RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 QPCTQ16769 361 aa8.99□□□□□ -0.97
ATXN3-243ENST00000556671 BAP1Q92560 729 aa8.99□□□□□ -0.97
ATXN3-243ENST00000556671 CLK2P49760 499 aaKnown RBP8.98□□□□□ -0.97
ATXN3-243ENST00000556671 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
ATXN3-243ENST00000556671 ZNF511Q8NB15 262 aa8.98□□□□□ -0.97
ATXN3-243ENST00000556671 ZNF775Q96BV0 537 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-243ENST00000556671 RSPH6AQ9H0K4 717 aa8.98□□□□□ -0.97
ATXN3-243ENST00000556671 CTHP32929 405 aa8.97□□□□□ -0.97
ATXN3-243ENST00000556671 HPS1Q92902 700 aa8.97□□□□□ -0.97
ATXN3-243ENST00000556671 NUTM2BA6NNL0 878 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-243ENST00000556671 NUTM2EB1AL46 878 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-243ENST00000556671 PER1O15534 1290 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-243ENST00000556671 ALDH1A1P00352 501 aa8.96□□□□□ -0.98
ATXN3-243ENST00000556671 NUTM2DQ5VT03 806 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-243ENST00000556671 NUTM2AQ8IVF1 878 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-243ENST00000556671 MAP10Q9P2G4 905 aa8.96□□□□□ -0.98
ATXN3-243ENST00000556671 KDM4CQ9H3R0 1056 aa8.95□□□□□ -0.98
ATXN3-243ENST00000556671 GMPR2Q9P2T1 348 aaKnown RBP8.95□□□□□ -0.98
ATXN3-243ENST00000556671 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
ATXN3-243ENST00000556671 SCRIBQ14160 1630 aa8.94□□□□□ -0.98
ATXN3-243ENST00000556671 RTL5Q5HYW3 569 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-243ENST00000556671 GPBP1L1Q9HC44 474 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-243ENST00000556671 POLR3EQ9NVU0 708 aa8.94□□□□□ -0.98
ATXN3-243ENST00000556671 DCAF1Q9Y4B6 1507 aa8.94□□□□□ -0.98
ATXN3-243ENST00000556671 VARSP26640 1264 aaKnown RBP8.93□□□□□ -0.98
ATXN3-243ENST00000556671 TSC1Q92574 1164 aa8.93□□□□□ -0.98
ATXN3-243ENST00000556671 MPNDQ8N594 471 aa8.92□□□□□ -0.98
ATXN3-243ENST00000556671 HELBQ8NG08 1087 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-243ENST00000556671 ATP13A2Q9NQ11 1180 aa8.92□□□□□ -0.98
ATXN3-243ENST00000556671 TLL2Q9Y6L7 1015 aa8.92□□□□□ -0.98
ATXN3-243ENST00000556671 WASF2Q9Y6W5 498 aa8.92□□□□□ -0.98
ATXN3-243ENST00000556671 SH3D19Q5HYK7 790 aa8.91□□□□□ -0.98
ATXN3-243ENST00000556671 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
ATXN3-243ENST00000556671 FAM117AQ9C073 453 aa8.91□□□□□ -0.98
ATXN3-243ENST00000556671 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
ATXN3-243ENST00000556671 PLEKHG3A1L390 1219 aa8.89□□□□□ -0.99
ATXN3-243ENST00000556671 C11orf95C9JLR9 678 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-243ENST00000556671 FOXJ1Q92949 421 aa8.89□□□□□ -0.99
ATXN3-243ENST00000556671 FAM174AQ8TBP5 190 aa8.88□□□□□ -0.99
ATXN3-243ENST00000556671 ARMC2Q8NEN0 867 aa8.87□□□□□ -0.99
ATXN3-243ENST00000556671 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.87□□□□□ -0.99
ATXN3-243ENST00000556671 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
ATXN3-243ENST00000556671 FBXO31Q5XUX0 539 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-243ENST00000556671 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-243ENST00000556671 TRIM47Q96LD4 638 aa8.86□□□□□ -0.99
ATXN3-243ENST00000556671 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
ATXN3-243ENST00000556671 CAPN5O15484 640 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-243ENST00000556671 CTDSPL2Q05D32 466 aa8.85□□□□□ -0.99
ATXN3-243ENST00000556671 NNTQ13423 1086 aa8.85□□□□□ -0.99
ATXN3-243ENST00000556671 PPP2R2DQ66LE6 453 aa8.85□□□□□ -0.99
ATXN3-243ENST00000556671 BPHLQ86WA6 291 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-243ENST00000556671 CDK15Q96Q40 435 aa8.85□□□□□ -0.99
ATXN3-243ENST00000556671 BICRAQ9NZM4 1560 aa8.85□□□□□ -0.99
ATXN3-243ENST00000556671 NBPF14Q5TI25 921 aa8.84□□□□□ -0.99
ATXN3-243ENST00000556671 SH3RF1Q7Z6J0 888 aa8.84□□□□□ -0.99
ATXN3-243ENST00000556671 ADH1CP00326 375 aa8.83□□□□□ -1
ATXN3-243ENST00000556671 SNRPBP14678 240 aaKnown RBP8.83□□□□□ -1
ATXN3-243ENST00000556671 AGERQ15109 404 aa8.83□□□□□ -1
ATXN3-243ENST00000556671 KIFC2Q96AC6 838 aa8.83□□□□□ -1
ATXN3-243ENST00000556671 LCE2AQ5TA79 106 aaPredicted RBP8.82□□□□□ -1
ATXN3-243ENST00000556671 TREML4Q6UXN2 200 aa8.82□□□□□ -1
ATXN3-243ENST00000556671 SH3BP5LQ7L8J4 393 aa8.82□□□□□ -1
ATXN3-243ENST00000556671 TRIM46Q7Z4K8 759 aa8.82□□□□□ -1
ATXN3-243ENST00000556671 GPKOWQ92917 476 aaPredicted RBP eCLIP8.82□□□□□ -1
ATXN3-243ENST00000556671 C1QTNF2Q9BXJ5 285 aa8.82□□□□□ -1
ATXN3-243ENST00000556671 BMP1P13497 986 aa8.81□□□□□ -1
ATXN3-243ENST00000556671 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
ATXN3-243ENST00000556671 TIMP2P16035 220 aa8.8□□□□□ -1
ATXN3-243ENST00000556671 ARID5BQ14865 1188 aa8.8□□□□□ -1
ATXN3-243ENST00000556671 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
ATXN3-243ENST00000556671 SHROOM4Q9ULL8 1493 aa8.8□□□□□ -1
ATXN3-243ENST00000556671 NR5A1Q13285 461 aa8.79□□□□□ -1
ATXN3-243ENST00000556671 ATP1B4Q9UN42 357 aaPredicted RBP8.79□□□□□ -1
ATXN3-243ENST00000556671 GRM5P41594 1212 aa8.78□□□□□ -1
ATXN3-243ENST00000556671 WDR4P57081 412 aaKnown RBP8.78□□□□□ -1
ATXN3-243ENST00000556671 TRMT44Q8IYL2 757 aaKnown RBP8.78□□□□□ -1
ATXN3-243ENST00000556671 MAP4K5Q9Y4K4 846 aa8.78□□□□□ -1
ATXN3-243ENST00000556671 NR3C2P08235 984 aa8.77□□□□□ -1.01
ATXN3-243ENST00000556671 NFX1Q12986 1120 aaKnown RBP8.77□□□□□ -1.01
ATXN3-243ENST00000556671 PDXDC2PQ6P474 469 aa8.77□□□□□ -1.01
ATXN3-243ENST00000556671 GOPCQ9HD26 462 aa8.77□□□□□ -1.01
ATXN3-243ENST00000556671 FKBPLQ9UIM3 349 aa8.77□□□□□ -1.01
ATXN3-243ENST00000556671 MAGEB6P1A0A0J9YX57 407 aa8.76□□□□□ -1.01
ATXN3-243ENST00000556671 AP1G2O75843 785 aa8.76□□□□□ -1.01
ATXN3-243ENST00000556671 WFS1O76024 890 aa8.76□□□□□ -1.01
ATXN3-243ENST00000556671 NR6A1Q15406 480 aa8.76□□□□□ -1.01
ATXN3-243ENST00000556671 NEUROD2Q15784 382 aa8.76□□□□□ -1.01
ATXN3-243ENST00000556671 ERFEQ4G0M1 354 aa8.75□□□□□ -1.01
ATXN3-243ENST00000556671 MRPL14Q6P1L8 145 aaKnown RBP8.75□□□□□ -1.01
ATXN3-243ENST00000556671 ZFP42Q96MM3 310 aa8.75□□□□□ -1.01
ATXN3-243ENST00000556671 ZC3H4Q9UPT8 1303 aaKnown RBP8.75□□□□□ -1.01
ATXN3-243ENST00000556671 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-243ENST00000556671 RFC5P40937 340 aa8.74□□□□□ -1.01
ATXN3-243ENST00000556671 VASH1Q7L8A9 365 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-243ENST00000556671 ITPKCQ96DU7 683 aa8.74□□□□□ -1.01
ATXN3-243ENST00000556671 CARD14Q9BXL6 1004 aa8.74□□□□□ -1.01
ATXN3-243ENST00000556671 TERTO14746 1132 aaKnown RBP8.73□□□□□ -1.01
ATXN3-243ENST00000556671 USP17L8P0C7I0 530 aa8.73□□□□□ -1.01
ATXN3-243ENST00000556671 FSHRP23945 695 aa8.73□□□□□ -1.01
ATXN3-243ENST00000556671 ARHGAP9Q9BRR9 750 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms