RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 PPLO60437 1756 aa10.49□□□□□ -0.73
PCNX1-213ENST00000556846 SIRT1Q96EB6 747 aa10.48□□□□□ -0.73
PCNX1-213ENST00000556846 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
PCNX1-213ENST00000556846 PNPLA6Q8IY17 1366 aa10.48□□□□□ -0.73
PCNX1-213ENST00000556846 PLEKHH1Q9ULM0 1364 aa10.48□□□□□ -0.73
PCNX1-213ENST00000556846 PIK3C2GO75747 1445 aa10.48□□□□□ -0.73
PCNX1-213ENST00000556846 YTHDC2Q9H6S0 1430 aaKnown RBP10.48□□□□□ -0.73
PCNX1-213ENST00000556846 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
PCNX1-213ENST00000556846 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
PCNX1-213ENST00000556846 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
PCNX1-213ENST00000556846 PRAG1Q86YV5 1406 aa10.47□□□□□ -0.73
PCNX1-213ENST00000556846 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
PCNX1-213ENST00000556846 TRAK1Q9UPV9 953 aa10.46□□□□□ -0.73
PCNX1-213ENST00000556846 TECPR2O15040 1411 aa10.46□□□□□ -0.74
PCNX1-213ENST00000556846 SHPRHQ149N8 1683 aa10.46□□□□□ -0.74
PCNX1-213ENST00000556846 SETD1AO15047 1707 aaKnown RBP10.45□□□□□ -0.74
PCNX1-213ENST00000556846 HAP1P54257 671 aaPredicted RBP10.45□□□□□ -0.74
PCNX1-213ENST00000556846 KRT28Q7Z3Y7 464 aa10.45□□□□□ -0.74
PCNX1-213ENST00000556846 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
PCNX1-213ENST00000556846 STAC3Q96MF2 364 aa10.45□□□□□ -0.74
PCNX1-213ENST00000556846 NHSL1Q5SYE7 1610 aa10.44□□□□□ -0.74
PCNX1-213ENST00000556846 PLEKHG5O94827 1062 aa10.44□□□□□ -0.74
PCNX1-213ENST00000556846 RBM6P78332 1123 aaKnown RBP10.44□□□□□ -0.74
PCNX1-213ENST00000556846 PSME1Q06323 249 aa10.44□□□□□ -0.74
PCNX1-213ENST00000556846 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
PCNX1-213ENST00000556846 USP21Q9UK80 565 aa10.44□□□□□ -0.74
PCNX1-213ENST00000556846 MYOM2P54296 1465 aa10.43□□□□□ -0.74
PCNX1-213ENST00000556846 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
PCNX1-213ENST00000556846 HIRIP3Q9BW71 556 aaPredicted RBP10.43□□□□□ -0.74
PCNX1-213ENST00000556846 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
PCNX1-213ENST00000556846 KIF12Q96FN5 646 aa10.42□□□□□ -0.74
PCNX1-213ENST00000556846 TRPC5Q9UL62 973 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-213ENST00000556846 CDC42BPGQ6DT37 1551 aa10.42□□□□□ -0.74
PCNX1-213ENST00000556846 NRXN1Q9ULB1 1477 aa10.42□□□□□ -0.74
PCNX1-213ENST00000556846 MINK1Q8N4C8 1332 aaPredicted RBP10.41□□□□□ -0.74
PCNX1-213ENST00000556846 PMFBP1Q8TBY8 1022 aa10.41□□□□□ -0.74
PCNX1-213ENST00000556846 TSPYL2Q9H2G4 693 aaPredicted RBP10.41□□□□□ -0.74
PCNX1-213ENST00000556846 SPATA31A3Q5VYP0 1347 aa10.4□□□□□ -0.74
PCNX1-213ENST00000556846 PROM2Q8N271 834 aa10.4□□□□□ -0.74
PCNX1-213ENST00000556846 FNBP4Q8N3X1 1017 aaPredicted RBP10.4□□□□□ -0.74
PCNX1-213ENST00000556846 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.74
PCNX1-213ENST00000556846 IFT172Q9UG01 1749 aa10.4□□□□□ -0.74
PCNX1-213ENST00000556846 PXDNQ92626 1479 aa10.38□□□□□ -0.75
PCNX1-213ENST00000556846 WASLO00401 505 aaPredicted RBP10.38□□□□□ -0.75
PCNX1-213ENST00000556846 NGDNQ8NEJ9 315 aaKnown RBP10.38□□□□□ -0.75
PCNX1-213ENST00000556846 CABLES1Q8TDN4 633 aa10.38□□□□□ -0.75
PCNX1-213ENST00000556846 BMP2KQ9NSY1 1161 aaPredicted RBP10.38□□□□□ -0.75
PCNX1-213ENST00000556846 EIF3AQ14152 1382 aaKnown RBP10.37□□□□□ -0.75
PCNX1-213ENST00000556846 GPRASP1Q5JY77 1395 aa10.37□□□□□ -0.75
PCNX1-213ENST00000556846 LAMC1P11047 1609 aa10.36□□□□□ -0.75
PCNX1-213ENST00000556846 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
PCNX1-213ENST00000556846 KNDC1Q76NI1 1749 aa10.36□□□□□ -0.75
PCNX1-213ENST00000556846 DLC1Q96QB1 1528 aa10.35□□□□□ -0.75
PCNX1-213ENST00000556846 TIE1P35590 1138 aa10.35□□□□□ -0.75
PCNX1-213ENST00000556846 NEUROD1Q13562 356 aa10.35□□□□□ -0.75
PCNX1-213ENST00000556846 UNC5CLQ8IV45 518 aa10.35□□□□□ -0.75
PCNX1-213ENST00000556846 GJD4Q96KN9 370 aaPredicted RBP10.35□□□□□ -0.75
PCNX1-213ENST00000556846 TRPC6Q9Y210 931 aa10.35□□□□□ -0.75
PCNX1-213ENST00000556846 CCDC9Q9Y3X0 531 aaKnown RBP10.35□□□□□ -0.75
PCNX1-213ENST00000556846 RGS12O14924 1447 aa10.34□□□□□ -0.75
PCNX1-213ENST00000556846 ANKARQ7Z5J8 1434 aa10.34□□□□□ -0.75
PCNX1-213ENST00000556846 FMN2Q9NZ56 1722 aa10.34□□□□□ -0.75
PCNX1-213ENST00000556846 NUDT16Q96DE0 195 aaKnown RBP10.34□□□□□ -0.75
PCNX1-213ENST00000556846 CDK19Q9BWU1 502 aa10.34□□□□□ -0.75
PCNX1-213ENST00000556846 SBNO1A3KN83 1393 aa10.34□□□□□ -0.75
PCNX1-213ENST00000556846 ARHGEF10O15013 1369 aa10.34□□□□□ -0.75
PCNX1-213ENST00000556846 ADGRB1O14514 1584 aa10.34□□□□□ -0.75
PCNX1-213ENST00000556846 TNS3Q68CZ2 1445 aa10.33□□□□□ -0.76
PCNX1-213ENST00000556846 NBPF1Q3BBV0 1214 aa10.33□□□□□ -0.76
PCNX1-213ENST00000556846 KIF1AQ12756 1690 aa10.33□□□□□ -0.76
PCNX1-213ENST00000556846 PRR36Q9H6K5 1346 aa10.33□□□□□ -0.76
PCNX1-213ENST00000556846 ATAD2Q6PL18 1390 aa10.32□□□□□ -0.76
PCNX1-213ENST00000556846 L3MBTL2Q969R5 705 aa10.32□□□□□ -0.76
PCNX1-213ENST00000556846 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
PCNX1-213ENST00000556846 COL22A1Q8NFW1 1626 aaPredicted RBP10.32□□□□□ -0.76
PCNX1-213ENST00000556846 ATRNO75882 1429 aa10.32□□□□□ -0.76
PCNX1-213ENST00000556846 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
PCNX1-213ENST00000556846 A0A0G2JS52 829 aa10.31□□□□□ -0.76
PCNX1-213ENST00000556846 FAM83GA6ND36 823 aa10.31□□□□□ -0.76
PCNX1-213ENST00000556846 MAP3K13O43283 966 aa10.31□□□□□ -0.76
PCNX1-213ENST00000556846 SRPK2P78362 688 aaKnown RBP10.31□□□□□ -0.76
PCNX1-213ENST00000556846 MYT1Q01538 1121 aa10.31□□□□□ -0.76
PCNX1-213ENST00000556846 VPS72Q15906 364 aa10.29□□□□□ -0.76
PCNX1-213ENST00000556846 NUTM2GQ5VZR2 741 aa10.29□□□□□ -0.76
PCNX1-213ENST00000556846 BTG4Q9NY30 223 aa10.29□□□□□ -0.76
PCNX1-213ENST00000556846 CENPJQ9HC77 1338 aaPredicted RBP10.29□□□□□ -0.76
PCNX1-213ENST00000556846 TULP4Q9NRJ4 1543 aa10.28□□□□□ -0.76
PCNX1-213ENST00000556846 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
PCNX1-213ENST00000556846 NBPF8Q3BBV2 869 aa10.28□□□□□ -0.76
PCNX1-213ENST00000556846 SEPT12Q8IYM1 358 aa10.28□□□□□ -0.76
PCNX1-213ENST00000556846 PRDM11Q9NQV5 511 aa10.28□□□□□ -0.76
PCNX1-213ENST00000556846 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
PCNX1-213ENST00000556846 ACEP12821 1306 aa10.28□□□□□ -0.76
PCNX1-213ENST00000556846 SLIT2O94813 1529 aa10.28□□□□□ -0.76
PCNX1-213ENST00000556846 CCDC125Q86Z20 511 aa10.27□□□□□ -0.77
PCNX1-213ENST00000556846 CABP2Q9NPB3 220 aa10.27□□□□□ -0.77
PCNX1-213ENST00000556846 RGPD8O14715 1765 aaPredicted RBP10.26□□□□□ -0.77
PCNX1-213ENST00000556846 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
PCNX1-213ENST00000556846 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
PCNX1-213ENST00000556846 TTLL13PA6NNM8 815 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms