RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 MPNDQ8N594 471 aa8.01□□□□□ -1.13
SUPT16H-206ENST00000556309 SIAH2O43255 324 aa8□□□□□ -1.13
SUPT16H-206ENST00000556309 CSPP1Q1MSJ5 1256 aa8□□□□□ -1.13
SUPT16H-206ENST00000556309 RIC3Q7Z5B4 369 aa8□□□□□ -1.13
SUPT16H-206ENST00000556309 LIMD1Q9UGP4 676 aa8□□□□□ -1.13
SUPT16H-206ENST00000556309 ATP1B4Q9UN42 357 aaPredicted RBP8□□□□□ -1.13
SUPT16H-206ENST00000556309 PCDHGC3Q9UN70 934 aa8□□□□□ -1.13
SUPT16H-206ENST00000556309 PCDHB15Q9Y5E8 787 aa8□□□□□ -1.13
SUPT16H-206ENST00000556309 FDX1P10109 184 aa7.99□□□□□ -1.13
SUPT16H-206ENST00000556309 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
SUPT16H-206ENST00000556309 RSBN1LQ6PCB5 846 aaPredicted RBP7.99□□□□□ -1.13
SUPT16H-206ENST00000556309 PROCA1Q8NCQ7 364 aaPredicted RBP7.99□□□□□ -1.13
SUPT16H-206ENST00000556309 SYMPKQ92797 1274 aaKnown RBP7.99□□□□□ -1.13
SUPT16H-206ENST00000556309 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
SUPT16H-206ENST00000556309 SCARF1Q14162 830 aa7.98□□□□□ -1.13
SUPT16H-206ENST00000556309 DIXDC1Q155Q3 683 aa7.98□□□□□ -1.13
SUPT16H-206ENST00000556309 SH3D19Q5HYK7 790 aa7.98□□□□□ -1.13
SUPT16H-206ENST00000556309 TRIM46Q7Z4K8 759 aa7.98□□□□□ -1.13
SUPT16H-206ENST00000556309 RETREG3Q86VR2 466 aa7.98□□□□□ -1.13
SUPT16H-206ENST00000556309 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
SUPT16H-206ENST00000556309 CLK2P49760 499 aaKnown RBP7.97□□□□□ -1.13
SUPT16H-206ENST00000556309 NUDT12Q9BQG2 462 aa7.97□□□□□ -1.13
SUPT16H-206ENST00000556309 SPTLC1O15269 473 aa7.96□□□□□ -1.14
SUPT16H-206ENST00000556309 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
SUPT16H-206ENST00000556309 SKIV2LQ15477 1246 aaKnown RBP7.96□□□□□ -1.14
SUPT16H-206ENST00000556309 CABLES1Q8TDN4 633 aa7.96□□□□□ -1.14
SUPT16H-206ENST00000556309 C6orf229H3BNL8 230 aa7.95□□□□□ -1.14
SUPT16H-206ENST00000556309 RNF225M0QZC1 329 aaPredicted RBP7.95□□□□□ -1.14
SUPT16H-206ENST00000556309 BMP1P13497 986 aa7.94□□□□□ -1.14
SUPT16H-206ENST00000556309 VARSP26640 1264 aaKnown RBP7.94□□□□□ -1.14
SUPT16H-206ENST00000556309 QPCTQ16769 361 aa7.94□□□□□ -1.14
SUPT16H-206ENST00000556309 FBXO31Q5XUX0 539 aaPredicted RBP7.94□□□□□ -1.14
SUPT16H-206ENST00000556309 CCNYL3P0C7X3 344 aa7.93□□□□□ -1.14
SUPT16H-206ENST00000556309 PCMTD1Q96MG8 357 aaPredicted RBP7.93□□□□□ -1.14
SUPT16H-206ENST00000556309 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
SUPT16H-206ENST00000556309 HRCP23327 699 aa7.92□□□□□ -1.14
SUPT16H-206ENST00000556309 SUZ12Q15022 739 aaKnown RBP7.92□□□□□ -1.14
SUPT16H-206ENST00000556309 PTPRNQ16849 979 aa7.92□□□□□ -1.14
SUPT16H-206ENST00000556309 MRPL14Q6P1L8 145 aaKnown RBP7.92□□□□□ -1.14
SUPT16H-206ENST00000556309 NUTM2BA6NNL0 878 aaPredicted RBP7.91□□□□□ -1.14
SUPT16H-206ENST00000556309 NUTM2EB1AL46 878 aaPredicted RBP7.91□□□□□ -1.14
SUPT16H-206ENST00000556309 RTL5Q5HYW3 569 aaPredicted RBP7.91□□□□□ -1.14
SUPT16H-206ENST00000556309 NUTM2DQ5VT03 806 aaPredicted RBP7.91□□□□□ -1.14
SUPT16H-206ENST00000556309 NUTM2AQ8IVF1 878 aaPredicted RBP7.91□□□□□ -1.14
SUPT16H-206ENST00000556309 ERBB4Q15303 1308 aa7.91□□□□□ -1.14
SUPT16H-206ENST00000556309 LILRB3O75022 631 aa7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 ADH1CP00326 375 aa7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 GJA5P36382 358 aa7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 SH3BP2P78314 561 aa7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 MTMR2Q13614 643 aa7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 TMEM132AQ24JP5 1023 aa7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 ZBTB3Q9H5J0 574 aa7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 GOPCQ9HD26 462 aa7.9□□□□□ -1.14
SUPT16H-206ENST00000556309 EVA1BQ9NVM1 165 aa7.89□□□□□ -1.15
SUPT16H-206ENST00000556309 SPDYE5A6NIY4 337 aa7.88□□□□□ -1.15
SUPT16H-206ENST00000556309 CFAP99D6REC4 459 aa7.88□□□□□ -1.15
SUPT16H-206ENST00000556309 NNTQ13423 1086 aa7.88□□□□□ -1.15
SUPT16H-206ENST00000556309 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
SUPT16H-206ENST00000556309 PRPF38BQ5VTL8 546 aaKnown RBP7.88□□□□□ -1.15
SUPT16H-206ENST00000556309 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
SUPT16H-206ENST00000556309 PRR7Q8TB68 274 aa7.88□□□□□ -1.15
SUPT16H-206ENST00000556309 TSC1Q92574 1164 aa7.88□□□□□ -1.15
SUPT16H-206ENST00000556309 VEGFBP49765 207 aa7.87□□□□□ -1.15
SUPT16H-206ENST00000556309 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
SUPT16H-206ENST00000556309 UNC93B1Q9H1C4 597 aa7.87□□□□□ -1.15
SUPT16H-206ENST00000556309 KCNH2Q12809 1159 aa7.86□□□□□ -1.15
SUPT16H-206ENST00000556309 TMEM151AQ8N4L1 468 aa7.86□□□□□ -1.15
SUPT16H-206ENST00000556309 FAM174AQ8TBP5 190 aa7.86□□□□□ -1.15
SUPT16H-206ENST00000556309 UPP2O95045 317 aa7.85□□□□□ -1.15
SUPT16H-206ENST00000556309 ZNF511Q8NB15 262 aa7.85□□□□□ -1.15
SUPT16H-206ENST00000556309 TIMP2P16035 220 aa7.84□□□□□ -1.15
SUPT16H-206ENST00000556309 RFC5P40937 340 aa7.84□□□□□ -1.15
SUPT16H-206ENST00000556309 WDR4P57081 412 aaKnown RBP7.84□□□□□ -1.15
SUPT16H-206ENST00000556309 MAN1A2O60476 641 aa7.83□□□□□ -1.16
SUPT16H-206ENST00000556309 IGHA1P01876 353 aa7.83□□□□□ -1.16
SUPT16H-206ENST00000556309 NR5A1Q13285 461 aa7.83□□□□□ -1.16
SUPT16H-206ENST00000556309 PPP2R2DQ66LE6 453 aa7.83□□□□□ -1.16
SUPT16H-206ENST00000556309 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
SUPT16H-206ENST00000556309 PER1O15534 1290 aaPredicted RBP7.82□□□□□ -1.16
SUPT16H-206ENST00000556309 AP1G2O75843 785 aa7.82□□□□□ -1.16
SUPT16H-206ENST00000556309 CTDSPL2Q05D32 466 aa7.82□□□□□ -1.16
SUPT16H-206ENST00000556309 CDK15Q96Q40 435 aa7.82□□□□□ -1.16
SUPT16H-206ENST00000556309 GDF11O95390 407 aa7.81□□□□□ -1.16
SUPT16H-206ENST00000556309 BAP1Q92560 729 aa7.81□□□□□ -1.16
SUPT16H-206ENST00000556309 TLL2Q9Y6L7 1015 aa7.81□□□□□ -1.16
SUPT16H-206ENST00000556309 FOXK2Q01167 660 aa7.8□□□□□ -1.16
SUPT16H-206ENST00000556309 KCTD17Q8N5Z5 321 aa7.8□□□□□ -1.16
SUPT16H-206ENST00000556309 KLF16Q9BXK1 252 aaPredicted RBP7.8□□□□□ -1.16
SUPT16H-206ENST00000556309 PPFIA3O75145 1194 aa7.79□□□□□ -1.16
SUPT16H-206ENST00000556309 RASSF7Q02833 373 aa7.79□□□□□ -1.16
SUPT16H-206ENST00000556309 HELBQ8NG08 1087 aaPredicted RBP7.79□□□□□ -1.16
SUPT16H-206ENST00000556309 LRRN4Q8WUT4 740 aa7.79□□□□□ -1.16
SUPT16H-206ENST00000556309 LYPD8Q6UX82 237 aa7.78□□□□□ -1.16
SUPT16H-206ENST00000556309 GSK3AP49840 483 aa7.77□□□□□ -1.17
SUPT16H-206ENST00000556309 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
SUPT16H-206ENST00000556309 ZIC2O95409 532 aaPredicted RBP7.76□□□□□ -1.17
SUPT16H-206ENST00000556309 USP17L8P0C7I0 530 aa7.76□□□□□ -1.17
SUPT16H-206ENST00000556309 CTHP32929 405 aa7.76□□□□□ -1.17
SUPT16H-206ENST00000556309 MAP10Q9P2G4 905 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms