RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
SRSF5-215ENST00000556587 USP32Q8NFA0 1604 aa17.13■□□□□ 0.33
SRSF5-215ENST00000556587 SPATA31A3Q5VYP0 1347 aa17.12■□□□□ 0.33
SRSF5-215ENST00000556587 ADGRB2O60241 1585 aa17.12■□□□□ 0.33
SRSF5-215ENST00000556587 TMF1P82094 1093 aa17.12■□□□□ 0.33
SRSF5-215ENST00000556587 ABCA3Q99758 1704 aa17.11■□□□□ 0.33
SRSF5-215ENST00000556587 SLIT2O94813 1529 aa17.1■□□□□ 0.33
SRSF5-215ENST00000556587 ATAD2Q6PL18 1390 aa17.1■□□□□ 0.33
SRSF5-215ENST00000556587 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
SRSF5-215ENST00000556587 MYT1Q01538 1121 aa17.09■□□□□ 0.33
SRSF5-215ENST00000556587 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
SRSF5-215ENST00000556587 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
SRSF5-215ENST00000556587 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
SRSF5-215ENST00000556587 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.33
SRSF5-215ENST00000556587 NBPF1Q3BBV0 1214 aa17.08■□□□□ 0.33
SRSF5-215ENST00000556587 GLI3P10071 1580 aa17.08■□□□□ 0.32
SRSF5-215ENST00000556587 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.32
SRSF5-215ENST00000556587 KRT28Q7Z3Y7 464 aa17.07■□□□□ 0.32
SRSF5-215ENST00000556587 PHF8Q9UPP1 1060 aa17.07■□□□□ 0.32
SRSF5-215ENST00000556587 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
SRSF5-215ENST00000556587 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
SRSF5-215ENST00000556587 TRPM3Q9HCF6 1732 aaPredicted RBP17.06■□□□□ 0.32
SRSF5-215ENST00000556587 SAFB2Q14151 953 aaKnown RBP eCLIP17.05■□□□□ 0.32
SRSF5-215ENST00000556587 GJD4Q96KN9 370 aaPredicted RBP17.05■□□□□ 0.32
SRSF5-215ENST00000556587 TESK2Q96S53 571 aa17.05■□□□□ 0.32
SRSF5-215ENST00000556587 PPP4R2Q9NY27 417 aa17.05■□□□□ 0.32
SRSF5-215ENST00000556587 ANKARQ7Z5J8 1434 aa17.05■□□□□ 0.32
SRSF5-215ENST00000556587 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
SRSF5-215ENST00000556587 INSRP06213 1382 aa17.05■□□□□ 0.32
SRSF5-215ENST00000556587 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
SRSF5-215ENST00000556587 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
SRSF5-215ENST00000556587 NWD2Q9ULI1 1742 aa17.05■□□□□ 0.32
SRSF5-215ENST00000556587 UNC5CLQ8IV45 518 aa17.03■□□□□ 0.32
SRSF5-215ENST00000556587 KIAA1210Q9ULL0 1709 aa17.03■□□□□ 0.32
SRSF5-215ENST00000556587 BRWD3Q6RI45 1802 aa17.03■□□□□ 0.32
SRSF5-215ENST00000556587 NUDCQ9Y266 331 aa17.03■□□□□ 0.32
SRSF5-215ENST00000556587 ALS2Q96Q42 1657 aa17.02■□□□□ 0.32
SRSF5-215ENST00000556587 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.31
SRSF5-215ENST00000556587 PER1O15534 1290 aaPredicted RBP17.01■□□□□ 0.31
SRSF5-215ENST00000556587 PSME1Q06323 249 aa17.01■□□□□ 0.31
SRSF5-215ENST00000556587 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
SRSF5-215ENST00000556587 POGKQ9P215 609 aa17.01■□□□□ 0.31
SRSF5-215ENST00000556587 ARHGEF10O15013 1369 aa17.01■□□□□ 0.31
SRSF5-215ENST00000556587 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
SRSF5-215ENST00000556587 TRAK1Q9UPV9 953 aa17■□□□□ 0.31
SRSF5-215ENST00000556587 PRR36Q9H6K5 1346 aa16.99■□□□□ 0.31
SRSF5-215ENST00000556587 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
SRSF5-215ENST00000556587 NRAPQ86VF7 1730 aa16.99■□□□□ 0.31
SRSF5-215ENST00000556587 PMFBP1Q8TBY8 1022 aa16.98■□□□□ 0.31
SRSF5-215ENST00000556587 PDE3BQ13370 1112 aa16.97■□□□□ 0.31
SRSF5-215ENST00000556587 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
SRSF5-215ENST00000556587 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.31
SRSF5-215ENST00000556587 PANK3Q9H999 370 aa16.96■□□□□ 0.31
SRSF5-215ENST00000556587 ITSN1Q15811 1721 aa16.96■□□□□ 0.31
SRSF5-215ENST00000556587 VPS72Q15906 364 aa16.95■□□□□ 0.3
SRSF5-215ENST00000556587 CCDC125Q86Z20 511 aa16.95■□□□□ 0.3
SRSF5-215ENST00000556587 ATP7BP35670 1465 aa16.95■□□□□ 0.3
SRSF5-215ENST00000556587 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
SRSF5-215ENST00000556587 HAP1P54257 671 aaPredicted RBP16.95■□□□□ 0.3
SRSF5-215ENST00000556587 RNF123Q5XPI4 1314 aa16.94■□□□□ 0.3
SRSF5-215ENST00000556587 FAM83GA6ND36 823 aa16.94■□□□□ 0.3
SRSF5-215ENST00000556587 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
SRSF5-215ENST00000556587 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
SRSF5-215ENST00000556587 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
SRSF5-215ENST00000556587 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
SRSF5-215ENST00000556587 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
SRSF5-215ENST00000556587 TOPAZ1Q8N9V7 1692 aa16.92■□□□□ 0.3
SRSF5-215ENST00000556587 BLMP54132 1417 aaPredicted RBP16.92■□□□□ 0.3
SRSF5-215ENST00000556587 SEPT12Q8IYM1 358 aa16.91■□□□□ 0.3
SRSF5-215ENST00000556587 NPC1L1Q9UHC9 1359 aa16.9■□□□□ 0.3
SRSF5-215ENST00000556587 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
SRSF5-215ENST00000556587 PHRF1Q9P1Y6 1649 aaKnown RBP16.89■□□□□ 0.29
SRSF5-215ENST00000556587 CC2D1BQ5T0F9 858 aaKnown RBP16.87■□□□□ 0.29
SRSF5-215ENST00000556587 BTG4Q9NY30 223 aa16.87■□□□□ 0.29
SRSF5-215ENST00000556587 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
SRSF5-215ENST00000556587 SBNO2Q9Y2G9 1366 aa16.87■□□□□ 0.29
SRSF5-215ENST00000556587 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
SRSF5-215ENST00000556587 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
SRSF5-215ENST00000556587 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
SRSF5-215ENST00000556587 CCDC9Q9Y3X0 531 aaKnown RBP16.86■□□□□ 0.29
SRSF5-215ENST00000556587 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
SRSF5-215ENST00000556587 RBM19Q9Y4C8 960 aaKnown RBP16.85■□□□□ 0.29
SRSF5-215ENST00000556587 POLR3AO14802 1390 aaPredicted RBP16.85■□□□□ 0.29
SRSF5-215ENST00000556587 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
SRSF5-215ENST00000556587 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
SRSF5-215ENST00000556587 FAM98CQ17RN3 349 aaKnown RBP16.82■□□□□ 0.28
SRSF5-215ENST00000556587 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
SRSF5-215ENST00000556587 SPATA31A5Q5VU36 1347 aa16.82■□□□□ 0.28
SRSF5-215ENST00000556587 SPATA31A7Q8IWB4 1347 aa16.82■□□□□ 0.28
SRSF5-215ENST00000556587 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
SRSF5-215ENST00000556587 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
SRSF5-215ENST00000556587 AMER1Q5JTC6 1135 aaPredicted RBP16.81■□□□□ 0.28
SRSF5-215ENST00000556587 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
SRSF5-215ENST00000556587 RGPD1P0DJD0 1748 aa16.8■□□□□ 0.28
SRSF5-215ENST00000556587 ACEP12821 1306 aa16.8■□□□□ 0.28
SRSF5-215ENST00000556587 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.281e-10■□□□□ 10.3
SRSF5-215ENST00000556587 CCDC61Q9Y6R9 512 aa16.8■□□□□ 0.28
SRSF5-215ENST00000556587 TNS1Q9HBL0 1735 aaKnown RBP16.79■□□□□ 0.28
SRSF5-215ENST00000556587 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
SRSF5-215ENST00000556587 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms