RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CRYBG1Q9Y4K1 1723 aa32.25■■■□□ 2.75
TDP1-216ENST00000556867 BRD4O60885 1362 aaPredicted RBP32.24■■■□□ 2.75
TDP1-216ENST00000556867 CABLES1Q8TDN4 633 aa32.23■■■□□ 2.75
TDP1-216ENST00000556867 AKAP12Q02952 1782 aa32.22■■■□□ 2.75
TDP1-216ENST00000556867 SLC24A1O60721 1099 aa32.22■■■□□ 2.75
TDP1-216ENST00000556867 USP6P35125 1406 aa32.22■■■□□ 2.75
TDP1-216ENST00000556867 PUS7Q96PZ0 661 aaKnown RBP32.21■■■□□ 2.75
TDP1-216ENST00000556867 HAP1P54257 671 aaPredicted RBP32.2■■■□□ 2.75
TDP1-216ENST00000556867 FNBP4Q8N3X1 1017 aaPredicted RBP32.2■■■□□ 2.75
TDP1-216ENST00000556867 CPSF1Q10570 1443 aaKnown RBP32.17■■■□□ 2.74
TDP1-216ENST00000556867 PLEKHG5O94827 1062 aa32.16■■■□□ 2.74
TDP1-216ENST00000556867 SSH2Q76I76 1423 aa32.16■■■□□ 2.74
TDP1-216ENST00000556867 PHRF1Q9P1Y6 1649 aaKnown RBP32.15■■■□□ 2.74
TDP1-216ENST00000556867 ZNF692Q9BU19 519 aaPredicted RBP32.14■■■□□ 2.74
TDP1-216ENST00000556867 USP21Q9UK80 565 aa32.14■■■□□ 2.74
TDP1-216ENST00000556867 SLIT2O94813 1529 aa32.14■■■□□ 2.74
TDP1-216ENST00000556867 MON2Q7Z3U7 1717 aa32.14■■■□□ 2.74
TDP1-216ENST00000556867 NRKQ7Z2Y5 1582 aa32.13■■■□□ 2.73
TDP1-216ENST00000556867 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.13■■■□□ 2.73
TDP1-216ENST00000556867 BCL9LQ86UU0 1499 aa32.12■■■□□ 2.73
TDP1-216ENST00000556867 SOCS7O14512 581 aa32.12■■■□□ 2.73
TDP1-216ENST00000556867 PLCH1Q4KWH8 1693 aa32.11■■■□□ 2.73
TDP1-216ENST00000556867 ABTB2Q8N961 1025 aa32.11■■■□□ 2.73
TDP1-216ENST00000556867 CD163L1Q9NR16 1453 aa32.1■■■□□ 2.73
TDP1-216ENST00000556867 NWD2Q9ULI1 1742 aa32.1■■■□□ 2.73
TDP1-216ENST00000556867 TMF1P82094 1093 aa32.09■■■□□ 2.73
TDP1-216ENST00000556867 QTRT2Q9H974 415 aaKnown RBP32.09■■■□□ 2.73
TDP1-216ENST00000556867 ATRNO75882 1429 aa32.09■■■□□ 2.73
TDP1-216ENST00000556867 PIK3C2AO00443 1686 aa32.08■■■□□ 2.73
TDP1-216ENST00000556867 NINLQ9Y2I6 1382 aa32.08■■■□□ 2.73
TDP1-216ENST00000556867 USP19O94966 1318 aa32.08■■■□□ 2.73
TDP1-216ENST00000556867 NUTM2GQ5VZR2 741 aa32.08■■■□□ 2.73
TDP1-216ENST00000556867 KTN1Q86UP2 1357 aaKnown RBP32.07■■■□□ 2.73
TDP1-216ENST00000556867 RXRBP28702 533 aa32.07■■■□□ 2.72
TDP1-216ENST00000556867 TRPC5Q9UL62 973 aaPredicted RBP32.07■■■□□ 2.72
TDP1-216ENST00000556867 COL14A1Q05707 1796 aaKnown RBP32.07■■■□□ 2.72
TDP1-216ENST00000556867 CDK12Q9NYV4 1490 aaPredicted RBP32.06■■■□□ 2.72
TDP1-216ENST00000556867 TMC1Q8TDI8 760 aa32.06■■■□□ 2.72
TDP1-216ENST00000556867 NLRP13Q86W25 1043 aa32.05■■■□□ 2.72
TDP1-216ENST00000556867 SLC12A5Q9H2X9 1139 aa32.05■■■□□ 2.72
TDP1-216ENST00000556867 TTC21BQ7Z4L5 1316 aa32.04■■■□□ 2.72
TDP1-216ENST00000556867 RBM6P78332 1123 aaKnown RBP32.04■■■□□ 2.72
TDP1-216ENST00000556867 TTC21AQ8NDW8 1320 aa32.03■■■□□ 2.72
TDP1-216ENST00000556867 FAM83GA6ND36 823 aa32.03■■■□□ 2.72
TDP1-216ENST00000556867 UNC5CLQ8IV45 518 aa32.03■■■□□ 2.72
TDP1-216ENST00000556867 HDGFL2Q7Z4V5 671 aaPredicted RBP32.01■■■□□ 2.71
TDP1-216ENST00000556867 TERF2IPQ9NYB0 399 aa32.01■■■□□ 2.71
TDP1-216ENST00000556867 SLIT3O75094 1523 aa32■■■□□ 2.71
TDP1-216ENST00000556867 NRAPQ86VF7 1730 aa32■■■□□ 2.71
TDP1-216ENST00000556867 A0A1W2PP64 1363 aa32■■■□□ 2.71
TDP1-216ENST00000556867 CDCA8Q53HL2 280 aa32■■■□□ 2.71
TDP1-216ENST00000556867 KIAA0232Q92628 1395 aa31.99■■■□□ 2.71
TDP1-216ENST00000556867 EIF4G2P78344 907 aaKnown RBP eCLIP31.99■■■□□ 2.71
TDP1-216ENST00000556867 NLRP6P59044 892 aa31.98■■■□□ 2.71
TDP1-216ENST00000556867 PRDM11Q9NQV5 511 aa31.98■■■□□ 2.71
TDP1-216ENST00000556867 EDC4Q6P2E9 1401 aaKnown RBP31.98■■■□□ 2.71
TDP1-216ENST00000556867 CPDO75976 1380 aa31.96■■■□□ 2.71
TDP1-216ENST00000556867 USP54Q70EL1 1684 aa31.95■■■□□ 2.71
TDP1-216ENST00000556867 RGS12O14924 1447 aa31.95■■■□□ 2.71
TDP1-216ENST00000556867 GCP02774 474 aa31.95■■■□□ 2.71
TDP1-216ENST00000556867 HSPA5P11021 654 aaKnown RBP31.94■■■□□ 2.7
TDP1-216ENST00000556867 ZC3H6P61129 1189 aaKnown RBP31.93■■■□□ 2.7
TDP1-216ENST00000556867 BTG4Q9NY30 223 aa31.93■■■□□ 2.7
TDP1-216ENST00000556867 ANKRD36BQ8N2N9 1353 aa31.93■■■□□ 2.7
TDP1-216ENST00000556867 MYOM1P52179 1685 aa31.92■■■□□ 2.7
TDP1-216ENST00000556867 VPS72Q15906 364 aa31.92■■■□□ 2.7
TDP1-216ENST00000556867 GJD4Q96KN9 370 aaPredicted RBP31.92■■■□□ 2.7
TDP1-216ENST00000556867 GLI3P10071 1580 aa31.92■■■□□ 2.7
TDP1-216ENST00000556867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.91■■■□□ 2.7
TDP1-216ENST00000556867 USP31Q70CQ4 1352 aa31.91■■■□□ 2.7
TDP1-216ENST00000556867 LMO7Q8WWI1 1683 aa31.89■■■□□ 2.7
TDP1-216ENST00000556867 CHRNA2Q15822 529 aa31.89■■■□□ 2.7
TDP1-216ENST00000556867 NME9Q86XW9 330 aa31.86■■■□□ 2.69
TDP1-216ENST00000556867 NFAT5O94916 1531 aa31.85■■■□□ 2.69
TDP1-216ENST00000556867 KCNH5Q8NCM2 988 aa31.84■■■□□ 2.69
TDP1-216ENST00000556867 CAMTA1Q9Y6Y1 1673 aa31.83■■■□□ 2.69
TDP1-216ENST00000556867 ZRANB1Q9UGI0 708 aa31.83■■■□□ 2.69
TDP1-216ENST00000556867 OVOS2A0A0J9YW53 1432 aa31.82■■■□□ 2.68
TDP1-216ENST00000556867 OVOS2Q6IE36 1432 aa31.82■■■□□ 2.68
TDP1-216ENST00000556867 CCDC9Q9Y3X0 531 aaKnown RBP31.81■■■□□ 2.68
TDP1-216ENST00000556867 AATKQ6ZMQ8 1374 aa31.81■■■□□ 2.68
TDP1-216ENST00000556867 COL18A1P39060 1754 aa31.8■■■□□ 2.68
TDP1-216ENST00000556867 SPATA31A5Q5VU36 1347 aa31.77■■■□□ 2.68
TDP1-216ENST00000556867 SPATA31A7Q8IWB4 1347 aa31.77■■■□□ 2.68
TDP1-216ENST00000556867 ARHGEF25Q86VW2 580 aa31.77■■■□□ 2.68
TDP1-216ENST00000556867 ABCC6O95255 1503 aa31.75■■■□□ 2.67
TDP1-216ENST00000556867 SOX12O15370 315 aa31.75■■■□□ 2.67
TDP1-216ENST00000556867 STRN4Q9NRL3 753 aa31.75■■■□□ 2.67
TDP1-216ENST00000556867 COL5A2P05997 1499 aaPredicted RBP31.75■■■□□ 2.67
TDP1-216ENST00000556867 ONECUT3O60422 494 aaPredicted RBP31.74■■■□□ 2.67
TDP1-216ENST00000556867 ZBTB7CA1YPR0 619 aa31.73■■■□□ 2.67
TDP1-216ENST00000556867 KIF20BQ96Q89 1820 aa31.72■■■□□ 2.67
TDP1-216ENST00000556867 EVA1CP58658 441 aa31.71■■■□□ 2.67
TDP1-216ENST00000556867 SPATA31A1Q5TZJ5 1347 aa31.71■■■□□ 2.67
TDP1-216ENST00000556867 LTN1O94822 1766 aa31.71■■■□□ 2.67
TDP1-216ENST00000556867 BRWD3Q6RI45 1802 aa31.7■■■□□ 2.67
TDP1-216ENST00000556867 POLR3GLQ9BT43 218 aa31.7■■■□□ 2.67
TDP1-216ENST00000556867 NSD3Q9BZ95 1437 aa31.69■■■□□ 2.66
TDP1-216ENST00000556867 COG3Q96JB2 828 aa31.69■■■□□ 2.66
TDP1-216ENST00000556867 CARD14Q9BXL6 1004 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms