RNA–Protein interactions for RNA: ENST00000556116.1

LINC00639-203, long intergenic non-protein coding RNA 639, humanhuman

TSL 4

Gene LINC00639, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-203ENST00000556116 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
LINC00639-203ENST00000556116 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
LINC00639-203ENST00000556116 SEPT12Q8IYM1 358 aa12.64□□□□□ -0.39
LINC00639-203ENST00000556116 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
LINC00639-203ENST00000556116 L3MBTL2Q969R5 705 aa12.63□□□□□ -0.39
LINC00639-203ENST00000556116 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
LINC00639-203ENST00000556116 BTG4Q9NY30 223 aa12.63□□□□□ -0.39
LINC00639-203ENST00000556116 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
LINC00639-203ENST00000556116 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
LINC00639-203ENST00000556116 ACEP12821 1306 aa12.62□□□□□ -0.39
LINC00639-203ENST00000556116 THSD7AQ9UPZ6 1657 aa12.62□□□□□ -0.39
LINC00639-203ENST00000556116 NRKQ7Z2Y5 1582 aa12.62□□□□□ -0.39
LINC00639-203ENST00000556116 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
LINC00639-203ENST00000556116 ONECUT3O60422 494 aaPredicted RBP12.62□□□□□ -0.39
LINC00639-203ENST00000556116 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
LINC00639-203ENST00000556116 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
LINC00639-203ENST00000556116 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
LINC00639-203ENST00000556116 DEFB132Q7Z7B7 95 aa12.61□□□□□ -0.39
LINC00639-203ENST00000556116 KIAA0232Q92628 1395 aa12.6□□□□□ -0.39
LINC00639-203ENST00000556116 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
LINC00639-203ENST00000556116 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
LINC00639-203ENST00000556116 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
LINC00639-203ENST00000556116 LMO7Q8WWI1 1683 aa12.6□□□□□ -0.39
LINC00639-203ENST00000556116 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
LINC00639-203ENST00000556116 CAMTA1Q9Y6Y1 1673 aa12.58□□□□□ -0.4
LINC00639-203ENST00000556116 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
LINC00639-203ENST00000556116 BLMP54132 1417 aaPredicted RBP12.58□□□□□ -0.4
LINC00639-203ENST00000556116 ZC3H6P61129 1189 aaKnown RBP12.58□□□□□ -0.4
LINC00639-203ENST00000556116 PPIP5K1Q6PFW1 1433 aa12.58□□□□□ -0.4
LINC00639-203ENST00000556116 SPATA31A5Q5VU36 1347 aa12.58□□□□□ -0.4
LINC00639-203ENST00000556116 SPATA31A7Q8IWB4 1347 aa12.58□□□□□ -0.4
LINC00639-203ENST00000556116 CENPJQ9HC77 1338 aaPredicted RBP12.58□□□□□ -0.4
LINC00639-203ENST00000556116 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
LINC00639-203ENST00000556116 NEUROD1Q13562 356 aa12.57□□□□□ -0.4
LINC00639-203ENST00000556116 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
LINC00639-203ENST00000556116 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
LINC00639-203ENST00000556116 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
LINC00639-203ENST00000556116 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
LINC00639-203ENST00000556116 USP19O94966 1318 aa12.55□□□□□ -0.4
LINC00639-203ENST00000556116 SSH2Q76I76 1423 aa12.54□□□□□ -0.4
LINC00639-203ENST00000556116 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
LINC00639-203ENST00000556116 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
LINC00639-203ENST00000556116 SPATA31A1Q5TZJ5 1347 aa12.54□□□□□ -0.4
LINC00639-203ENST00000556116 COL18A1P39060 1754 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 A0A0G2JS52 829 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 MYT1Q01538 1121 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 CCDC125Q86Z20 511 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 RGPD5Q99666 1765 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 USP6P35125 1406 aa12.53□□□□□ -0.4
LINC00639-203ENST00000556116 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
LINC00639-203ENST00000556116 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
LINC00639-203ENST00000556116 SLIT3O75094 1523 aa12.52□□□□□ -0.41
LINC00639-203ENST00000556116 USP35Q9P2H5 1018 aa12.51□□□□□ -0.41
LINC00639-203ENST00000556116 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
LINC00639-203ENST00000556116 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
LINC00639-203ENST00000556116 CPDO75976 1380 aa12.5□□□□□ -0.41
LINC00639-203ENST00000556116 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
LINC00639-203ENST00000556116 GCP02774 474 aa12.49□□□□□ -0.41
LINC00639-203ENST00000556116 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
LINC00639-203ENST00000556116 MON2Q7Z3U7 1717 aa12.48□□□□□ -0.41
LINC00639-203ENST00000556116 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
LINC00639-203ENST00000556116 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
LINC00639-203ENST00000556116 CD163L1Q9NR16 1453 aa12.47□□□□□ -0.41
LINC00639-203ENST00000556116 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
LINC00639-203ENST00000556116 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
LINC00639-203ENST00000556116 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
LINC00639-203ENST00000556116 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
LINC00639-203ENST00000556116 CPSF1Q10570 1443 aaKnown RBP12.46□□□□□ -0.41
LINC00639-203ENST00000556116 NFAT5O94916 1531 aa12.46□□□□□ -0.42
LINC00639-203ENST00000556116 RREB1Q92766 1687 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 TTC21BQ7Z4L5 1316 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 EVC2Q86UK5 1308 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 ZBTB7CA1YPR0 619 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 TRIM37O94972 964 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 NLRP6P59044 892 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 EZH2Q15910 746 aaKnown RBP12.45□□□□□ -0.42
LINC00639-203ENST00000556116 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 SBF2Q86WG5 1849 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 NUP188Q5SRE5 1749 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
LINC00639-203ENST00000556116 SF3B2Q13435 895 aaKnown RBP12.44□□□□□ -0.42
LINC00639-203ENST00000556116 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
LINC00639-203ENST00000556116 LRP5O75197 1615 aa12.44□□□□□ -0.42
LINC00639-203ENST00000556116 USP54Q70EL1 1684 aa12.43□□□□□ -0.42
LINC00639-203ENST00000556116 SOX12O15370 315 aa12.43□□□□□ -0.42
LINC00639-203ENST00000556116 BAG6P46379 1132 aa12.43□□□□□ -0.42
LINC00639-203ENST00000556116 EVA1CP58658 441 aa12.43□□□□□ -0.42
LINC00639-203ENST00000556116 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
LINC00639-203ENST00000556116 TCP11L2Q8N4U5 519 aa12.42□□□□□ -0.42
LINC00639-203ENST00000556116 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
LINC00639-203ENST00000556116 CRB1P82279 1406 aa12.42□□□□□ -0.42
LINC00639-203ENST00000556116 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
LINC00639-203ENST00000556116 AATKQ6ZMQ8 1374 aa12.42□□□□□ -0.42
LINC00639-203ENST00000556116 LTN1O94822 1766 aa12.41□□□□□ -0.42
LINC00639-203ENST00000556116 ARHGEF25Q86VW2 580 aa12.41□□□□□ -0.42
LINC00639-203ENST00000556116 SBNO2Q9Y2G9 1366 aa12.41□□□□□ -0.42
LINC00639-203ENST00000556116 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms