RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 WIPF1O43516 503 aa9□□□□□ -0.97
PRPF39-211ENST00000556782 SAMD9Q5K651 1589 aa8.99□□□□□ -0.97
PRPF39-211ENST00000556782 MORN1Q5T089 497 aa8.99□□□□□ -0.97
PRPF39-211ENST00000556782 EPRSP07814 1512 aaKnown RBP8.99□□□□□ -0.97
PRPF39-211ENST00000556782 KDM6BO15054 1643 aa8.98□□□□□ -0.97
PRPF39-211ENST00000556782 KIF21BO75037 1637 aa8.98□□□□□ -0.97
PRPF39-211ENST00000556782 WDR7Q9Y4E6 1490 aa8.98□□□□□ -0.97
PRPF39-211ENST00000556782 ZBTB24O43167 697 aaPredicted RBP8.98□□□□□ -0.97
PRPF39-211ENST00000556782 FMNL1O95466 1100 aaPredicted RBP8.98□□□□□ -0.97
PRPF39-211ENST00000556782 THAP11Q96EK4 314 aa8.98□□□□□ -0.97
PRPF39-211ENST00000556782 TSPOAP1O95153 1857 aa8.98□□□□□ -0.97
PRPF39-211ENST00000556782 PPRC1Q5VV67 1664 aaKnown RBP8.97□□□□□ -0.97
PRPF39-211ENST00000556782 METTL3Q86U44 580 aaKnown RBP8.97□□□□□ -0.97
PRPF39-211ENST00000556782 FAM160A2Q8N612 972 aaPredicted RBP8.97□□□□□ -0.97
PRPF39-211ENST00000556782 RDH13Q8NBN7 331 aa8.97□□□□□ -0.97
PRPF39-211ENST00000556782 MAP3K4Q9Y6R4 1608 aa8.97□□□□□ -0.97
PRPF39-211ENST00000556782 ATP6V1AP38606 617 aa8.96□□□□□ -0.98
PRPF39-211ENST00000556782 FAM9AQ8IZU1 332 aaPredicted RBP8.96□□□□□ -0.98
PRPF39-211ENST00000556782 FUT2Q10981 343 aa8.95□□□□□ -0.98
PRPF39-211ENST00000556782 DAXXQ9UER7 740 aaPredicted RBP8.95□□□□□ -0.98
PRPF39-211ENST00000556782 SEMA3EO15041 775 aa8.94□□□□□ -0.98
PRPF39-211ENST00000556782 HIC1Q14526 733 aa8.94□□□□□ -0.98
PRPF39-211ENST00000556782 SLC27A5Q9Y2P5 690 aa8.94□□□□□ -0.98
PRPF39-211ENST00000556782 SALL2Q9Y467 1007 aaPredicted RBP8.94□□□□□ -0.98
PRPF39-211ENST00000556782 TESPA1A2RU30 521 aaPredicted RBP8.93□□□□□ -0.98
PRPF39-211ENST00000556782 WNT7AO00755 349 aa8.93□□□□□ -0.98
PRPF39-211ENST00000556782 SNIP1Q8TAD8 396 aaKnown RBP8.93□□□□□ -0.98
PRPF39-211ENST00000556782 SENP2Q9HC62 589 aa8.93□□□□□ -0.98
PRPF39-211ENST00000556782 ATP13A2Q9NQ11 1180 aa8.93□□□□□ -0.98
PRPF39-211ENST00000556782 TEX14Q8IWB6 1497 aa8.93□□□□□ -0.98
PRPF39-211ENST00000556782 RAPGEF6Q8TEU7 1601 aa8.93□□□□□ -0.98
PRPF39-211ENST00000556782 EFCAB5A4FU69 1503 aa8.92□□□□□ -0.98
PRPF39-211ENST00000556782 ATP10BO94823 1461 aa8.92□□□□□ -0.98
PRPF39-211ENST00000556782 FHOD3Q2V2M9 1422 aa8.92□□□□□ -0.98
PRPF39-211ENST00000556782 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
PRPF39-211ENST00000556782 TERTO14746 1132 aaKnown RBP8.92□□□□□ -0.98
PRPF39-211ENST00000556782 SMPD1P17405 629 aa8.92□□□□□ -0.98
PRPF39-211ENST00000556782 CFAP43Q8NDM7 1665 aa8.91□□□□□ -0.98
PRPF39-211ENST00000556782 SNRPBP14678 240 aaKnown RBP8.91□□□□□ -0.98
PRPF39-211ENST00000556782 BRICD5Q6PL45 260 aa8.91□□□□□ -0.98
PRPF39-211ENST00000556782 PRDM9Q9NQV7 894 aa8.91□□□□□ -0.98
PRPF39-211ENST00000556782 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.98
PRPF39-211ENST00000556782 TRIM47Q96LD4 638 aa8.9□□□□□ -0.98
PRPF39-211ENST00000556782 MAGI3Q5TCQ9 1506 aa8.9□□□□□ -0.99
PRPF39-211ENST00000556782 NUP153P49790 1475 aaKnown RBP8.89□□□□□ -0.99
PRPF39-211ENST00000556782 COL17A1Q9UMD9 1497 aaPredicted RBP8.89□□□□□ -0.99
PRPF39-211ENST00000556782 CD109Q6YHK3 1445 aa8.89□□□□□ -0.99
PRPF39-211ENST00000556782 ARID3CA6NKF2 412 aa8.89□□□□□ -0.99
PRPF39-211ENST00000556782 FECHP22830 423 aa8.89□□□□□ -0.99
PRPF39-211ENST00000556782 GCGRP47871 477 aa8.89□□□□□ -0.99
PRPF39-211ENST00000556782 MSS51Q4VC12 460 aa8.89□□□□□ -0.99
PRPF39-211ENST00000556782 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
PRPF39-211ENST00000556782 KDM2AQ9Y2K7 1162 aa8.88□□□□□ -0.99
PRPF39-211ENST00000556782 J3QL48 77 aa8.87□□□□□ -0.99
PRPF39-211ENST00000556782 TRIM32Q13049 653 aa8.87□□□□□ -0.99
PRPF39-211ENST00000556782 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
PRPF39-211ENST00000556782 KIFC2Q96AC6 838 aa8.87□□□□□ -0.99
PRPF39-211ENST00000556782 MRGPRX2Q96LB1 330 aa8.87□□□□□ -0.99
PRPF39-211ENST00000556782 ABCA9Q8IUA7 1624 aa8.87□□□□□ -0.99
PRPF39-211ENST00000556782 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
PRPF39-211ENST00000556782 ARHGAP35Q9NRY4 1499 aa8.85□□□□□ -0.99
PRPF39-211ENST00000556782 FAM181BA6NEQ2 426 aa8.85□□□□□ -0.99
PRPF39-211ENST00000556782 GNPATO15228 680 aa8.85□□□□□ -0.99
PRPF39-211ENST00000556782 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
PRPF39-211ENST00000556782 SMYD5Q6GMV2 418 aa8.85□□□□□ -0.99
PRPF39-211ENST00000556782 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
PRPF39-211ENST00000556782 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
PRPF39-211ENST00000556782 GPR37O15354 613 aa8.84□□□□□ -0.99
PRPF39-211ENST00000556782 HAP1P54257 671 aaPredicted RBP8.84□□□□□ -0.99
PRPF39-211ENST00000556782 Q3C1V9 767 aa8.84□□□□□ -0.99
PRPF39-211ENST00000556782 SLC16A10Q8TF71 515 aa8.83□□□□□ -1
PRPF39-211ENST00000556782 HPS1Q92902 700 aa8.83□□□□□ -1
PRPF39-211ENST00000556782 FMN1Q68DA7 1419 aa8.82□□□□□ -1
PRPF39-211ENST00000556782 CDK13Q14004 1512 aaKnown RBP8.82□□□□□ -1
PRPF39-211ENST00000556782 ARAP3Q8WWN8 1544 aa8.82□□□□□ -1
PRPF39-211ENST00000556782 MMP16P51512 607 aa8.82□□□□□ -1
PRPF39-211ENST00000556782 RBM26Q5T8P6 1007 aaKnown RBP8.82□□□□□ -1
PRPF39-211ENST00000556782 VSIG10Q8N0Z9 540 aa8.82□□□□□ -1
PRPF39-211ENST00000556782 NLRP7Q8WX94 980 aa8.82□□□□□ -1
PRPF39-211ENST00000556782 HECW1Q76N89 1606 aa8.82□□□□□ -1
PRPF39-211ENST00000556782 PHLDB1Q86UU1 1377 aa8.81□□□□□ -1
PRPF39-211ENST00000556782 ADGRL1O94910 1474 aa8.81□□□□□ -1
PRPF39-211ENST00000556782 NEO1Q92859 1461 aa8.81□□□□□ -1
PRPF39-211ENST00000556782 PLEKHD1A6NEE1 506 aa8.8□□□□□ -1
PRPF39-211ENST00000556782 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.8□□□□□ -1
PRPF39-211ENST00000556782 TTC37Q6PGP7 1564 aa8.79□□□□□ -1
PRPF39-211ENST00000556782 RC3H1Q5TC82 1133 aaKnown RBP8.79□□□□□ -1
PRPF39-211ENST00000556782 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
PRPF39-211ENST00000556782 NXF1Q9UBU9 619 aaKnown RBP8.78□□□□□ -1
PRPF39-211ENST00000556782 FRMPD1Q5SYB0 1578 aa8.78□□□□□ -1
PRPF39-211ENST00000556782 CFAP74Q9C0B2 1584 aa8.78□□□□□ -1
PRPF39-211ENST00000556782 DXOO77932 396 aaKnown RBP8.77□□□□□ -1.01
PRPF39-211ENST00000556782 CCDC24Q8N4L8 307 aa8.77□□□□□ -1.01
PRPF39-211ENST00000556782 PHOX2BQ99453 314 aa8.77□□□□□ -1.01
PRPF39-211ENST00000556782 WNT7BP56706 349 aa8.76□□□□□ -1.01
PRPF39-211ENST00000556782 PCF11O94913 1555 aaKnown RBP8.76□□□□□ -1.01
PRPF39-211ENST00000556782 FANCAO15360 1455 aa8.76□□□□□ -1.01
PRPF39-211ENST00000556782 LRRIQ1Q96JM4 1722 aa8.75□□□□□ -1.01
PRPF39-211ENST00000556782 RAPGEF3O95398 923 aa8.75□□□□□ -1.01
PRPF39-211ENST00000556782 ZSCAN1Q8NBB4 408 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms