RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 NBPF8Q3BBV2 869 aa20.35■□□□□ 0.85
TRAPPC6B-206ENST00000556765 NBPF14Q5TI25 921 aa20.35■□□□□ 0.85
TRAPPC6B-206ENST00000556765 PHF8Q9UPP1 1060 aa20.35■□□□□ 0.85
TRAPPC6B-206ENST00000556765 CAMTA1Q9Y6Y1 1673 aa20.35■□□□□ 0.85
TRAPPC6B-206ENST00000556765 PLEKHH1Q9ULM0 1364 aa20.34■□□□□ 0.85
TRAPPC6B-206ENST00000556765 KCNQ2O43526 872 aa20.34■□□□□ 0.85
TRAPPC6B-206ENST00000556765 FAM196AQ6ZSG2 479 aa20.34■□□□□ 0.85
TRAPPC6B-206ENST00000556765 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.85
TRAPPC6B-206ENST00000556765 PPLO60437 1756 aa20.32■□□□□ 0.84
TRAPPC6B-206ENST00000556765 COL14A1Q05707 1796 aaKnown RBP20.32■□□□□ 0.84
TRAPPC6B-206ENST00000556765 CEP350Q5VT06 3117 aa20.32■□□□□ 0.84
TRAPPC6B-206ENST00000556765 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
TRAPPC6B-206ENST00000556765 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC6B-206ENST00000556765 C1QTNF8P60827 252 aa20.3■□□□□ 0.84
TRAPPC6B-206ENST00000556765 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
TRAPPC6B-206ENST00000556765 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
TRAPPC6B-206ENST00000556765 ABCC11Q96J66 1382 aa20.29■□□□□ 0.84
TRAPPC6B-206ENST00000556765 RGPD8O14715 1765 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC6B-206ENST00000556765 KNDC1Q76NI1 1749 aa20.27■□□□□ 0.83
TRAPPC6B-206ENST00000556765 IFT172Q9UG01 1749 aa20.26■□□□□ 0.83
TRAPPC6B-206ENST00000556765 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
TRAPPC6B-206ENST00000556765 ADGRF5Q8IZF2 1346 aa20.24■□□□□ 0.83
TRAPPC6B-206ENST00000556765 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
TRAPPC6B-206ENST00000556765 NRKQ7Z2Y5 1582 aa20.21■□□□□ 0.83
TRAPPC6B-206ENST00000556765 PMFBP1Q8TBY8 1022 aa20.2■□□□□ 0.82
TRAPPC6B-206ENST00000556765 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
TRAPPC6B-206ENST00000556765 TRPM3Q9HCF6 1732 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC6B-206ENST00000556765 PRDM11Q9NQV5 511 aa20.19■□□□□ 0.82
TRAPPC6B-206ENST00000556765 PDE3BQ13370 1112 aa20.18■□□□□ 0.82
TRAPPC6B-206ENST00000556765 ALS2Q96Q42 1657 aa20.18■□□□□ 0.82
TRAPPC6B-206ENST00000556765 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
TRAPPC6B-206ENST00000556765 STRN4Q9NRL3 753 aa20.15■□□□□ 0.82
TRAPPC6B-206ENST00000556765 CASZ1Q86V15 1759 aa20.14■□□□□ 0.81
TRAPPC6B-206ENST00000556765 CRYBG1Q9Y4K1 1723 aa20.14■□□□□ 0.81
TRAPPC6B-206ENST00000556765 MYOM1P52179 1685 aa20.14■□□□□ 0.81
TRAPPC6B-206ENST00000556765 ANKARQ7Z5J8 1434 aa20.14■□□□□ 0.81
TRAPPC6B-206ENST00000556765 GPRASP1Q5JY77 1395 aa20.14■□□□□ 0.81
TRAPPC6B-206ENST00000556765 USP35Q9P2H5 1018 aa20.14■□□□□ 0.81
TRAPPC6B-206ENST00000556765 CHD4Q14839 1912 aa20.13■□□□□ 0.81
TRAPPC6B-206ENST00000556765 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
TRAPPC6B-206ENST00000556765 ANO8Q9HCE9 1232 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC6B-206ENST00000556765 PIK3C2GO75747 1445 aa20.11■□□□□ 0.81
TRAPPC6B-206ENST00000556765 KIAA0232Q92628 1395 aa20.11■□□□□ 0.81
TRAPPC6B-206ENST00000556765 CHRNA2Q15822 529 aa20.11■□□□□ 0.81
TRAPPC6B-206ENST00000556765 ZBTB7AO95365 584 aa20.1■□□□□ 0.81
TRAPPC6B-206ENST00000556765 PTGER2P43116 358 aa20.1■□□□□ 0.81
TRAPPC6B-206ENST00000556765 SAFB2Q14151 953 aaKnown RBP eCLIP20.1■□□□□ 0.81
TRAPPC6B-206ENST00000556765 PDGFDQ9GZP0 370 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC6B-206ENST00000556765 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
TRAPPC6B-206ENST00000556765 SYT17Q9BSW7 474 aa20.09■□□□□ 0.81
TRAPPC6B-206ENST00000556765 GIGYF1O75420 1035 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC6B-206ENST00000556765 FHDC1Q9C0D6 1143 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC6B-206ENST00000556765 L3MBTL2Q969R5 705 aa20.07■□□□□ 0.8
TRAPPC6B-206ENST00000556765 PRAM1Q96QH2 718 aa20.07■□□□□ 0.8
TRAPPC6B-206ENST00000556765 RGPD3A6NKT7 1758 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC6B-206ENST00000556765 RGPD4Q7Z3J3 1758 aa20.07■□□□□ 0.8
TRAPPC6B-206ENST00000556765 SSH2Q76I76 1423 aa20.07■□□□□ 0.8
TRAPPC6B-206ENST00000556765 PAK3O75914 559 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC6B-206ENST00000556765 DIEXFQ68CQ4 756 aaKnown RBP20.06■□□□□ 0.8
TRAPPC6B-206ENST00000556765 ATF5Q9Y2D1 282 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC6B-206ENST00000556765 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
TRAPPC6B-206ENST00000556765 GOLGB1Q14789 3259 aaKnown RBP20.05■□□□□ 0.8
TRAPPC6B-206ENST00000556765 C11orf95C9JLR9 678 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC6B-206ENST00000556765 PLSCR1O15162 318 aa20.04■□□□□ 0.8
TRAPPC6B-206ENST00000556765 EVA1CP58658 441 aa20.04■□□□□ 0.8
TRAPPC6B-206ENST00000556765 TCP11L2Q8N4U5 519 aa20.04■□□□□ 0.8
TRAPPC6B-206ENST00000556765 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
TRAPPC6B-206ENST00000556765 LARP1Q6PKG0 1096 aaKnown RBP20.02■□□□□ 0.8
TRAPPC6B-206ENST00000556765 BCL11BQ9C0K0 894 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC6B-206ENST00000556765 PHRF1Q9P1Y6 1649 aaKnown RBP20.02■□□□□ 0.79
TRAPPC6B-206ENST00000556765 DLC1Q96QB1 1528 aa20.02■□□□□ 0.79
TRAPPC6B-206ENST00000556765 NGDNQ8NEJ9 315 aaKnown RBP20.01■□□□□ 0.79
TRAPPC6B-206ENST00000556765 STAC3Q96MF2 364 aa20.01■□□□□ 0.79
TRAPPC6B-206ENST00000556765 C14orf93Q9H972 538 aaKnown RBP20.01■□□□□ 0.79
TRAPPC6B-206ENST00000556765 POGKQ9P215 609 aa20.01■□□□□ 0.79
TRAPPC6B-206ENST00000556765 OVOS2A0A0G2JMS6 1433 aa20.01■□□□□ 0.79
TRAPPC6B-206ENST00000556765 OVOS2A0A0J9YW53 1432 aa20.01■□□□□ 0.79
TRAPPC6B-206ENST00000556765 OVOS2Q6IE36 1432 aa20.01■□□□□ 0.79
TRAPPC6B-206ENST00000556765 PRR36Q9H6K5 1346 aa20.01■□□□□ 0.79
TRAPPC6B-206ENST00000556765 PARP4Q9UKK3 1724 aaKnown RBP19.99■□□□□ 0.79
TRAPPC6B-206ENST00000556765 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
TRAPPC6B-206ENST00000556765 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
TRAPPC6B-206ENST00000556765 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC6B-206ENST00000556765 PEAK1Q9H792 1746 aa19.98■□□□□ 0.79
TRAPPC6B-206ENST00000556765 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
TRAPPC6B-206ENST00000556765 CFAP70Q5T0N1 1121 aa19.96■□□□□ 0.79
TRAPPC6B-206ENST00000556765 PROM2Q8N271 834 aa19.96■□□□□ 0.79
TRAPPC6B-206ENST00000556765 SGIP1Q9BQI5 828 aa19.96■□□□□ 0.79
TRAPPC6B-206ENST00000556765 MTFR1LQ9H019 292 aa19.96■□□□□ 0.79
TRAPPC6B-206ENST00000556765 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
TRAPPC6B-206ENST00000556765 SBF2Q86WG5 1849 aa19.95■□□□□ 0.78
TRAPPC6B-206ENST00000556765 ATP7BP35670 1465 aa19.94■□□□□ 0.78
TRAPPC6B-206ENST00000556765 NUTM2GQ5VZR2 741 aa19.94■□□□□ 0.78
TRAPPC6B-206ENST00000556765 PTF1AQ7RTS3 328 aa19.94■□□□□ 0.78
TRAPPC6B-206ENST00000556765 GPR162Q16538 588 aa19.93■□□□□ 0.78
TRAPPC6B-206ENST00000556765 ARXQ96QS3 562 aa19.93■□□□□ 0.78
TRAPPC6B-206ENST00000556765 LMO7Q8WWI1 1683 aa19.93■□□□□ 0.78
TRAPPC6B-206ENST00000556765 MAP3K5Q99683 1374 aa19.93■□□□□ 0.78
TRAPPC6B-206ENST00000556765 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRAPPC6B-206ENST00000556765 SLC15A2Q16348 729 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms