RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 SH3BP2P78314 561 aa6.6□□□□□ -1.35
TGFB3-205ENST00000556507 NEUROD2Q15784 382 aa6.6□□□□□ -1.35
TGFB3-205ENST00000556507 LINC01559Q495D7 138 aa6.6□□□□□ -1.35
TGFB3-205ENST00000556507 SH3D19Q5HYK7 790 aa6.6□□□□□ -1.35
TGFB3-205ENST00000556507 RTL5Q5HYW3 569 aaPredicted RBP6.6□□□□□ -1.35
TGFB3-205ENST00000556507 HELBQ8NG08 1087 aaPredicted RBP6.6□□□□□ -1.35
TGFB3-205ENST00000556507 BAP1Q92560 729 aa6.6□□□□□ -1.35
TGFB3-205ENST00000556507 PLEKHG3A1L390 1219 aa6.59□□□□□ -1.35
TGFB3-205ENST00000556507 PER1O15534 1290 aaPredicted RBP6.59□□□□□ -1.35
TGFB3-205ENST00000556507 TPRNQ4KMQ1 711 aa6.59□□□□□ -1.35
TGFB3-205ENST00000556507 EHBP1Q8NDI1 1231 aa6.59□□□□□ -1.35
TGFB3-205ENST00000556507 J3QL48 77 aa6.58□□□□□ -1.36
TGFB3-205ENST00000556507 F12P00748 615 aaPredicted RBP6.58□□□□□ -1.36
TGFB3-205ENST00000556507 SMPD1P17405 629 aa6.58□□□□□ -1.36
TGFB3-205ENST00000556507 PROCA1Q8NCQ7 364 aaPredicted RBP6.58□□□□□ -1.36
TGFB3-205ENST00000556507 MAP10Q9P2G4 905 aa6.58□□□□□ -1.36
TGFB3-205ENST00000556507 ST8SIA5O15466 376 aa6.57□□□□□ -1.36
TGFB3-205ENST00000556507 AVPP01185 164 aa6.57□□□□□ -1.36
TGFB3-205ENST00000556507 ZNF787Q6DD87 383 aa6.57□□□□□ -1.36
TGFB3-205ENST00000556507 ZNF511Q8NB15 262 aa6.57□□□□□ -1.36
TGFB3-205ENST00000556507 AAASQ9NRG9 546 aa6.57□□□□□ -1.36
TGFB3-205ENST00000556507 NACADO15069 1562 aa6.57□□□□□ -1.36
TGFB3-205ENST00000556507 AXIN1O15169 862 aa6.56□□□□□ -1.36
TGFB3-205ENST00000556507 SIAH2O43255 324 aa6.56□□□□□ -1.36
TGFB3-205ENST00000556507 ALDH1A1P00352 501 aa6.56□□□□□ -1.36
TGFB3-205ENST00000556507 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.56□□□□□ -1.36
TGFB3-205ENST00000556507 CTDSPL2Q05D32 466 aa6.55□□□□□ -1.36
TGFB3-205ENST00000556507 CTC1Q2NKJ3 1217 aa6.55□□□□□ -1.36
TGFB3-205ENST00000556507 CRIPAKQ8N1N5 446 aa6.55□□□□□ -1.36
TGFB3-205ENST00000556507 IL27Q8NEV9 243 aa6.55□□□□□ -1.36
TGFB3-205ENST00000556507 VARSP26640 1264 aaKnown RBP6.54□□□□□ -1.36
TGFB3-205ENST00000556507 BRPF1P55201 1214 aaPredicted RBP6.54□□□□□ -1.36
TGFB3-205ENST00000556507 ARMC2Q8NEN0 867 aa6.54□□□□□ -1.36
TGFB3-205ENST00000556507 WASF2Q9Y6W5 498 aa6.54□□□□□ -1.36
TGFB3-205ENST00000556507 SMCPP49901 116 aaPredicted RBP6.53□□□□□ -1.36
TGFB3-205ENST00000556507 AGERQ15109 404 aa6.53□□□□□ -1.36
TGFB3-205ENST00000556507 FBXO31Q5XUX0 539 aaPredicted RBP6.53□□□□□ -1.36
TGFB3-205ENST00000556507 PPP2R2DQ66LE6 453 aa6.53□□□□□ -1.36
TGFB3-205ENST00000556507 HPS1Q92902 700 aa6.53□□□□□ -1.36
TGFB3-205ENST00000556507 ABCC9O60706 1549 aa6.53□□□□□ -1.36
TGFB3-205ENST00000556507 AP1G2O75843 785 aa6.52□□□□□ -1.37
TGFB3-205ENST00000556507 FOXJ1Q92949 421 aa6.52□□□□□ -1.37
TGFB3-205ENST00000556507 PCMTD1Q96MG8 357 aaPredicted RBP6.52□□□□□ -1.37
TGFB3-205ENST00000556507 GOPCQ9HD26 462 aa6.52□□□□□ -1.37
TGFB3-205ENST00000556507 SCRIBQ14160 1630 aa6.51□□□□□ -1.37
TGFB3-205ENST00000556507 POTECB2RU33 542 aa6.51□□□□□ -1.37
TGFB3-205ENST00000556507 NBPF14Q5TI25 921 aa6.51□□□□□ -1.37
TGFB3-205ENST00000556507 BPHLQ86WA6 291 aaPredicted RBP6.51□□□□□ -1.37
TGFB3-205ENST00000556507 FAM174AQ8TBP5 190 aa6.51□□□□□ -1.37
TGFB3-205ENST00000556507 LRRN4Q8WUT4 740 aa6.51□□□□□ -1.37
TGFB3-205ENST00000556507 DACH1Q9UI36 760 aa6.51□□□□□ -1.37
TGFB3-205ENST00000556507 TLL2Q9Y6L7 1015 aa6.51□□□□□ -1.37
TGFB3-205ENST00000556507 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
TGFB3-205ENST00000556507 ARID5BQ14865 1188 aa6.49□□□□□ -1.37
TGFB3-205ENST00000556507 MPNDQ8N594 471 aa6.49□□□□□ -1.37
TGFB3-205ENST00000556507 RFC5P40937 340 aa6.48□□□□□ -1.37
TGFB3-205ENST00000556507 NR6A1Q15406 480 aa6.48□□□□□ -1.37
TGFB3-205ENST00000556507 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
TGFB3-205ENST00000556507 GPKOWQ92917 476 aaPredicted RBP eCLIP6.48□□□□□ -1.37
TGFB3-205ENST00000556507 GMPR2Q9P2T1 348 aaKnown RBP6.48□□□□□ -1.37
TGFB3-205ENST00000556507 MAGEB6P1A0A0J9YX57 407 aa6.47□□□□□ -1.37
TGFB3-205ENST00000556507 CDK15Q96Q40 435 aa6.47□□□□□ -1.37
TGFB3-205ENST00000556507 ATP13A2Q9NQ11 1180 aa6.47□□□□□ -1.37
TGFB3-205ENST00000556507 FKBPLQ9UIM3 349 aa6.47□□□□□ -1.37
TGFB3-205ENST00000556507 C11orf95C9JLR9 678 aaPredicted RBP6.46□□□□□ -1.38
TGFB3-205ENST00000556507 CAPN5O15484 640 aaPredicted RBP6.46□□□□□ -1.38
TGFB3-205ENST00000556507 ADH1CP00326 375 aa6.46□□□□□ -1.38
TGFB3-205ENST00000556507 USP17L8P0C7I0 530 aa6.46□□□□□ -1.38
TGFB3-205ENST00000556507 NNTQ13423 1086 aa6.46□□□□□ -1.38
TGFB3-205ENST00000556507 TMEM259Q4ZIN3 620 aa6.46□□□□□ -1.38
TGFB3-205ENST00000556507 SH3BP5LQ7L8J4 393 aa6.46□□□□□ -1.38
TGFB3-205ENST00000556507 SH3RF1Q7Z6J0 888 aa6.46□□□□□ -1.38
TGFB3-205ENST00000556507 PDXDC2PQ6P474 469 aa6.45□□□□□ -1.38
TGFB3-205ENST00000556507 CARD14Q9BXL6 1004 aa6.45□□□□□ -1.38
TGFB3-205ENST00000556507 RB1CC1Q8TDY2 1594 aa6.44□□□□□ -1.38
TGFB3-205ENST00000556507 PNMA1Q8ND90 353 aa6.44□□□□□ -1.38
TGFB3-205ENST00000556507 EPS8L1Q8TE68 723 aa6.44□□□□□ -1.38
TGFB3-205ENST00000556507 ZNF775Q96BV0 537 aaPredicted RBP6.44□□□□□ -1.38
TGFB3-205ENST00000556507 ARHGAP9Q9BRR9 750 aa6.44□□□□□ -1.38
TGFB3-205ENST00000556507 C1QTNF2Q9BXJ5 285 aa6.44□□□□□ -1.38
TGFB3-205ENST00000556507 SENP2Q9HC62 589 aa6.44□□□□□ -1.38
TGFB3-205ENST00000556507 HMX1Q9NP08 348 aaPredicted RBP6.44□□□□□ -1.38
TGFB3-205ENST00000556507 ZC3H4Q9UPT8 1303 aaKnown RBP6.44□□□□□ -1.38
TGFB3-205ENST00000556507 PRKCSHP14314 528 aaPredicted RBP6.43□□□□□ -1.38
TGFB3-205ENST00000556507 GRM5P41594 1212 aa6.43□□□□□ -1.38
TGFB3-205ENST00000556507 WDR4P57081 412 aaKnown RBP6.43□□□□□ -1.38
TGFB3-205ENST00000556507 NR5A1Q13285 461 aa6.43□□□□□ -1.38
TGFB3-205ENST00000556507 VASH1Q7L8A9 365 aaPredicted RBP6.43□□□□□ -1.38
TGFB3-205ENST00000556507 PTK2Q05397 1052 aa6.42□□□□□ -1.38
TGFB3-205ENST00000556507 ERFEQ4G0M1 354 aa6.42□□□□□ -1.38
TGFB3-205ENST00000556507 ZBTB33Q86T24 672 aa6.42□□□□□ -1.38
TGFB3-205ENST00000556507 TRMT44Q8IYL2 757 aaKnown RBP6.42□□□□□ -1.38
TGFB3-205ENST00000556507 MAP4K5Q9Y4K4 846 aa6.42□□□□□ -1.38
TGFB3-205ENST00000556507 BMP1P13497 986 aa6.41□□□□□ -1.38
TGFB3-205ENST00000556507 TIMP2P16035 220 aa6.41□□□□□ -1.38
TGFB3-205ENST00000556507 FSHRP23945 695 aa6.41□□□□□ -1.38
TGFB3-205ENST00000556507 KIFC2Q96AC6 838 aa6.41□□□□□ -1.38
TGFB3-205ENST00000556507 TRIM47Q96LD4 638 aa6.41□□□□□ -1.38
TGFB3-205ENST00000556507 ZIC2O95409 532 aaPredicted RBP6.4□□□□□ -1.38
TGFB3-205ENST00000556507 NR3C2P08235 984 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms