RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 PLEKHG3A1L390 1219 aa18.34■□□□□ 0.53
HNRNPC-221ENST00000555883 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
HNRNPC-221ENST00000555883 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
HNRNPC-221ENST00000555883 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
HNRNPC-221ENST00000555883 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
HNRNPC-221ENST00000555883 BRD4O60885 1362 aaPredicted RBP18.3■□□□□ 0.52
HNRNPC-221ENST00000555883 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
HNRNPC-221ENST00000555883 ACEP12821 1306 aa18.29■□□□□ 0.52
HNRNPC-221ENST00000555883 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
HNRNPC-221ENST00000555883 BTG4Q9NY30 223 aa18.29■□□□□ 0.52
HNRNPC-221ENST00000555883 SEPT12Q8IYM1 358 aa18.28■□□□□ 0.52
HNRNPC-221ENST00000555883 BLMP54132 1417 aaPredicted RBP18.28■□□□□ 0.52
HNRNPC-221ENST00000555883 TRPM1Q7Z4N2 1603 aa18.27■□□□□ 0.52
HNRNPC-221ENST00000555883 PHRF1Q9P1Y6 1649 aaKnown RBP18.27■□□□□ 0.51
HNRNPC-221ENST00000555883 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
HNRNPC-221ENST00000555883 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
HNRNPC-221ENST00000555883 CCDC9Q9Y3X0 531 aaKnown RBP18.26■□□□□ 0.51
HNRNPC-221ENST00000555883 PPIP5K1Q6PFW1 1433 aa18.25■□□□□ 0.51
HNRNPC-221ENST00000555883 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
HNRNPC-221ENST00000555883 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
HNRNPC-221ENST00000555883 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
HNRNPC-221ENST00000555883 KIAA0232Q92628 1395 aa18.24■□□□□ 0.51
HNRNPC-221ENST00000555883 USP19O94966 1318 aa18.23■□□□□ 0.51
HNRNPC-221ENST00000555883 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
HNRNPC-221ENST00000555883 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
HNRNPC-221ENST00000555883 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
HNRNPC-221ENST00000555883 CPDO75976 1380 aa18.23■□□□□ 0.51
HNRNPC-221ENST00000555883 KRT27Q7Z3Y8 459 aa18.23■□□□□ 0.51
HNRNPC-221ENST00000555883 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
HNRNPC-221ENST00000555883 ROCK2O75116 1388 aaKnown RBP18.22■□□□□ 0.51
HNRNPC-221ENST00000555883 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
HNRNPC-221ENST00000555883 NRKQ7Z2Y5 1582 aa18.21■□□□□ 0.51
HNRNPC-221ENST00000555883 ABTB2Q8N961 1025 aa18.21■□□□□ 0.51
HNRNPC-221ENST00000555883 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
HNRNPC-221ENST00000555883 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
HNRNPC-221ENST00000555883 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
HNRNPC-221ENST00000555883 USP6P35125 1406 aa18.2■□□□□ 0.5
HNRNPC-221ENST00000555883 SBNO2Q9Y2G9 1366 aa18.19■□□□□ 0.5
HNRNPC-221ENST00000555883 NEUROD1Q13562 356 aa18.19■□□□□ 0.5
HNRNPC-221ENST00000555883 NLRP13Q86W25 1043 aa18.19■□□□□ 0.5
HNRNPC-221ENST00000555883 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
HNRNPC-221ENST00000555883 SPATA31A1Q5TZJ5 1347 aa18.19■□□□□ 0.5
HNRNPC-221ENST00000555883 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
HNRNPC-221ENST00000555883 SSH2Q76I76 1423 aa18.17■□□□□ 0.5
HNRNPC-221ENST00000555883 SF3B2Q13435 895 aaKnown RBP18.17■□□□□ 0.5
HNRNPC-221ENST00000555883 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
HNRNPC-221ENST00000555883 LMO7Q8WWI1 1683 aa18.17■□□□□ 0.5
HNRNPC-221ENST00000555883 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
HNRNPC-221ENST00000555883 NUTM2GQ5VZR2 741 aa18.16■□□□□ 0.5
HNRNPC-221ENST00000555883 A0A0G2JS52 829 aa18.15■□□□□ 0.5
HNRNPC-221ENST00000555883 GCP02774 474 aa18.15■□□□□ 0.5
HNRNPC-221ENST00000555883 MYT1Q01538 1121 aa18.15■□□□□ 0.5
HNRNPC-221ENST00000555883 CHRNA2Q15822 529 aa18.15■□□□□ 0.5
HNRNPC-221ENST00000555883 SLIT3O75094 1523 aa18.14■□□□□ 0.49
HNRNPC-221ENST00000555883 BARGINQ6ZT62 677 aa18.14■□□□□ 0.49
HNRNPC-221ENST00000555883 ZNF692Q9BU19 519 aaPredicted RBP18.14■□□□□ 0.49
HNRNPC-221ENST00000555883 CAMTA1Q9Y6Y1 1673 aa18.14■□□□□ 0.49
HNRNPC-221ENST00000555883 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
HNRNPC-221ENST00000555883 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
HNRNPC-221ENST00000555883 DISP2A7MBM2 1401 aa18.11■□□□□ 0.49
HNRNPC-221ENST00000555883 CPSF1Q10570 1443 aaKnown RBP18.11■□□□□ 0.49
HNRNPC-221ENST00000555883 COL5A2P05997 1499 aaPredicted RBP18.1■□□□□ 0.49
HNRNPC-221ENST00000555883 AATKQ6ZMQ8 1374 aa18.1■□□□□ 0.49
HNRNPC-221ENST00000555883 TONSLQ96HA7 1378 aa18.1■□□□□ 0.49
HNRNPC-221ENST00000555883 TTC21AQ8NDW8 1320 aa18.1■□□□□ 0.49
HNRNPC-221ENST00000555883 BAG6P46379 1132 aa18.1■□□□□ 0.49
HNRNPC-221ENST00000555883 EVA1CP58658 441 aa18.1■□□□□ 0.49
HNRNPC-221ENST00000555883 NLRP6P59044 892 aa18.1■□□□□ 0.49
HNRNPC-221ENST00000555883 DEFB132Q7Z7B7 95 aa18.1■□□□□ 0.49
HNRNPC-221ENST00000555883 PIK3C2AO00443 1686 aa18.09■□□□□ 0.49
HNRNPC-221ENST00000555883 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
HNRNPC-221ENST00000555883 TCP11L2Q8N4U5 519 aa18.08■□□□□ 0.48
HNRNPC-221ENST00000555883 CARD11Q9BXL7 1154 aa18.08■□□□□ 0.48
HNRNPC-221ENST00000555883 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
HNRNPC-221ENST00000555883 TTC21BQ7Z4L5 1316 aa18.07■□□□□ 0.48
HNRNPC-221ENST00000555883 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
HNRNPC-221ENST00000555883 FAM196AQ6ZSG2 479 aa18.07■□□□□ 0.48
HNRNPC-221ENST00000555883 CRB1P82279 1406 aa18.06■□□□□ 0.48
HNRNPC-221ENST00000555883 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
HNRNPC-221ENST00000555883 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
HNRNPC-221ENST00000555883 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
HNRNPC-221ENST00000555883 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
HNRNPC-221ENST00000555883 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
HNRNPC-221ENST00000555883 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
HNRNPC-221ENST00000555883 ABCC6O95255 1503 aa18.03■□□□□ 0.48
HNRNPC-221ENST00000555883 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
HNRNPC-221ENST00000555883 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
HNRNPC-221ENST00000555883 PARP4Q9UKK3 1724 aaKnown RBP18.03■□□□□ 0.48
HNRNPC-221ENST00000555883 PARD3Q8TEW0 1356 aa18.03■□□□□ 0.48
HNRNPC-221ENST00000555883 COL18A1P39060 1754 aa18.02■□□□□ 0.48
HNRNPC-221ENST00000555883 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
HNRNPC-221ENST00000555883 PDE3BQ13370 1112 aa18.02■□□□□ 0.48
HNRNPC-221ENST00000555883 FAM182BQ5T319 152 aa18.02■□□□□ 0.48
HNRNPC-221ENST00000555883 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
HNRNPC-221ENST00000555883 USP31Q70CQ4 1352 aa18.02■□□□□ 0.47
HNRNPC-221ENST00000555883 CD163L1Q9NR16 1453 aa18.01■□□□□ 0.47
HNRNPC-221ENST00000555883 USP54Q70EL1 1684 aa18.01■□□□□ 0.47
HNRNPC-221ENST00000555883 NFAT5O94916 1531 aa18.01■□□□□ 0.47
HNRNPC-221ENST00000555883 WDR17Q8IZU2 1322 aa17.99■□□□□ 0.47
HNRNPC-221ENST00000555883 NINLQ9Y2I6 1382 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms