RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
LINC00871-204ENST00000556886 NDUFB9Q9Y6M9 179 aa12.2□□□□□ -0.46
LINC00871-204ENST00000556886 GPR37L1O60883 481 aa12.19□□□□□ -0.46
LINC00871-204ENST00000556886 POM121Q96HA1 1249 aa12.19□□□□□ -0.46
LINC00871-204ENST00000556886 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
LINC00871-204ENST00000556886 ARMC2Q8NEN0 867 aa12.18□□□□□ -0.46
LINC00871-204ENST00000556886 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
LINC00871-204ENST00000556886 V9GY48 417 aaPredicted RBP12.18□□□□□ -0.46
LINC00871-204ENST00000556886 CD2BP2O95400 341 aaKnown RBP12.17□□□□□ -0.46
LINC00871-204ENST00000556886 SPRYD7Q5W111 196 aa12.17□□□□□ -0.46
LINC00871-204ENST00000556886 SKOR1P84550 965 aa12.16□□□□□ -0.46
LINC00871-204ENST00000556886 ZNF511Q8NB15 262 aa12.16□□□□□ -0.46
LINC00871-204ENST00000556886 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
LINC00871-204ENST00000556886 SH3BP2P78314 561 aa12.15□□□□□ -0.46
LINC00871-204ENST00000556886 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
LINC00871-204ENST00000556886 PNMA1Q8ND90 353 aa12.15□□□□□ -0.46
LINC00871-204ENST00000556886 PRM3Q9NNZ6 103 aa12.14□□□□□ -0.47
LINC00871-204ENST00000556886 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
LINC00871-204ENST00000556886 ZNF697Q5TEC3 545 aa12.13□□□□□ -0.47
LINC00871-204ENST00000556886 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
LINC00871-204ENST00000556886 CLUAP1Q96AJ1 413 aa12.13□□□□□ -0.47
LINC00871-204ENST00000556886 ABL2P42684 1182 aa12.12□□□□□ -0.47
LINC00871-204ENST00000556886 WNT7BP56706 349 aa12.12□□□□□ -0.47
LINC00871-204ENST00000556886 ZNF598Q86UK7 904 aaKnown RBP12.12□□□□□ -0.47
LINC00871-204ENST00000556886 FOXJ1Q92949 421 aa12.12□□□□□ -0.47
LINC00871-204ENST00000556886 RAD21O60216 631 aa12.11□□□□□ -0.47
LINC00871-204ENST00000556886 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
LINC00871-204ENST00000556886 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
LINC00871-204ENST00000556886 IRF5Q13568 498 aa12.1□□□□□ -0.47
LINC00871-204ENST00000556886 AGERQ15109 404 aa12.09□□□□□ -0.47
LINC00871-204ENST00000556886 C4orf48Q5BLP8 95 aa12.09□□□□□ -0.47
LINC00871-204ENST00000556886 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
LINC00871-204ENST00000556886 SH3RF1Q7Z6J0 888 aa12.08□□□□□ -0.48
LINC00871-204ENST00000556886 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.48
LINC00871-204ENST00000556886 OCSTAMPQ9BR26 566 aa12.08□□□□□ -0.48
LINC00871-204ENST00000556886 ARHGAP9Q9BRR9 750 aa12.07□□□□□ -0.48
LINC00871-204ENST00000556886 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
LINC00871-204ENST00000556886 FBXO45P0C2W1 286 aa12.06□□□□□ -0.48
LINC00871-204ENST00000556886 PTK2Q05397 1052 aa12.06□□□□□ -0.48
LINC00871-204ENST00000556886 FOXC1Q12948 553 aa12.06□□□□□ -0.48
LINC00871-204ENST00000556886 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
LINC00871-204ENST00000556886 CARD14Q9BXL6 1004 aa12.06□□□□□ -0.48
LINC00871-204ENST00000556886 GPSM3Q9Y4H4 160 aa12.06□□□□□ -0.48
LINC00871-204ENST00000556886 ZBBXA8MT70 800 aa12.05□□□□□ -0.48
LINC00871-204ENST00000556886 WNT7AO00755 349 aa12.05□□□□□ -0.48
LINC00871-204ENST00000556886 C14orf37Q86TY3 774 aa12.05□□□□□ -0.48
LINC00871-204ENST00000556886 PKD2L1Q9P0L9 805 aa12.05□□□□□ -0.48
LINC00871-204ENST00000556886 A6NJR5 290 aa12.03□□□□□ -0.48
LINC00871-204ENST00000556886 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
LINC00871-204ENST00000556886 MRGPRX2Q96LB1 330 aa12.03□□□□□ -0.48
LINC00871-204ENST00000556886 GDF9O60383 454 aa12.02□□□□□ -0.49
LINC00871-204ENST00000556886 VARSP26640 1264 aaKnown RBP12.02□□□□□ -0.49
LINC00871-204ENST00000556886 ZBTB33Q86T24 672 aa12.02□□□□□ -0.49
LINC00871-204ENST00000556886 PROSER2Q86WR7 435 aaPredicted RBP12.02□□□□□ -0.49
LINC00871-204ENST00000556886 ADAM32Q8TC27 787 aa12.02□□□□□ -0.49
LINC00871-204ENST00000556886 TNFRSF10AO00220 468 aa12.01□□□□□ -0.49
LINC00871-204ENST00000556886 VAC14Q08AM6 782 aa12.01□□□□□ -0.49
LINC00871-204ENST00000556886 NR1H3Q13133 447 aa12.01□□□□□ -0.49
LINC00871-204ENST00000556886 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
LINC00871-204ENST00000556886 C1QTNF2Q9BXJ5 285 aa12.01□□□□□ -0.49
LINC00871-204ENST00000556886 ERFEQ4G0M1 354 aa12□□□□□ -0.49
LINC00871-204ENST00000556886 ZMYND15Q9H091 742 aa12□□□□□ -0.49
LINC00871-204ENST00000556886 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
LINC00871-204ENST00000556886 FAM174AQ8TBP5 190 aa11.99□□□□□ -0.49
LINC00871-204ENST00000556886 SIAH2O43255 324 aa11.98□□□□□ -0.49
LINC00871-204ENST00000556886 WASHC4Q2M389 1173 aa11.98□□□□□ -0.49
LINC00871-204ENST00000556886 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
LINC00871-204ENST00000556886 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
LINC00871-204ENST00000556886 PRR20EP86478 221 aa11.96□□□□□ -0.49
LINC00871-204ENST00000556886 PRR20CP86479 221 aa11.96□□□□□ -0.49
LINC00871-204ENST00000556886 PRR20DP86480 221 aa11.96□□□□□ -0.49
LINC00871-204ENST00000556886 PRR20BP86481 221 aa11.96□□□□□ -0.49
LINC00871-204ENST00000556886 PRR20AP86496 221 aa11.96□□□□□ -0.49
LINC00871-204ENST00000556886 TRMT44Q8IYL2 757 aaKnown RBP11.96□□□□□ -0.49
LINC00871-204ENST00000556886 SLC10A4Q96EP9 437 aa11.96□□□□□ -0.49
LINC00871-204ENST00000556886 POM121CA8CG34 1229 aa11.95□□□□□ -0.5
LINC00871-204ENST00000556886 Q6ZNB5 142 aa11.95□□□□□ -0.5
LINC00871-204ENST00000556886 PDZRN3Q9UPQ7 1066 aa11.95□□□□□ -0.5
LINC00871-204ENST00000556886 ZNF330Q9Y3S2 320 aaPredicted RBP11.95□□□□□ -0.5
LINC00871-204ENST00000556886 PCDHB9Q9Y5E1 797 aa11.95□□□□□ -0.5
LINC00871-204ENST00000556886 ARID5BQ14865 1188 aa11.94□□□□□ -0.5
LINC00871-204ENST00000556886 TRAK2O60296 914 aa11.93□□□□□ -0.5
LINC00871-204ENST00000556886 DZIP3Q86Y13 1208 aaKnown RBP11.93□□□□□ -0.5
LINC00871-204ENST00000556886 CYP4X1Q8N118 509 aa11.93□□□□□ -0.5
LINC00871-204ENST00000556886 SNIP1Q8TAD8 396 aaKnown RBP11.93□□□□□ -0.5
LINC00871-204ENST00000556886 TOR4AQ9NXH8 423 aa11.93□□□□□ -0.5
LINC00871-204ENST00000556886 CCDC180Q9P1Z9 1646 aa11.93□□□□□ -0.5
LINC00871-204ENST00000556886 EIF4G2P78344 907 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00871-204ENST00000556886 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
LINC00871-204ENST00000556886 CDK15Q96Q40 435 aa11.92□□□□□ -0.5
LINC00871-204ENST00000556886 TTC24A2A3L6 582 aaPredicted RBP11.91□□□□□ -0.5
LINC00871-204ENST00000556886 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
LINC00871-204ENST00000556886 MPNDQ8N594 471 aa11.91□□□□□ -0.5
LINC00871-204ENST00000556886 J3QL48 77 aa11.9□□□□□ -0.5
LINC00871-204ENST00000556886 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.5
LINC00871-204ENST00000556886 MAP4K5Q9Y4K4 846 aa11.9□□□□□ -0.5
LINC00871-204ENST00000556886 GRM5P41594 1212 aa11.88□□□□□ -0.51
LINC00871-204ENST00000556886 ADAMTS19Q8TE59 1207 aa11.88□□□□□ -0.51
LINC00871-204ENST00000556886 GFRA3O60609 400 aa11.87□□□□□ -0.51
LINC00871-204ENST00000556886 ADH1CP00326 375 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms