RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 ZNF526Q8TF50 670 aaPredicted RBP19.45■□□□□ 0.7
ABCD4-226ENST00000556971 E9PCH4 1651 aa19.45■□□□□ 0.7
ABCD4-226ENST00000556971 HFM1A2PYH4 1435 aa19.44■□□□□ 0.7
ABCD4-226ENST00000556971 BCL11BQ9C0K0 894 aaPredicted RBP19.44■□□□□ 0.7
ABCD4-226ENST00000556971 MTFR1LQ9H019 292 aa19.44■□□□□ 0.7
ABCD4-226ENST00000556971 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
ABCD4-226ENST00000556971 KLHL34Q8N239 644 aa19.41■□□□□ 0.7
ABCD4-226ENST00000556971 WWC3Q9ULE0 1092 aa19.41■□□□□ 0.7
ABCD4-226ENST00000556971 SPATA31A1Q5TZJ5 1347 aa19.41■□□□□ 0.7
ABCD4-226ENST00000556971 PRAG1Q86YV5 1406 aa19.41■□□□□ 0.7
ABCD4-226ENST00000556971 ZNF326Q5BKZ1 582 aaKnown RBP19.4■□□□□ 0.7
ABCD4-226ENST00000556971 NAIPQ13075 1403 aa19.4■□□□□ 0.7
ABCD4-226ENST00000556971 ARHGEF10O15013 1369 aa19.39■□□□□ 0.69
ABCD4-226ENST00000556971 ANKRD30AQ9BXX3 1397 aa19.39■□□□□ 0.69
ABCD4-226ENST00000556971 DAPK1P53355 1430 aa19.39■□□□□ 0.69
ABCD4-226ENST00000556971 TECPR2O15040 1411 aa19.38■□□□□ 0.69
ABCD4-226ENST00000556971 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
ABCD4-226ENST00000556971 SBNO1A3KN83 1393 aa19.34■□□□□ 0.69
ABCD4-226ENST00000556971 STK32BQ9NY57 414 aa19.34■□□□□ 0.69
ABCD4-226ENST00000556971 WDR90Q96KV7 1748 aa19.34■□□□□ 0.69
ABCD4-226ENST00000556971 YBX3P16989 372 aaKnown RBP eCLIP19.33■□□□□ 0.68
ABCD4-226ENST00000556971 PSME1Q06323 249 aa19.33■□□□□ 0.68
ABCD4-226ENST00000556971 USP35Q9P2H5 1018 aa19.33■□□□□ 0.68
ABCD4-226ENST00000556971 FMN2Q9NZ56 1722 aa19.33■□□□□ 0.68
ABCD4-226ENST00000556971 ADCY9O60503 1353 aa19.32■□□□□ 0.68
ABCD4-226ENST00000556971 PLSCR1O15162 318 aa19.32■□□□□ 0.68
ABCD4-226ENST00000556971 JMYQ8N9B5 988 aa19.31■□□□□ 0.68
ABCD4-226ENST00000556971 PROM2Q8N271 834 aa19.3■□□□□ 0.68
ABCD4-226ENST00000556971 KLRG1Q96E93 195 aa19.3■□□□□ 0.68
ABCD4-226ENST00000556971 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
ABCD4-226ENST00000556971 KIF3CO14782 793 aa19.29■□□□□ 0.68
ABCD4-226ENST00000556971 GRIN3BO60391 1043 aa19.29■□□□□ 0.68
ABCD4-226ENST00000556971 SLC15A2Q16348 729 aa19.29■□□□□ 0.68
ABCD4-226ENST00000556971 NLGN2Q8NFZ4 835 aa19.29■□□□□ 0.68
ABCD4-226ENST00000556971 AATKQ6ZMQ8 1374 aa19.29■□□□□ 0.68
ABCD4-226ENST00000556971 SBF2Q86WG5 1849 aa19.28■□□□□ 0.68
ABCD4-226ENST00000556971 PCNTO95613 3336 aa19.27■□□□□ 0.68
ABCD4-226ENST00000556971 RGPD8O14715 1765 aaPredicted RBP19.27■□□□□ 0.68
ABCD4-226ENST00000556971 HTRA3P83110 453 aa19.27■□□□□ 0.68
ABCD4-226ENST00000556971 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.68
ABCD4-226ENST00000556971 TNS2Q63HR2 1409 aa19.26■□□□□ 0.67
ABCD4-226ENST00000556971 PTF1AQ7RTS3 328 aa19.26■□□□□ 0.67
ABCD4-226ENST00000556971 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
ABCD4-226ENST00000556971 PEAK1Q9H792 1746 aa19.25■□□□□ 0.67
ABCD4-226ENST00000556971 BARGINQ6ZT62 677 aa19.25■□□□□ 0.67
ABCD4-226ENST00000556971 PHF8Q9UPP1 1060 aa19.25■□□□□ 0.67
ABCD4-226ENST00000556971 OVOS2A0A0G2JMS6 1433 aa19.23■□□□□ 0.67
ABCD4-226ENST00000556971 OVOS2A0A0J9YW53 1432 aa19.23■□□□□ 0.67
ABCD4-226ENST00000556971 OVOS2Q6IE36 1432 aa19.23■□□□□ 0.67
ABCD4-226ENST00000556971 NRXN1Q9ULB1 1477 aa19.22■□□□□ 0.67
ABCD4-226ENST00000556971 CRYBG1Q9Y4K1 1723 aa19.22■□□□□ 0.67
ABCD4-226ENST00000556971 FAM161AQ3B820 660 aa19.21■□□□□ 0.67
ABCD4-226ENST00000556971 CHRNA2Q15822 529 aa19.2■□□□□ 0.66
ABCD4-226ENST00000556971 WAPLQ7Z5K2 1190 aa19.2■□□□□ 0.66
ABCD4-226ENST00000556971 TOPAZ1Q8N9V7 1692 aa19.2■□□□□ 0.66
ABCD4-226ENST00000556971 ALS2Q96Q42 1657 aa19.2■□□□□ 0.66
ABCD4-226ENST00000556971 TRPM3Q9HCF6 1732 aaPredicted RBP19.2■□□□□ 0.66
ABCD4-226ENST00000556971 PARP4Q9UKK3 1724 aaKnown RBP19.2■□□□□ 0.66
ABCD4-226ENST00000556971 TXNRD1Q16881 649 aa19.19■□□□□ 0.66
ABCD4-226ENST00000556971 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
ABCD4-226ENST00000556971 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
ABCD4-226ENST00000556971 KIAA0232Q92628 1395 aa19.17■□□□□ 0.66
ABCD4-226ENST00000556971 PLEKHH1Q9ULM0 1364 aa19.17■□□□□ 0.66
ABCD4-226ENST00000556971 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
ABCD4-226ENST00000556971 DHX57Q6P158 1386 aaKnown RBP19.16■□□□□ 0.66
ABCD4-226ENST00000556971 HSPA1AP0DMV8 641 aaKnown RBP19.15■□□□□ 0.66
ABCD4-226ENST00000556971 HSPA1BP0DMV9 641 aaKnown RBP19.15■□□□□ 0.66
ABCD4-226ENST00000556971 TCP11L2Q8N4U5 519 aa19.15■□□□□ 0.66
ABCD4-226ENST00000556971 POLD1P28340 1107 aa19.13■□□□□ 0.65
ABCD4-226ENST00000556971 ATP7BP35670 1465 aa19.13■□□□□ 0.65
ABCD4-226ENST00000556971 TOMM70O94826 608 aa19.12■□□□□ 0.65
ABCD4-226ENST00000556971 CLTCL1P53675 1640 aa19.11■□□□□ 0.65
ABCD4-226ENST00000556971 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
ABCD4-226ENST00000556971 LARP1Q6PKG0 1096 aaKnown RBP19.11■□□□□ 0.65
ABCD4-226ENST00000556971 STK26Q9P289 416 aa19.11■□□□□ 0.65
ABCD4-226ENST00000556971 LRRC37A3O60309 1634 aa19.11■□□□□ 0.65
ABCD4-226ENST00000556971 PAPPAQ13219 1627 aa19.11■□□□□ 0.65
ABCD4-226ENST00000556971 EVA1CP58658 441 aa19.1■□□□□ 0.65
ABCD4-226ENST00000556971 PMFBP1Q8TBY8 1022 aa19.1■□□□□ 0.65
ABCD4-226ENST00000556971 COL24A1Q17RW2 1714 aa19.09■□□□□ 0.65
ABCD4-226ENST00000556971 ARHGEF28Q8N1W1 1705 aaKnown RBP19.09■□□□□ 0.65
ABCD4-226ENST00000556971 TULP4Q9NRJ4 1543 aa19.06■□□□□ 0.64
ABCD4-226ENST00000556971 VGFO15240 615 aaPredicted RBP19.06■□□□□ 0.64
ABCD4-226ENST00000556971 PHRF1Q9P1Y6 1649 aaKnown RBP19.05■□□□□ 0.64
ABCD4-226ENST00000556971 ZNF827Q17R98 1081 aa19.05■□□□□ 0.64
ABCD4-226ENST00000556971 KIF1BO60333 1816 aa19.04■□□□□ 0.64
ABCD4-226ENST00000556971 KNDC1Q76NI1 1749 aa19.04■□□□□ 0.64
ABCD4-226ENST00000556971 ZC3H6P61129 1189 aaKnown RBP19.03■□□□□ 0.64
ABCD4-226ENST00000556971 THRAP3Q9Y2W1 955 aaKnown RBP19.03■□□□□ 0.64
ABCD4-226ENST00000556971 NUP155O75694 1391 aa19■□□□□ 0.63
ABCD4-226ENST00000556971 GPRASP1Q5JY77 1395 aa19■□□□□ 0.63
ABCD4-226ENST00000556971 AKAP12Q02952 1782 aa19■□□□□ 0.63
ABCD4-226ENST00000556971 DDB1Q16531 1140 aa18.98■□□□□ 0.63
ABCD4-226ENST00000556971 SLC16A10Q8TF71 515 aa18.98■□□□□ 0.63
ABCD4-226ENST00000556971 PAK3O75914 559 aaPredicted RBP18.97■□□□□ 0.63
ABCD4-226ENST00000556971 RBM46Q8TBY0 533 aaKnown RBP18.97■□□□□ 0.63
ABCD4-226ENST00000556971 NMRK2Q9NPI5 230 aa18.97■□□□□ 0.63
ABCD4-226ENST00000556971 LMO7Q8WWI1 1683 aa18.97■□□□□ 0.63
ABCD4-226ENST00000556971 ACIN1Q9UKV3 1341 aaKnown RBP18.97■□□□□ 0.63
ABCD4-226ENST00000556971 KIAA1210Q9ULL0 1709 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms