RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 AP1G2O75843 785 aa8.26□□□□□ -1.09
TDP1-215ENST00000556498 Q3C1V9 767 aa8.26□□□□□ -1.09
TDP1-215ENST00000556498 SCUBE3Q8IX30 993 aa8.26□□□□□ -1.09
TDP1-215ENST00000556498 SYMPKQ92797 1274 aaKnown RBP8.26□□□□□ -1.09
TDP1-215ENST00000556498 ZNF622Q969S3 477 aaKnown RBP eCLIP8.26□□□□□ -1.09
TDP1-215ENST00000556498 BRPF3Q9ULD4 1205 aa8.26□□□□□ -1.09
TDP1-215ENST00000556498 RBM19Q9Y4C8 960 aaKnown RBP8.26□□□□□ -1.09
TDP1-215ENST00000556498 PCDHB3Q9Y5E6 796 aa8.26□□□□□ -1.09
TDP1-215ENST00000556498 CENPJQ9HC77 1338 aaPredicted RBP8.26□□□□□ -1.09
TDP1-215ENST00000556498 HSP90AA2PQ14568 343 aaPredicted RBP8.25□□□□□ -1.09
TDP1-215ENST00000556498 DIEXFQ68CQ4 756 aaKnown RBP8.25□□□□□ -1.09
TDP1-215ENST00000556498 CHMP4BQ9H444 224 aaKnown RBP8.25□□□□□ -1.09
TDP1-215ENST00000556498 CFAP99D6REC4 459 aa8.24□□□□□ -1.09
TDP1-215ENST00000556498 NR1I2O75469 434 aa8.24□□□□□ -1.09
TDP1-215ENST00000556498 NYAP1Q6ZVC0 841 aa8.24□□□□□ -1.09
TDP1-215ENST00000556498 WWC1Q8IX03 1113 aa8.24□□□□□ -1.09
TDP1-215ENST00000556498 DNAJC2Q99543 621 aaKnown RBP8.24□□□□□ -1.09
TDP1-215ENST00000556498 SOCS7O14512 581 aa8.23□□□□□ -1.09
TDP1-215ENST00000556498 MAFGO15525 162 aa8.23□□□□□ -1.09
TDP1-215ENST00000556498 GTF2E1P29083 439 aaPredicted RBP8.23□□□□□ -1.09
TDP1-215ENST00000556498 CTDSPL2Q05D32 466 aa8.23□□□□□ -1.09
TDP1-215ENST00000556498 BRICD5Q6PL45 260 aa8.23□□□□□ -1.09
TDP1-215ENST00000556498 BLOC1S3Q6QNY0 202 aa8.23□□□□□ -1.09
TDP1-215ENST00000556498 RETREG3Q86VR2 466 aa8.23□□□□□ -1.09
TDP1-215ENST00000556498 MTMR14Q8NCE2 650 aa8.23□□□□□ -1.09
TDP1-215ENST00000556498 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
TDP1-215ENST00000556498 A6NJR5 290 aa8.22□□□□□ -1.09
TDP1-215ENST00000556498 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
TDP1-215ENST00000556498 ANP32AP39687 249 aaKnown RBP8.22□□□□□ -1.09
TDP1-215ENST00000556498 RNF19BQ6ZMZ0 732 aa8.22□□□□□ -1.09
TDP1-215ENST00000556498 HELBQ8NG08 1087 aaPredicted RBP8.22□□□□□ -1.09
TDP1-215ENST00000556498 CLUAP1Q96AJ1 413 aa8.22□□□□□ -1.09
TDP1-215ENST00000556498 TRIM44Q96DX7 344 aaPredicted RBP8.22□□□□□ -1.09
TDP1-215ENST00000556498 THAP11Q96EK4 314 aa8.22□□□□□ -1.09
TDP1-215ENST00000556498 FAM193AP78312 1265 aa8.21□□□□□ -1.1
TDP1-215ENST00000556498 PCDH10Q9P2E7 1040 aa8.21□□□□□ -1.1
TDP1-215ENST00000556498 FMNL1O95466 1100 aaPredicted RBP8.2□□□□□ -1.1
TDP1-215ENST00000556498 MMP14P50281 582 aa8.2□□□□□ -1.1
TDP1-215ENST00000556498 PTPN5P54829 565 aa8.2□□□□□ -1.1
TDP1-215ENST00000556498 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
TDP1-215ENST00000556498 CERS3Q8IU89 383 aa8.2□□□□□ -1.1
TDP1-215ENST00000556498 USB1Q9BQ65 265 aaKnown RBP8.2□□□□□ -1.1
TDP1-215ENST00000556498 PRDM10Q9NQV6 1147 aa8.2□□□□□ -1.1
TDP1-215ENST00000556498 ANAPC15P60006 121 aa8.19□□□□□ -1.1
TDP1-215ENST00000556498 TSC1Q92574 1164 aa8.19□□□□□ -1.1
TDP1-215ENST00000556498 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
TDP1-215ENST00000556498 COG6Q9Y2V7 657 aa8.19□□□□□ -1.1
TDP1-215ENST00000556498 APBB1O00213 710 aa8.18□□□□□ -1.1
TDP1-215ENST00000556498 RAD21O60216 631 aa8.18□□□□□ -1.1
TDP1-215ENST00000556498 COPS2P61201 443 aa8.18□□□□□ -1.1
TDP1-215ENST00000556498 FAM43AQ8N2R8 423 aa8.18□□□□□ -1.1
TDP1-215ENST00000556498 GPATCH11Q8N954 259 aa8.17□□□□□ -1.1
TDP1-215ENST00000556498 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
TDP1-215ENST00000556498 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
TDP1-215ENST00000556498 PER1O15534 1290 aaPredicted RBP8.16□□□□□ -1.1
TDP1-215ENST00000556498 LYPD8Q6UX82 237 aa8.16□□□□□ -1.1
TDP1-215ENST00000556498 FNBP4Q8N3X1 1017 aaPredicted RBP8.16□□□□□ -1.1
TDP1-215ENST00000556498 CEP120Q8N960 986 aa8.16□□□□□ -1.1
TDP1-215ENST00000556498 SPSB2Q99619 263 aa8.16□□□□□ -1.1
TDP1-215ENST00000556498 MTRQ99707 1265 aa8.16□□□□□ -1.1
TDP1-215ENST00000556498 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
TDP1-215ENST00000556498 USP35Q9P2H5 1018 aa8.16□□□□□ -1.1
TDP1-215ENST00000556498 PRDM4Q9UKN5 801 aa8.16□□□□□ -1.1
TDP1-215ENST00000556498 TRAK2O60296 914 aa8.15□□□□□ -1.1
TDP1-215ENST00000556498 ZPR1O75312 459 aa8.15□□□□□ -1.1
TDP1-215ENST00000556498 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.1
TDP1-215ENST00000556498 FAM160A2Q8N612 972 aaPredicted RBP8.15□□□□□ -1.1
TDP1-215ENST00000556498 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
TDP1-215ENST00000556498 GDPD2Q9HCC8 539 aa8.15□□□□□ -1.1
TDP1-215ENST00000556498 PRM3Q9NNZ6 103 aa8.15□□□□□ -1.1
TDP1-215ENST00000556498 HSP90AA1P07900 732 aaKnown RBP8.14□□□□□ -1.11
TDP1-215ENST00000556498 MSS51Q4VC12 460 aa8.14□□□□□ -1.11
TDP1-215ENST00000556498 PROSER2Q86WR7 435 aaPredicted RBP8.14□□□□□ -1.11
TDP1-215ENST00000556498 SPNS2Q8IVW8 549 aa8.14□□□□□ -1.11
TDP1-215ENST00000556498 JUNDP17535 347 aa8.13□□□□□ -1.11
TDP1-215ENST00000556498 TMED8Q6PL24 325 aaPredicted RBP8.13□□□□□ -1.11
TDP1-215ENST00000556498 RGS22Q8NE09 1264 aa8.13□□□□□ -1.11
TDP1-215ENST00000556498 PRDM16Q9HAZ2 1276 aa8.13□□□□□ -1.11
TDP1-215ENST00000556498 IL21Q9HBE4 155 aa8.13□□□□□ -1.11
TDP1-215ENST00000556498 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
TDP1-215ENST00000556498 EPS8L1Q8TE68 723 aa8.12□□□□□ -1.11
TDP1-215ENST00000556498 ZNF516Q92618 1163 aa8.12□□□□□ -1.11
TDP1-215ENST00000556498 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
TDP1-215ENST00000556498 NDUFB9Q9Y6M9 179 aa8.12□□□□□ -1.11
TDP1-215ENST00000556498 WASHC2CQ9Y4E1 1318 aa8.11□□□□□ -1.11
TDP1-215ENST00000556498 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
TDP1-215ENST00000556498 TLL1O43897 1013 aa8.11□□□□□ -1.11
TDP1-215ENST00000556498 DXOO77932 396 aaKnown RBP8.11□□□□□ -1.11
TDP1-215ENST00000556498 ADH1BP00325 375 aa8.11□□□□□ -1.11
TDP1-215ENST00000556498 MMP16P51512 607 aa8.11□□□□□ -1.11
TDP1-215ENST00000556498 NR6A1Q15406 480 aa8.11□□□□□ -1.11
TDP1-215ENST00000556498 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
TDP1-215ENST00000556498 HCSTQ9UBK5 93 aa8.11□□□□□ -1.11
TDP1-215ENST00000556498 LAS1LQ9Y4W2 734 aaKnown RBP8.11□□□□□ -1.11
TDP1-215ENST00000556498 ABL2P42684 1182 aa8.1□□□□□ -1.11
TDP1-215ENST00000556498 IRX3P78415 501 aaPredicted RBP8.1□□□□□ -1.11
TDP1-215ENST00000556498 PTPRNQ16849 979 aa8.1□□□□□ -1.11
TDP1-215ENST00000556498 TAF3Q5VWG9 929 aa8.1□□□□□ -1.11
TDP1-215ENST00000556498 GPR37L1O60883 481 aa8.09□□□□□ -1.11
TDP1-215ENST00000556498 PDCL3Q9H2J4 239 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms