RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
ATXN3-235ENST00000556082 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
ATXN3-235ENST00000556082 E9PCH4 1651 aa11.53□□□□□ -0.56
ATXN3-235ENST00000556082 RAPGEF3O95398 923 aa11.53□□□□□ -0.56
ATXN3-235ENST00000556082 CARD11Q9BXL7 1154 aa11.53□□□□□ -0.56
ATXN3-235ENST00000556082 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
ATXN3-235ENST00000556082 FRMPD1Q5SYB0 1578 aa11.53□□□□□ -0.56
ATXN3-235ENST00000556082 ZNF326Q5BKZ1 582 aaKnown RBP11.52□□□□□ -0.57
ATXN3-235ENST00000556082 DIP2BQ9P265 1576 aa11.52□□□□□ -0.57
ATXN3-235ENST00000556082 KIF7Q2M1P5 1343 aa11.52□□□□□ -0.57
ATXN3-235ENST00000556082 EFCAB6Q5THR3 1501 aa11.51□□□□□ -0.57
ATXN3-235ENST00000556082 RGL3Q3MIN7 710 aa11.51□□□□□ -0.57
ATXN3-235ENST00000556082 VPS9D1Q9Y2B5 631 aa11.51□□□□□ -0.57
ATXN3-235ENST00000556082 CNTLNQ9NXG0 1405 aa11.51□□□□□ -0.57
ATXN3-235ENST00000556082 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
ATXN3-235ENST00000556082 ZMYM4Q5VZL5 1548 aa11.5□□□□□ -0.57
ATXN3-235ENST00000556082 LAMC1P11047 1609 aa11.49□□□□□ -0.57
ATXN3-235ENST00000556082 RICTORQ6R327 1708 aa11.49□□□□□ -0.57
ATXN3-235ENST00000556082 FBXW7Q969H0 707 aa11.49□□□□□ -0.57
ATXN3-235ENST00000556082 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
ATXN3-235ENST00000556082 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
ATXN3-235ENST00000556082 ARHGAP31Q2M1Z3 1444 aa11.48□□□□□ -0.57
ATXN3-235ENST00000556082 DIP2CQ9Y2E4 1556 aa11.48□□□□□ -0.57
ATXN3-235ENST00000556082 TRPM1Q7Z4N2 1603 aa11.47□□□□□ -0.57
ATXN3-235ENST00000556082 PHF14O94880 888 aa11.47□□□□□ -0.57
ATXN3-235ENST00000556082 YTHDC1Q96MU7 727 aaKnown RBP11.47□□□□□ -0.57
ATXN3-235ENST00000556082 CLTCL1P53675 1640 aa11.46□□□□□ -0.57
ATXN3-235ENST00000556082 ABCC3O15438 1527 aa11.46□□□□□ -0.57
ATXN3-235ENST00000556082 WASHC2CQ9Y4E1 1318 aa11.46□□□□□ -0.57
ATXN3-235ENST00000556082 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
ATXN3-235ENST00000556082 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
ATXN3-235ENST00000556082 POLR1AO95602 1720 aaPredicted RBP11.46□□□□□ -0.58
ATXN3-235ENST00000556082 NPATQ14207 1427 aa11.45□□□□□ -0.58
ATXN3-235ENST00000556082 NBPF1Q3BBV0 1214 aa11.45□□□□□ -0.58
ATXN3-235ENST00000556082 GGT6Q6P531 493 aa11.45□□□□□ -0.58
ATXN3-235ENST00000556082 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
ATXN3-235ENST00000556082 PCDHGA10Q9Y5H3 936 aa11.45□□□□□ -0.58
ATXN3-235ENST00000556082 CEP152O94986 1710 aa11.45□□□□□ -0.58
ATXN3-235ENST00000556082 PPRC1Q5VV67 1664 aaKnown RBP11.45□□□□□ -0.58
ATXN3-235ENST00000556082 REREQ9P2R6 1566 aa11.45□□□□□ -0.58
ATXN3-235ENST00000556082 NOS1P29475 1434 aa11.44□□□□□ -0.58
ATXN3-235ENST00000556082 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
ATXN3-235ENST00000556082 RPGRIP1LQ68CZ1 1315 aa11.44□□□□□ -0.58
ATXN3-235ENST00000556082 BHMG1C9JSJ3 638 aaPredicted RBP11.44□□□□□ -0.58
ATXN3-235ENST00000556082 TYW1BQ6NUM6 668 aa11.44□□□□□ -0.58
ATXN3-235ENST00000556082 EPAS1Q99814 870 aa11.44□□□□□ -0.58
ATXN3-235ENST00000556082 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
ATXN3-235ENST00000556082 MYOM2P54296 1465 aa11.44□□□□□ -0.58
ATXN3-235ENST00000556082 AGLP35573 1532 aa11.43□□□□□ -0.58
ATXN3-235ENST00000556082 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
ATXN3-235ENST00000556082 TESK2Q96S53 571 aa11.42□□□□□ -0.58
ATXN3-235ENST00000556082 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
ATXN3-235ENST00000556082 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
ATXN3-235ENST00000556082 MADDQ8WXG6 1647 aa11.42□□□□□ -0.58
ATXN3-235ENST00000556082 PPP1R3GB7ZBB8 358 aa11.41□□□□□ -0.58
ATXN3-235ENST00000556082 SLC52A1Q9NWF4 448 aa11.41□□□□□ -0.58
ATXN3-235ENST00000556082 ZC3H13Q5T200 1668 aaKnown RBP11.4□□□□□ -0.58
ATXN3-235ENST00000556082 NBPF3Q9H094 633 aa11.4□□□□□ -0.58
ATXN3-235ENST00000556082 ADGRB3O60242 1522 aa11.4□□□□□ -0.59
ATXN3-235ENST00000556082 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
ATXN3-235ENST00000556082 KCTD12Q96CX2 325 aaKnown RBP11.39□□□□□ -0.59
ATXN3-235ENST00000556082 KIAA1210Q9ULL0 1709 aa11.39□□□□□ -0.59
ATXN3-235ENST00000556082 KTN1Q86UP2 1357 aaKnown RBP11.39□□□□□ -0.59
ATXN3-235ENST00000556082 SCAF11Q99590 1463 aaKnown RBP11.38□□□□□ -0.59
ATXN3-235ENST00000556082 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
ATXN3-235ENST00000556082 DPYSL4O14531 572 aa11.38□□□□□ -0.59
ATXN3-235ENST00000556082 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
ATXN3-235ENST00000556082 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
ATXN3-235ENST00000556082 CAMSAP1Q5T5Y3 1602 aa11.38□□□□□ -0.59
ATXN3-235ENST00000556082 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
ATXN3-235ENST00000556082 TMF1P82094 1093 aa11.37□□□□□ -0.59
ATXN3-235ENST00000556082 RABGEF1Q9UJ41 708 aa11.37□□□□□ -0.59
ATXN3-235ENST00000556082 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
ATXN3-235ENST00000556082 UGGT1Q9NYU2 1555 aa11.37□□□□□ -0.59
ATXN3-235ENST00000556082 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
ATXN3-235ENST00000556082 ARIH1Q9Y4X5 557 aaPredicted RBP11.36□□□□□ -0.59
ATXN3-235ENST00000556082 KIF1BO60333 1816 aa11.36□□□□□ -0.59
ATXN3-235ENST00000556082 ADGRF5Q8IZF2 1346 aa11.35□□□□□ -0.59
ATXN3-235ENST00000556082 ZFYVE9O95405 1425 aa11.35□□□□□ -0.59
ATXN3-235ENST00000556082 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
ATXN3-235ENST00000556082 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-235ENST00000556082 C14orf93Q9H972 538 aaKnown RBP11.35□□□□□ -0.59
ATXN3-235ENST00000556082 WDR70Q9NW82 654 aa11.35□□□□□ -0.59
ATXN3-235ENST00000556082 EIF3AQ14152 1382 aaKnown RBP11.35□□□□□ -0.59
ATXN3-235ENST00000556082 IDI1Q13907 227 aa11.34□□□□□ -0.59
ATXN3-235ENST00000556082 RALBP1Q15311 655 aa11.34□□□□□ -0.59
ATXN3-235ENST00000556082 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
ATXN3-235ENST00000556082 KIF13AQ9H1H9 1805 aa11.34□□□□□ -0.59
ATXN3-235ENST00000556082 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 IFT172Q9UG01 1749 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
ATXN3-235ENST00000556082 PDIA6Q15084 440 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 E2F4Q16254 413 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 CFAP70Q5T0N1 1121 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 PIK3C2GO75747 1445 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 SYNMO15061 1565 aa11.33□□□□□ -0.6
ATXN3-235ENST00000556082 DISP3Q9P2K9 1392 aa11.32□□□□□ -0.6
ATXN3-235ENST00000556082 SBNO2Q9Y2G9 1366 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 466.9 ms