RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
LINC00648-203ENST00000556923 BAP1Q92560 729 aa10.97□□□□□ -0.65
LINC00648-203ENST00000556923 J3QL48 77 aa10.96□□□□□ -0.65
LINC00648-203ENST00000556923 ST8SIA5O15466 376 aa10.96□□□□□ -0.65
LINC00648-203ENST00000556923 AVPP01185 164 aa10.96□□□□□ -0.65
LINC00648-203ENST00000556923 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
LINC00648-203ENST00000556923 PROCA1Q8NCQ7 364 aaPredicted RBP10.95□□□□□ -0.66
LINC00648-203ENST00000556923 AAASQ9NRG9 546 aa10.95□□□□□ -0.66
LINC00648-203ENST00000556923 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
LINC00648-203ENST00000556923 ZNF511Q8NB15 262 aa10.94□□□□□ -0.66
LINC00648-203ENST00000556923 EHBP1Q8NDI1 1231 aa10.94□□□□□ -0.66
LINC00648-203ENST00000556923 NEUROD2Q15784 382 aa10.93□□□□□ -0.66
LINC00648-203ENST00000556923 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
LINC00648-203ENST00000556923 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
LINC00648-203ENST00000556923 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC00648-203ENST00000556923 SIAH2O43255 324 aa10.92□□□□□ -0.66
LINC00648-203ENST00000556923 ZNF787Q6DD87 383 aa10.9□□□□□ -0.66
LINC00648-203ENST00000556923 ALDH1A1P00352 501 aa10.89□□□□□ -0.67
LINC00648-203ENST00000556923 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
LINC00648-203ENST00000556923 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
LINC00648-203ENST00000556923 ATP1B4Q9UN42 357 aaPredicted RBP10.89□□□□□ -0.67
LINC00648-203ENST00000556923 AXIN1O15169 862 aa10.88□□□□□ -0.67
LINC00648-203ENST00000556923 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
LINC00648-203ENST00000556923 CTC1Q2NKJ3 1217 aa10.88□□□□□ -0.67
LINC00648-203ENST00000556923 PPP2R2DQ66LE6 453 aa10.88□□□□□ -0.67
LINC00648-203ENST00000556923 HPS1Q92902 700 aa10.88□□□□□ -0.67
LINC00648-203ENST00000556923 DACH1Q9UI36 760 aa10.88□□□□□ -0.67
LINC00648-203ENST00000556923 POTECB2RU33 542 aa10.87□□□□□ -0.67
LINC00648-203ENST00000556923 FOXJ1Q92949 421 aa10.87□□□□□ -0.67
LINC00648-203ENST00000556923 VARSP26640 1264 aaKnown RBP10.86□□□□□ -0.67
LINC00648-203ENST00000556923 TLL2Q9Y6L7 1015 aa10.86□□□□□ -0.67
LINC00648-203ENST00000556923 IL27Q8NEV9 243 aa10.85□□□□□ -0.67
LINC00648-203ENST00000556923 LRRN4Q8WUT4 740 aa10.84□□□□□ -0.67
LINC00648-203ENST00000556923 C4orf48Q5BLP8 95 aa10.83□□□□□ -0.68
LINC00648-203ENST00000556923 ARMC2Q8NEN0 867 aa10.82□□□□□ -0.68
LINC00648-203ENST00000556923 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
LINC00648-203ENST00000556923 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
LINC00648-203ENST00000556923 AP1G2O75843 785 aa10.81□□□□□ -0.68
LINC00648-203ENST00000556923 MPNDQ8N594 471 aa10.81□□□□□ -0.68
LINC00648-203ENST00000556923 FAM174AQ8TBP5 190 aa10.81□□□□□ -0.68
LINC00648-203ENST00000556923 RFC5P40937 340 aa10.79□□□□□ -0.68
LINC00648-203ENST00000556923 AGERQ15109 404 aa10.79□□□□□ -0.68
LINC00648-203ENST00000556923 NBPF14Q5TI25 921 aa10.79□□□□□ -0.68
LINC00648-203ENST00000556923 BPHLQ86WA6 291 aaPredicted RBP10.79□□□□□ -0.68
LINC00648-203ENST00000556923 PCMTD1Q96MG8 357 aaPredicted RBP10.79□□□□□ -0.68
LINC00648-203ENST00000556923 GMPR2Q9P2T1 348 aaKnown RBP10.79□□□□□ -0.68
LINC00648-203ENST00000556923 SH3BP5LQ7L8J4 393 aa10.78□□□□□ -0.68
LINC00648-203ENST00000556923 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
LINC00648-203ENST00000556923 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
LINC00648-203ENST00000556923 NR6A1Q15406 480 aa10.77□□□□□ -0.69
LINC00648-203ENST00000556923 CDK15Q96Q40 435 aa10.77□□□□□ -0.69
LINC00648-203ENST00000556923 USP17L8P0C7I0 530 aa10.76□□□□□ -0.69
LINC00648-203ENST00000556923 C1QTNF2Q9BXJ5 285 aa10.76□□□□□ -0.69
LINC00648-203ENST00000556923 ADH1CP00326 375 aa10.75□□□□□ -0.69
LINC00648-203ENST00000556923 NNTQ13423 1086 aa10.75□□□□□ -0.69
LINC00648-203ENST00000556923 ARID5BQ14865 1188 aa10.75□□□□□ -0.69
LINC00648-203ENST00000556923 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
LINC00648-203ENST00000556923 HMX1Q9NP08 348 aaPredicted RBP10.75□□□□□ -0.69
LINC00648-203ENST00000556923 FKBPLQ9UIM3 349 aa10.75□□□□□ -0.69
LINC00648-203ENST00000556923 EPS8L1Q8TE68 723 aa10.74□□□□□ -0.69
LINC00648-203ENST00000556923 MAGEB6P1A0A0J9YX57 407 aa10.73□□□□□ -0.69
LINC00648-203ENST00000556923 CAPN5O15484 640 aaPredicted RBP10.73□□□□□ -0.69
LINC00648-203ENST00000556923 ZNF775Q96BV0 537 aaPredicted RBP10.73□□□□□ -0.69
LINC00648-203ENST00000556923 CARD14Q9BXL6 1004 aa10.72□□□□□ -0.69
LINC00648-203ENST00000556923 C11orf95C9JLR9 678 aaPredicted RBP10.71□□□□□ -0.69
LINC00648-203ENST00000556923 BMP1P13497 986 aa10.71□□□□□ -0.69
LINC00648-203ENST00000556923 PRKCSHP14314 528 aaPredicted RBP10.71□□□□□ -0.69
LINC00648-203ENST00000556923 PDXDC2PQ6P474 469 aa10.71□□□□□ -0.69
LINC00648-203ENST00000556923 TRMT44Q8IYL2 757 aaKnown RBP10.71□□□□□ -0.69
LINC00648-203ENST00000556923 GRM5P41594 1212 aa10.7□□□□□ -0.7
LINC00648-203ENST00000556923 ZC3H4Q9UPT8 1303 aaKnown RBP10.69□□□□□ -0.7
LINC00648-203ENST00000556923 NR3C2P08235 984 aa10.69□□□□□ -0.7
LINC00648-203ENST00000556923 TIMP2P16035 220 aa10.69□□□□□ -0.7
LINC00648-203ENST00000556923 ERFEQ4G0M1 354 aa10.69□□□□□ -0.7
LINC00648-203ENST00000556923 TRIM46Q7Z4K8 759 aa10.69□□□□□ -0.7
LINC00648-203ENST00000556923 KLF16Q9BXK1 252 aaPredicted RBP10.69□□□□□ -0.7
LINC00648-203ENST00000556923 WDR4P57081 412 aaKnown RBP10.68□□□□□ -0.7
LINC00648-203ENST00000556923 NR5A1Q13285 461 aa10.68□□□□□ -0.7
LINC00648-203ENST00000556923 TMEM259Q4ZIN3 620 aa10.68□□□□□ -0.7
LINC00648-203ENST00000556923 TRIM47Q96LD4 638 aa10.68□□□□□ -0.7
LINC00648-203ENST00000556923 OCSTAMPQ9BR26 566 aa10.68□□□□□ -0.7
LINC00648-203ENST00000556923 ARHGAP9Q9BRR9 750 aa10.68□□□□□ -0.7
LINC00648-203ENST00000556923 MAP4K5Q9Y4K4 846 aa10.68□□□□□ -0.7
LINC00648-203ENST00000556923 SNRPBP14678 240 aaKnown RBP10.67□□□□□ -0.7
LINC00648-203ENST00000556923 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
LINC00648-203ENST00000556923 FSHRP23945 695 aa10.66□□□□□ -0.7
LINC00648-203ENST00000556923 VASH1Q7L8A9 365 aaPredicted RBP10.66□□□□□ -0.7
LINC00648-203ENST00000556923 TRIM34Q9BYJ4 488 aa10.66□□□□□ -0.7
LINC00648-203ENST00000556923 ZIC2O95409 532 aaPredicted RBP10.64□□□□□ -0.71
LINC00648-203ENST00000556923 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
LINC00648-203ENST00000556923 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
LINC00648-203ENST00000556923 PTK2Q05397 1052 aa10.63□□□□□ -0.71
LINC00648-203ENST00000556923 ZBTB33Q86T24 672 aa10.63□□□□□ -0.71
LINC00648-203ENST00000556923 KIFC2Q96AC6 838 aa10.63□□□□□ -0.71
LINC00648-203ENST00000556923 GPSM3Q9Y4H4 160 aa10.63□□□□□ -0.71
LINC00648-203ENST00000556923 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
LINC00648-203ENST00000556923 SLC10A4Q96EP9 437 aa10.62□□□□□ -0.71
LINC00648-203ENST00000556923 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
LINC00648-203ENST00000556923 MRPL14Q6P1L8 145 aaKnown RBP10.61□□□□□ -0.71
LINC00648-203ENST00000556923 ADAM32Q8TC27 787 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms