RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 FAM83GA6ND36 823 aa15.35■□□□□ 0.05
XRCC3-216ENST00000556682 CCDC9Q9Y3X0 531 aaKnown RBP15.35■□□□□ 0.05
XRCC3-216ENST00000556682 VPS72Q15906 364 aa15.34■□□□□ 0.05
XRCC3-216ENST00000556682 ABTB2Q8N961 1025 aa15.34■□□□□ 0.05
XRCC3-216ENST00000556682 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
XRCC3-216ENST00000556682 ITSN1Q15811 1721 aa15.34■□□□□ 0.05
XRCC3-216ENST00000556682 PPIP5K1Q6PFW1 1433 aa15.34■□□□□ 0.05
XRCC3-216ENST00000556682 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
XRCC3-216ENST00000556682 CABP1Q9NZU7 370 aa15.33■□□□□ 0.04
XRCC3-216ENST00000556682 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
XRCC3-216ENST00000556682 MARF1Q9Y4F3 1742 aaKnown RBP15.32■□□□□ 0.04
XRCC3-216ENST00000556682 BTG4Q9NY30 223 aa15.32■□□□□ 0.04
XRCC3-216ENST00000556682 BRD4O60885 1362 aaPredicted RBP15.32■□□□□ 0.04
XRCC3-216ENST00000556682 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
XRCC3-216ENST00000556682 TRPM3Q9HCF6 1732 aaPredicted RBP15.31■□□□□ 0.04
XRCC3-216ENST00000556682 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
XRCC3-216ENST00000556682 NLRP13Q86W25 1043 aa15.31■□□□□ 0.04
XRCC3-216ENST00000556682 RALGAPBQ86X10 1494 aa15.3■□□□□ 0.04
XRCC3-216ENST00000556682 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
XRCC3-216ENST00000556682 ALS2Q96Q42 1657 aa15.29■□□□□ 0.04
XRCC3-216ENST00000556682 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.28■□□□□ 0.04
XRCC3-216ENST00000556682 QRICH2Q9H0J4 1663 aa15.28■□□□□ 0.04
XRCC3-216ENST00000556682 ONECUT3O60422 494 aaPredicted RBP15.27■□□□□ 0.04
XRCC3-216ENST00000556682 SLC24A1O60721 1099 aa15.27■□□□□ 0.04
XRCC3-216ENST00000556682 ZC3H6P61129 1189 aaKnown RBP15.27■□□□□ 0.04
XRCC3-216ENST00000556682 CCDC125Q86Z20 511 aa15.27■□□□□ 0.04
XRCC3-216ENST00000556682 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.04
XRCC3-216ENST00000556682 KIAA0232Q92628 1395 aa15.26■□□□□ 0.03
XRCC3-216ENST00000556682 SBNO2Q9Y2G9 1366 aa15.26■□□□□ 0.03
XRCC3-216ENST00000556682 TOPAZ1Q8N9V7 1692 aa15.26■□□□□ 0.03
XRCC3-216ENST00000556682 A0A0G2JS52 829 aa15.26■□□□□ 0.03
XRCC3-216ENST00000556682 MYT1Q01538 1121 aa15.26■□□□□ 0.03
XRCC3-216ENST00000556682 EVA1CP58658 441 aa15.25■□□□□ 0.03
XRCC3-216ENST00000556682 NLRP6P59044 892 aa15.25■□□□□ 0.03
XRCC3-216ENST00000556682 NWD2Q9ULI1 1742 aa15.25■□□□□ 0.03
XRCC3-216ENST00000556682 USP6P35125 1406 aa15.25■□□□□ 0.03
XRCC3-216ENST00000556682 ABCA3Q99758 1704 aa15.24■□□□□ 0.03
XRCC3-216ENST00000556682 GCP02774 474 aa15.24■□□□□ 0.03
XRCC3-216ENST00000556682 CHRNA2Q15822 529 aa15.24■□□□□ 0.03
XRCC3-216ENST00000556682 PCGF6Q9BYE7 350 aa15.24■□□□□ 0.03
XRCC3-216ENST00000556682 COL14A1Q05707 1796 aaKnown RBP15.24■□□□□ 0.03
XRCC3-216ENST00000556682 USP19O94966 1318 aa15.23■□□□□ 0.03
XRCC3-216ENST00000556682 CLSPNQ9HAW4 1339 aa15.23■□□□□ 0.03
XRCC3-216ENST00000556682 FAM98CQ17RN3 349 aaKnown RBP15.23■□□□□ 0.03
XRCC3-216ENST00000556682 KRT27Q7Z3Y8 459 aa15.23■□□□□ 0.03
XRCC3-216ENST00000556682 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
XRCC3-216ENST00000556682 TIMELESSQ9UNS1 1208 aa15.23■□□□□ 0.03
XRCC3-216ENST00000556682 GLI3P10071 1580 aa15.23■□□□□ 0.03
XRCC3-216ENST00000556682 SPATA31A5Q5VU36 1347 aa15.22■□□□□ 0.03
XRCC3-216ENST00000556682 SPATA31A7Q8IWB4 1347 aa15.22■□□□□ 0.03
XRCC3-216ENST00000556682 PUS7Q96PZ0 661 aaKnown RBP15.22■□□□□ 0.03
XRCC3-216ENST00000556682 CPDO75976 1380 aa15.22■□□□□ 0.03
XRCC3-216ENST00000556682 PLCH1Q4KWH8 1693 aa15.22■□□□□ 0.03
XRCC3-216ENST00000556682 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
XRCC3-216ENST00000556682 TMC1Q8TDI8 760 aa15.21■□□□□ 0.03
XRCC3-216ENST00000556682 TTC21BQ7Z4L5 1316 aa15.2■□□□□ 0.02
XRCC3-216ENST00000556682 SF3B2Q13435 895 aaKnown RBP15.2■□□□□ 0.02
XRCC3-216ENST00000556682 HDGFL2Q7Z4V5 671 aaPredicted RBP15.2■□□□□ 0.02
XRCC3-216ENST00000556682 ST20-MTHFSA0A0A6YYL1 179 aa15.19■□□□□ 0.02
XRCC3-216ENST00000556682 KCNH5Q8NCM2 988 aa15.19■□□□□ 0.02
XRCC3-216ENST00000556682 TERF2IPQ9NYB0 399 aa15.19■□□□□ 0.02
XRCC3-216ENST00000556682 KTN1Q86UP2 1357 aaKnown RBP15.19■□□□□ 0.02
XRCC3-216ENST00000556682 SPATA31A1Q5TZJ5 1347 aa15.18■□□□□ 0.02
XRCC3-216ENST00000556682 SSH2Q76I76 1423 aa15.18■□□□□ 0.02
XRCC3-216ENST00000556682 ZBTB7CA1YPR0 619 aa15.18■□□□□ 0.02
XRCC3-216ENST00000556682 CPSF1Q10570 1443 aaKnown RBP15.17■□□□□ 0.02
XRCC3-216ENST00000556682 CRYBG1Q9Y4K1 1723 aa15.17■□□□□ 0.02
XRCC3-216ENST00000556682 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
XRCC3-216ENST00000556682 SLC12A5Q9H2X9 1139 aa15.16■□□□□ 0.02
XRCC3-216ENST00000556682 PHRF1Q9P1Y6 1649 aaKnown RBP15.16■□□□□ 0.02
XRCC3-216ENST00000556682 BLMP54132 1417 aaPredicted RBP15.16■□□□□ 0.02
XRCC3-216ENST00000556682 NRAPQ86VF7 1730 aa15.15■□□□□ 0.02
XRCC3-216ENST00000556682 AATKQ6ZMQ8 1374 aa15.15■□□□□ 0.02
XRCC3-216ENST00000556682 LARP1Q6PKG0 1096 aaKnown RBP15.15■□□□□ 0.02
XRCC3-216ENST00000556682 BARGINQ6ZT62 677 aa15.15■□□□□ 0.02
XRCC3-216ENST00000556682 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
XRCC3-216ENST00000556682 TCP11L2Q8N4U5 519 aa15.15■□□□□ 0.02
XRCC3-216ENST00000556682 TESK2Q96S53 571 aa15.15■□□□□ 0.02
XRCC3-216ENST00000556682 THRAP3Q9Y2W1 955 aaKnown RBP15.15■□□□□ 0.02
XRCC3-216ENST00000556682 NRKQ7Z2Y5 1582 aa15.15■□□□□ 0.02
XRCC3-216ENST00000556682 TMF1P82094 1093 aa15.14■□□□□ 0.01
XRCC3-216ENST00000556682 NINLQ9Y2I6 1382 aa15.13■□□□□ 0.01
XRCC3-216ENST00000556682 CDCA8Q53HL2 280 aa15.13■□□□□ 0.01
XRCC3-216ENST00000556682 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
XRCC3-216ENST00000556682 SOX12O15370 315 aa15.12■□□□□ 0.01
XRCC3-216ENST00000556682 PDE3BQ13370 1112 aa15.12■□□□□ 0.01
XRCC3-216ENST00000556682 ARHGEF25Q86VW2 580 aa15.12■□□□□ 0.01
XRCC3-216ENST00000556682 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
XRCC3-216ENST00000556682 CAMTA1Q9Y6Y1 1673 aa15.12■□□□□ 0.01
XRCC3-216ENST00000556682 SLIT3O75094 1523 aa15.12■□□□□ 0.01
XRCC3-216ENST00000556682 USP47Q96K76 1375 aa15.11■□□□□ 0.01
XRCC3-216ENST00000556682 BAG6P46379 1132 aa15.11■□□□□ 0.01
XRCC3-216ENST00000556682 FAM196AQ6ZSG2 479 aa15.11■□□□□ 0.01
XRCC3-216ENST00000556682 TOM1L2Q6ZVM7 507 aa15.11■□□□□ 0.01
XRCC3-216ENST00000556682 USP31Q70CQ4 1352 aa15.11■□□□□ 0.01
XRCC3-216ENST00000556682 NME9Q86XW9 330 aa15.1■□□□□ 0.01
XRCC3-216ENST00000556682 EDC4Q6P2E9 1401 aaKnown RBP15.09■□□□□ 0.01
XRCC3-216ENST00000556682 COL5A2P05997 1499 aaPredicted RBP15.09■□□□□ 0.01
XRCC3-216ENST00000556682 CSB-PGBD3P0DP91 1061 aa15.09■□□□□ 0.01
XRCC3-216ENST00000556682 A0A1W2PP64 1363 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms