453 aa32■■■□□ 2.71
TMEM260-214ENST00000556975 LARP1Q6PKG0 1096 aaKnown RBP32■■■□□ 2.71
TMEM260-214ENST00000556975 BARGINQ6ZT62 677 aa32■■■□□ 2.71
TMEM260-214ENST00000556975 KCNH5Q8NCM2 988 aa32■■■□□ 2.71
TMEM260-214ENST00000556975 SLC12A5Q9H2X9 1139 aa31.99■■■□□ 2.71
TMEM260-214ENST00000556975 TMC1Q8TDI8 760 aa31.98■■■□□ 2.71
TMEM260-214ENST00000556975 COL5A2P05997 1499 aaPredicted RBP31.97■■■□□ 2.71
TMEM260-214ENST00000556975 SF3B2Q13435 895 aaKnown RBP31.95■■■□□ 2.71
TMEM260-214ENST00000556975 HDGFL2Q7Z4V5 671 aaPredicted RBP31.95■■■□□ 2.71
TMEM260-214ENST00000556975 ARHGEF25Q86VW2 580 aa31.95■■■□□ 2.71
TMEM260-214ENST00000556975 TCP11L2Q8N4U5 519 aa31.95■■■□□ 2.71
TMEM260-214ENST00000556975 PCGF6Q9BYE7 350 aa31.95■■■□□ 2.71
TMEM260-214ENST00000556975 USP35Q9P2H5 1018 aa31.95■■■□□ 2.71
TMEM260-214ENST00000556975 THRAP3Q9Y2W1 955 aaKnown RBP31.95■■■□□ 2.71
TMEM260-214ENST00000556975 USP31Q70CQ4 1352 aa31.94■■■□□ 2.7
TMEM260-214ENST00000556975 COL18A1P39060 1754 aa31.94■■■□□ 2.7
TMEM260-214ENST00000556975 TERF2IPQ9NYB0 399 aa31.93■■■□□ 2.7
TMEM260-214ENST00000556975 ZBTB7CA1YPR0 619 aa31.91■■■□□ 2.7
TMEM260-214ENST00000556975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.91■■■□□ 2.7
TMEM260-214ENST00000556975 NINLQ9Y2I6 1382 aa31.91■■■□□ 2.7
TMEM260-214ENST00000556975 DEFB132Q7Z7B7 95 aa31.9■■■□□ 2.7
TMEM260-214ENST00000556975 AXIN2Q9Y2T1 843 aa31.9■■■□□ 2.7
TMEM260-214ENST00000556975 CRB1P82279 1406 aa31.9■■■□□ 2.7
TMEM260-214ENST00000556975 EDC4Q6P2E9 1401 aaKnown RBP31.89■■■□□ 2.7
TMEM260-214ENST00000556975 USP54Q70EL1 1684 aa31.89■■■□□ 2.7
TMEM260-214ENST00000556975 FAM182BQ5T319 152 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms