RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 FAM83GA6ND36 823 aa28.61■■■□□ 2.17
PRKCH-219ENST00000555906 POLR3AO14802 1390 aaPredicted RBP28.6■■■□□ 2.17
PRKCH-219ENST00000555906 CDK19Q9BWU1 502 aa28.58■■■□□ 2.17
PRKCH-219ENST00000555906 BLMP54132 1417 aaPredicted RBP28.58■■■□□ 2.17
PRKCH-219ENST00000555906 SEPT12Q8IYM1 358 aa28.57■■■□□ 2.16
PRKCH-219ENST00000555906 CCDC9Q9Y3X0 531 aaKnown RBP28.57■■■□□ 2.16
PRKCH-219ENST00000555906 ONECUT3O60422 494 aaPredicted RBP28.56■■■□□ 2.16
PRKCH-219ENST00000555906 PAK3O75914 559 aaPredicted RBP28.56■■■□□ 2.16
PRKCH-219ENST00000555906 NBPF1Q3BBV0 1214 aa28.56■■■□□ 2.16
PRKCH-219ENST00000555906 TRPM1Q7Z4N2 1603 aa28.56■■■□□ 2.16
PRKCH-219ENST00000555906 BTG4Q9NY30 223 aa28.54■■■□□ 2.16
PRKCH-219ENST00000555906 NRKQ7Z2Y5 1582 aa28.54■■■□□ 2.16
PRKCH-219ENST00000555906 CCDC61Q9Y6R9 512 aa28.53■■■□□ 2.16
PRKCH-219ENST00000555906 THSD7AQ9UPZ6 1657 aa28.53■■■□□ 2.16
PRKCH-219ENST00000555906 CENPJQ9HC77 1338 aaPredicted RBP28.52■■■□□ 2.16
PRKCH-219ENST00000555906 ACEP12821 1306 aa28.51■■■□□ 2.15
PRKCH-219ENST00000555906 PLEKHG3A1L390 1219 aa28.5■■■□□ 2.15
PRKCH-219ENST00000555906 PRDM11Q9NQV5 511 aa28.49■■■□□ 2.15
PRKCH-219ENST00000555906 SRCAPQ6ZRS2 3230 aa28.48■■■□□ 2.15
PRKCH-219ENST00000555906 PPIP5K1Q6PFW1 1433 aa28.48■■■□□ 2.15
PRKCH-219ENST00000555906 KIAA0232Q92628 1395 aa28.48■■■□□ 2.15
PRKCH-219ENST00000555906 KRT27Q7Z3Y8 459 aa28.47■■■□□ 2.15
PRKCH-219ENST00000555906 SPATA31A5Q5VU36 1347 aa28.46■■■□□ 2.15
PRKCH-219ENST00000555906 SPATA31A7Q8IWB4 1347 aa28.46■■■□□ 2.15
PRKCH-219ENST00000555906 NBPF8Q3BBV2 869 aa28.46■■■□□ 2.15
PRKCH-219ENST00000555906 L3MBTL2Q969R5 705 aa28.46■■■□□ 2.15
PRKCH-219ENST00000555906 RGPD1P0DJD0 1748 aa28.44■■■□□ 2.14
PRKCH-219ENST00000555906 FAM98CQ17RN3 349 aaKnown RBP28.44■■■□□ 2.14
PRKCH-219ENST00000555906 ZRANB1Q9UGI0 708 aa28.44■■■□□ 2.14
PRKCH-219ENST00000555906 LMO7Q8WWI1 1683 aa28.44■■■□□ 2.14
PRKCH-219ENST00000555906 A0A0G2JS52 829 aa28.43■■■□□ 2.14
PRKCH-219ENST00000555906 SRPK2P78362 688 aaKnown RBP28.43■■■□□ 2.14
PRKCH-219ENST00000555906 MYT1Q01538 1121 aa28.43■■■□□ 2.14
PRKCH-219ENST00000555906 BRD4O60885 1362 aaPredicted RBP28.42■■■□□ 2.14
PRKCH-219ENST00000555906 USP19O94966 1318 aa28.42■■■□□ 2.14
PRKCH-219ENST00000555906 SF3B2Q13435 895 aaKnown RBP28.4■■■□□ 2.14
PRKCH-219ENST00000555906 CPDO75976 1380 aa28.38■■■□□ 2.13
PRKCH-219ENST00000555906 NUTM2GQ5VZR2 741 aa28.38■■■□□ 2.13
PRKCH-219ENST00000555906 SIN3AQ96ST3 1273 aa28.38■■■□□ 2.13
PRKCH-219ENST00000555906 CABP2Q9NPB3 220 aa28.38■■■□□ 2.13
PRKCH-219ENST00000555906 TNS1Q9HBL0 1735 aaKnown RBP28.38■■■□□ 2.13
PRKCH-219ENST00000555906 USP6P35125 1406 aa28.37■■■□□ 2.13
PRKCH-219ENST00000555906 CHRNA2Q15822 529 aa28.37■■■□□ 2.13
PRKCH-219ENST00000555906 ABTB2Q8N961 1025 aa28.37■■■□□ 2.13
PRKCH-219ENST00000555906 SPATA31A1Q5TZJ5 1347 aa28.37■■■□□ 2.13
PRKCH-219ENST00000555906 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
PRKCH-219ENST00000555906 DEFB132Q7Z7B7 95 aa28.36■■■□□ 2.13
PRKCH-219ENST00000555906 SSH2Q76I76 1423 aa28.35■■■□□ 2.13
PRKCH-219ENST00000555906 AKAP12Q02952 1782 aa28.35■■■□□ 2.13
PRKCH-219ENST00000555906 ZC3H6P61129 1189 aaKnown RBP28.35■■■□□ 2.13
PRKCH-219ENST00000555906 PIK3C2AO00443 1686 aa28.35■■■□□ 2.13
PRKCH-219ENST00000555906 CAMTA1Q9Y6Y1 1673 aa28.35■■■□□ 2.13
PRKCH-219ENST00000555906 SLIT3O75094 1523 aa28.33■■■□□ 2.13
PRKCH-219ENST00000555906 EVC2Q86UK5 1308 aa28.32■■■□□ 2.12
PRKCH-219ENST00000555906 NLRP13Q86W25 1043 aa28.31■■■□□ 2.12
PRKCH-219ENST00000555906 STRN4Q9NRL3 753 aa28.31■■■□□ 2.12
PRKCH-219ENST00000555906 NEUROD1Q13562 356 aa28.29■■■□□ 2.12
PRKCH-219ENST00000555906 DISP2A7MBM2 1401 aa28.28■■■□□ 2.12
PRKCH-219ENST00000555906 BAG6P46379 1132 aa28.28■■■□□ 2.12
PRKCH-219ENST00000555906 CABP1Q9NZU7 370 aa28.28■■■□□ 2.12
PRKCH-219ENST00000555906 COL5A2P05997 1499 aaPredicted RBP28.27■■■□□ 2.12
PRKCH-219ENST00000555906 PARP4Q9UKK3 1724 aaKnown RBP28.27■■■□□ 2.12
PRKCH-219ENST00000555906 GCP02774 474 aa28.26■■■□□ 2.11
PRKCH-219ENST00000555906 MON2Q7Z3U7 1717 aa28.25■■■□□ 2.11
PRKCH-219ENST00000555906 LRP5O75197 1615 aa28.25■■■□□ 2.11
PRKCH-219ENST00000555906 SBNO2Q9Y2G9 1366 aa28.24■■■□□ 2.11
PRKCH-219ENST00000555906 BARGINQ6ZT62 677 aa28.24■■■□□ 2.11
PRKCH-219ENST00000555906 EVA1CP58658 441 aa28.23■■■□□ 2.11
PRKCH-219ENST00000555906 FAM182BQ5T319 152 aa28.23■■■□□ 2.11
PRKCH-219ENST00000555906 COL18A1P39060 1754 aa28.23■■■□□ 2.11
PRKCH-219ENST00000555906 WNK3Q9BYP7 1800 aa28.22■■■□□ 2.11
PRKCH-219ENST00000555906 LARP1Q6PKG0 1096 aaKnown RBP28.21■■■□□ 2.11
PRKCH-219ENST00000555906 USP35Q9P2H5 1018 aa28.2■■■□□ 2.1
PRKCH-219ENST00000555906 NLRP6P59044 892 aa28.19■■■□□ 2.1
PRKCH-219ENST00000555906 AATKQ6ZMQ8 1374 aa28.19■■■□□ 2.1
PRKCH-219ENST00000555906 CRB1P82279 1406 aa28.18■■■□□ 2.1
PRKCH-219ENST00000555906 TCP11L2Q8N4U5 519 aa28.18■■■□□ 2.1
PRKCH-219ENST00000555906 THRAP3Q9Y2W1 955 aaKnown RBP28.18■■■□□ 2.1
PRKCH-219ENST00000555906 USP54Q70EL1 1684 aa28.18■■■□□ 2.1
PRKCH-219ENST00000555906 CPSF1Q10570 1443 aaKnown RBP28.18■■■□□ 2.1
PRKCH-219ENST00000555906 FAM196AQ6ZSG2 479 aa28.17■■■□□ 2.1
PRKCH-219ENST00000555906 LRRC37A3O60309 1634 aa28.17■■■□□ 2.1
PRKCH-219ENST00000555906 ZNF692Q9BU19 519 aaPredicted RBP28.16■■■□□ 2.1
PRKCH-219ENST00000555906 RREB1Q92766 1687 aa28.16■■■□□ 2.1
PRKCH-219ENST00000555906 TTC21AQ8NDW8 1320 aa28.15■■■□□ 2.1
PRKCH-219ENST00000555906 EN1Q05925 392 aaPredicted RBP28.14■■■□□ 2.1
PRKCH-219ENST00000555906 TTC21BQ7Z4L5 1316 aa28.14■■■□□ 2.09
PRKCH-219ENST00000555906 NFAT5O94916 1531 aa28.13■■■□□ 2.09
PRKCH-219ENST00000555906 ABCC6O95255 1503 aa28.13■■■□□ 2.09
PRKCH-219ENST00000555906 TONSLQ96HA7 1378 aa28.13■■■□□ 2.09
PRKCH-219ENST00000555906 RGPD5Q99666 1765 aa28.13■■■□□ 2.09
PRKCH-219ENST00000555906 PEAK1Q9H792 1746 aa28.12■■■□□ 2.09
PRKCH-219ENST00000555906 PARD3Q8TEW0 1356 aa28.11■■■□□ 2.09
PRKCH-219ENST00000555906 PDE3BQ13370 1112 aa28.11■■■□□ 2.09
PRKCH-219ENST00000555906 KTN1Q86UP2 1357 aaKnown RBP28.11■■■□□ 2.09
PRKCH-219ENST00000555906 CARD11Q9BXL7 1154 aa28.1■■■□□ 2.09
PRKCH-219ENST00000555906 NUP188Q5SRE5 1749 aa28.09■■■□□ 2.09
PRKCH-219ENST00000555906 ZBTB7CA1YPR0 619 aa28.09■■■□□ 2.09
PRKCH-219ENST00000555906 TRIM37O94972 964 aa28.09■■■□□ 2.09
PRKCH-219ENST00000555906 KCNH5Q8NCM2 988 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms