RNA–Protein interactions for RNA: ENST00000556416.1

CLMN-205, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 1,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-205ENST00000556416 TTC21BQ7Z4L5 1316 aa31.83■■■□□ 2.69
CLMN-205ENST00000556416 GGNBP2Q9H3C7 697 aa31.82■■■□□ 2.68
CLMN-205ENST00000556416 MORC1Q86VD1 984 aa31.81■■■□□ 2.68
CLMN-205ENST00000556416 NME9Q86XW9 330 aa31.79■■■□□ 2.68
CLMN-205ENST00000556416 PIK3C2AO00443 1686 aa31.79■■■□□ 2.68
CLMN-205ENST00000556416 CCDC184Q52MB2 194 aa31.78■■■□□ 2.68
CLMN-205ENST00000556416 TTC21AQ8NDW8 1320 aa31.77■■■□□ 2.68
CLMN-205ENST00000556416 PPP2R1AP30153 589 aa31.76■■■□□ 2.68
CLMN-205ENST00000556416 TRPM3Q9HCF6 1732 aaPredicted RBP31.76■■■□□ 2.67
CLMN-205ENST00000556416 BRD4O60885 1362 aaPredicted RBP31.76■■■□□ 2.67
CLMN-205ENST00000556416 NLRP13Q86W25 1043 aa31.76■■■□□ 2.67
CLMN-205ENST00000556416 FOXO3O43524 673 aa31.75■■■□□ 2.67
CLMN-205ENST00000556416 SLAIN2Q9P270 581 aa31.75■■■□□ 2.67
CLMN-205ENST00000556416 PSME1Q06323 249 aa31.74■■■□□ 2.67
CLMN-205ENST00000556416 MRS2Q9HD23 443 aa31.74■■■□□ 2.67
CLMN-205ENST00000556416 ZRANB1Q9UGI0 708 aa31.73■■■□□ 2.67
CLMN-205ENST00000556416 USP54Q70EL1 1684 aa31.72■■■□□ 2.67
CLMN-205ENST00000556416 TNNT2P45379 298 aaPredicted RBP31.72■■■□□ 2.67
CLMN-205ENST00000556416 MARF1Q9Y4F3 1742 aaKnown RBP31.72■■■□□ 2.67
CLMN-205ENST00000556416 OVOS2A0A0J9YW53 1432 aa31.7■■■□□ 2.67
CLMN-205ENST00000556416 OVOS2Q6IE36 1432 aa31.7■■■□□ 2.67
CLMN-205ENST00000556416 BRINP3Q76B58 766 aa31.7■■■□□ 2.67
CLMN-205ENST00000556416 XPCQ01831 940 aaPredicted RBP31.68■■■□□ 2.66
CLMN-205ENST00000556416 COG3Q96JB2 828 aa31.68■■■□□ 2.66
CLMN-205ENST00000556416 PAK3O75914 559 aaPredicted RBP31.68■■■□□ 2.66
CLMN-205ENST00000556416 KRT28Q7Z3Y7 464 aa31.66■■■□□ 2.66
CLMN-205ENST00000556416 USP31Q70CQ4 1352 aa31.66■■■□□ 2.66
CLMN-205ENST00000556416 MAP2P11137 1827 aaKnown RBP31.66■■■□□ 2.66
CLMN-205ENST00000556416 NPHP3Q7Z494 1330 aa31.65■■■□□ 2.66
CLMN-205ENST00000556416 ALS2Q96Q42 1657 aa31.65■■■□□ 2.66
CLMN-205ENST00000556416 NHSL1Q5SYE7 1610 aa31.65■■■□□ 2.66
CLMN-205ENST00000556416 PXDNQ92626 1479 aa31.64■■■□□ 2.66
CLMN-205ENST00000556416 DDX17Q92841 729 aaKnown RBP31.64■■■□□ 2.66
CLMN-205ENST00000556416 SCAF1Q9H7N4 1312 aaKnown RBP31.63■■■□□ 2.65
CLMN-205ENST00000556416 ROBO1Q9Y6N7 1651 aa31.63■■■□□ 2.65
CLMN-205ENST00000556416 ABTB2Q8N961 1025 aa31.62■■■□□ 2.65
CLMN-205ENST00000556416 NLRP6P59044 892 aa31.58■■■□□ 2.65
CLMN-205ENST00000556416 NUTM2GQ5VZR2 741 aa31.58■■■□□ 2.65
CLMN-205ENST00000556416 IQSEC2Q5JU85 1478 aa31.58■■■□□ 2.65
CLMN-205ENST00000556416 SBNO1A3KN83 1393 aa31.57■■■□□ 2.64
CLMN-205ENST00000556416 AATKQ6ZMQ8 1374 aa31.57■■■□□ 2.64
CLMN-205ENST00000556416 MTHFSP49914 203 aa31.56■■■□□ 2.64
CLMN-205ENST00000556416 FBLN1P23142 703 aa31.55■■■□□ 2.64
CLMN-205ENST00000556416 TNS3Q68CZ2 1445 aa31.54■■■□□ 2.64
CLMN-205ENST00000556416 PNISRQ8TF01 805 aaKnown RBP31.53■■■□□ 2.64
CLMN-205ENST00000556416 SMG6Q86US8 1419 aaKnown RBP31.52■■■□□ 2.64
CLMN-205ENST00000556416 SHPRHQ149N8 1683 aa31.52■■■□□ 2.64
CLMN-205ENST00000556416 FAM9BQ8IZU0 186 aa31.52■■■□□ 2.64
CLMN-205ENST00000556416 LMOD2Q6P5Q4 547 aa31.51■■■□□ 2.64
CLMN-205ENST00000556416 SOS2Q07890 1332 aaPredicted RBP31.51■■■□□ 2.63
CLMN-205ENST00000556416 POLKQ9UBT6 870 aa31.51■■■□□ 2.63
CLMN-205ENST00000556416 AHDC1Q5TGY3 1603 aaPredicted RBP31.49■■■□□ 2.63
CLMN-205ENST00000556416 SLIT3O75094 1523 aa31.49■■■□□ 2.63
CLMN-205ENST00000556416 YTHDC1Q96MU7 727 aaKnown RBP31.49■■■□□ 2.63
CLMN-205ENST00000556416 SOX12O15370 315 aa31.48■■■□□ 2.63
CLMN-205ENST00000556416 TOM1O60784 492 aa31.48■■■□□ 2.63
CLMN-205ENST00000556416 SPATA31A3Q5VYP0 1347 aa31.48■■■□□ 2.63
CLMN-205ENST00000556416 RRS1Q15050 365 aaKnown RBP31.48■■■□□ 2.63
CLMN-205ENST00000556416 CFAP53Q96M91 514 aa31.48■■■□□ 2.63
CLMN-205ENST00000556416 EMILIN1Q9Y6C2 1016 aa31.48■■■□□ 2.63
CLMN-205ENST00000556416 COL3A1P02461 1466 aaPredicted RBP31.47■■■□□ 2.63
CLMN-205ENST00000556416 PEAK1Q9H792 1746 aa31.47■■■□□ 2.63
CLMN-205ENST00000556416 NFAT5O94916 1531 aa31.47■■■□□ 2.63
CLMN-205ENST00000556416 LTN1O94822 1766 aa31.47■■■□□ 2.63
CLMN-205ENST00000556416 CRYBG1Q9Y4K1 1723 aa31.47■■■□□ 2.63
CLMN-205ENST00000556416 CDK12Q9NYV4 1490 aaPredicted RBP31.47■■■□□ 2.63
CLMN-205ENST00000556416 CERKQ8TCT0 537 aa31.46■■■□□ 2.63
CLMN-205ENST00000556416 PHRF1Q9P1Y6 1649 aaKnown RBP31.46■■■□□ 2.63
CLMN-205ENST00000556416 MED1Q15648 1581 aaPredicted RBP31.45■■■□□ 2.63
CLMN-205ENST00000556416 USP19O94966 1318 aa31.45■■■□□ 2.63
CLMN-205ENST00000556416 ARHGEF10O15013 1369 aa31.44■■■□□ 2.62
CLMN-205ENST00000556416 PPM1GO15355 546 aaPredicted RBP31.43■■■□□ 2.62
CLMN-205ENST00000556416 PNPLA6Q8IY17 1366 aa31.43■■■□□ 2.62
CLMN-205ENST00000556416 UBAP1LF5GYI3 381 aa31.42■■■□□ 2.62
CLMN-205ENST00000556416 PHLPP1O60346 1717 aa31.41■■■□□ 2.62
CLMN-205ENST00000556416 INSRP06213 1382 aa31.41■■■□□ 2.62
CLMN-205ENST00000556416 MAP3K19Q56UN5 1328 aa31.39■■■□□ 2.62
CLMN-205ENST00000556416 PLEKHG5O94827 1062 aa31.39■■■□□ 2.62
CLMN-205ENST00000556416 PIP4K2BP78356 416 aa31.39■■■□□ 2.62
CLMN-205ENST00000556416 WDR43Q15061 677 aaKnown RBP eCLIP31.39■■■□□ 2.62
CLMN-205ENST00000556416 KCNH5Q8NCM2 988 aa31.39■■■□□ 2.62
CLMN-205ENST00000556416 ABCA3Q99758 1704 aa31.38■■■□□ 2.61
CLMN-205ENST00000556416 GCP02774 474 aa31.35■■■□□ 2.61
CLMN-205ENST00000556416 COL16A1Q07092 1604 aaPredicted RBP31.35■■■□□ 2.61
CLMN-205ENST00000556416 ADAMTS8Q9UP79 889 aa31.33■■■□□ 2.61
CLMN-205ENST00000556416 FLT4P35916 1363 aa31.33■■■□□ 2.61
CLMN-205ENST00000556416 DIAPH1O60610 1272 aaKnown RBP31.33■■■□□ 2.61
CLMN-205ENST00000556416 KIF24Q5T7B8 1368 aa31.32■■■□□ 2.6
CLMN-205ENST00000556416 BLMP54132 1417 aaPredicted RBP31.31■■■□□ 2.6
CLMN-205ENST00000556416 AMPHP49418 695 aa31.3■■■□□ 2.6
CLMN-205ENST00000556416 RTL1A6NKG5 1358 aa31.3■■■□□ 2.6
CLMN-205ENST00000556416 CABLES1Q8TDN4 633 aa31.3■■■□□ 2.6
CLMN-205ENST00000556416 LRRC59Q96AG4 307 aaKnown RBP31.28■■■□□ 2.6
CLMN-205ENST00000556416 NUDCQ9Y266 331 aa31.28■■■□□ 2.6
CLMN-205ENST00000556416 COL22A1Q8NFW1 1626 aaPredicted RBP31.28■■■□□ 2.6
CLMN-205ENST00000556416 HSP90AB2PQ58FF8 381 aa31.27■■■□□ 2.6
CLMN-205ENST00000556416 HOXC9P31274 260 aa31.26■■■□□ 2.59
CLMN-205ENST00000556416 HNRNPUQ00839 825 aaKnown RBP eCLIP31.26■■■□□ 2.59
CLMN-205ENST00000556416 IL13P35225 146 aa31.25■■■□□ 2.59
CLMN-205ENST00000556416 ARHGEF25Q86VW2 580 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms