RNA–Protein interactions for RNA: ENST00000555430.1

EFCAB11-206, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-206ENST00000555430 RNFT1Q5M7Z0 435 aa7.21□□□□□ -1.26
EFCAB11-206ENST00000555430 CCDC24Q8N4L8 307 aa7.21□□□□□ -1.26
EFCAB11-206ENST00000555430 KDM2AQ9Y2K7 1162 aa7.21□□□□□ -1.26
EFCAB11-206ENST00000555430 BAG6P46379 1132 aa7.19□□□□□ -1.26
EFCAB11-206ENST00000555430 Q3C1V9 767 aa7.19□□□□□ -1.26
EFCAB11-206ENST00000555430 RDH13Q8NBN7 331 aa7.19□□□□□ -1.26
EFCAB11-206ENST00000555430 NANOS1Q8WY41 292 aaKnown RBP7.19□□□□□ -1.26
EFCAB11-206ENST00000555430 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
EFCAB11-206ENST00000555430 TIMP2P16035 220 aa7.18□□□□□ -1.26
EFCAB11-206ENST00000555430 ADH1CP00326 375 aa7.17□□□□□ -1.26
EFCAB11-206ENST00000555430 MAP3K10Q02779 954 aa7.17□□□□□ -1.26
EFCAB11-206ENST00000555430 KRTAP19-1Q8IUB9 90 aa7.17□□□□□ -1.26
EFCAB11-206ENST00000555430 WDR4P57081 412 aaKnown RBP7.16□□□□□ -1.26
EFCAB11-206ENST00000555430 NNTQ13423 1086 aa7.16□□□□□ -1.26
EFCAB11-206ENST00000555430 DAXXQ9UER7 740 aaPredicted RBP7.16□□□□□ -1.26
EFCAB11-206ENST00000555430 FURINP09958 794 aa7.15□□□□□ -1.26
EFCAB11-206ENST00000555430 GRIPAP1Q4V328 841 aa7.15□□□□□ -1.26
EFCAB11-206ENST00000555430 GPIHBP1Q8IV16 184 aa7.15□□□□□ -1.26
EFCAB11-206ENST00000555430 PLEKHG3A1L390 1219 aa7.14□□□□□ -1.27
EFCAB11-206ENST00000555430 GCGRP47871 477 aa7.14□□□□□ -1.27
EFCAB11-206ENST00000555430 C6orf118Q5T5N4 469 aa7.14□□□□□ -1.27
EFCAB11-206ENST00000555430 USB1Q9BQ65 265 aaKnown RBP7.14□□□□□ -1.27
EFCAB11-206ENST00000555430 VSIG10Q8N0Z9 540 aa7.13□□□□□ -1.27
EFCAB11-206ENST00000555430 PHOX2BQ99453 314 aa7.13□□□□□ -1.27
EFCAB11-206ENST00000555430 ENAMQ9NRM1 1142 aa7.13□□□□□ -1.27
EFCAB11-206ENST00000555430 DDX11L8A8MPP1 907 aa7.12□□□□□ -1.27
EFCAB11-206ENST00000555430 LYPD4Q6UWN0 246 aa7.12□□□□□ -1.27
EFCAB11-206ENST00000555430 BEND7Q8N7W2 519 aaPredicted RBP7.12□□□□□ -1.27
EFCAB11-206ENST00000555430 NLRP7Q8WX94 980 aa7.12□□□□□ -1.27
EFCAB11-206ENST00000555430 GOLGA2P5Q9HBQ8 144 aa7.12□□□□□ -1.27
EFCAB11-206ENST00000555430 KLF16Q9BXK1 252 aaPredicted RBP7.11□□□□□ -1.27
EFCAB11-206ENST00000555430 DNMT3LQ9UJW3 386 aa7.11□□□□□ -1.27
EFCAB11-206ENST00000555430 TLL2Q9Y6L7 1015 aa7.11□□□□□ -1.27
EFCAB11-206ENST00000555430 CNTNAP5Q8WYK1 1306 aa7.1□□□□□ -1.27
EFCAB11-206ENST00000555430 PODNQ7Z5L7 613 aa7.1□□□□□ -1.27
EFCAB11-206ENST00000555430 SULF1Q8IWU6 871 aa7.1□□□□□ -1.27
EFCAB11-206ENST00000555430 MPNDQ8N594 471 aa7.1□□□□□ -1.27
EFCAB11-206ENST00000555430 SOS2Q07890 1332 aaPredicted RBP7.09□□□□□ -1.27
EFCAB11-206ENST00000555430 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
EFCAB11-206ENST00000555430 ADAMTS2O95450 1211 aa7.09□□□□□ -1.27
EFCAB11-206ENST00000555430 UPP2O95045 317 aa7.08□□□□□ -1.28
EFCAB11-206ENST00000555430 BMP2P12643 396 aa7.08□□□□□ -1.28
EFCAB11-206ENST00000555430 SH3BP2P78314 561 aa7.08□□□□□ -1.28
EFCAB11-206ENST00000555430 MAP2K5Q13163 448 aa7.08□□□□□ -1.28
EFCAB11-206ENST00000555430 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.08□□□□□ -1.28
EFCAB11-206ENST00000555430 CELA2BP08218 269 aaPredicted RBP7.07□□□□□ -1.28
EFCAB11-206ENST00000555430 PTSQ03393 145 aa7.07□□□□□ -1.28
EFCAB11-206ENST00000555430 LCE1DQ5T752 114 aa7.07□□□□□ -1.28
EFCAB11-206ENST00000555430 IRF6O14896 467 aa7.05□□□□□ -1.28
EFCAB11-206ENST00000555430 SRSF11Q05519 484 aaKnown RBP7.05□□□□□ -1.28
EFCAB11-206ENST00000555430 ZIC2O95409 532 aaPredicted RBP7.04□□□□□ -1.28
EFCAB11-206ENST00000555430 PTCRAQ6ISU1 281 aaPredicted RBP7.04□□□□□ -1.28
EFCAB11-206ENST00000555430 SV2AQ7L0J3 742 aa7.04□□□□□ -1.28
EFCAB11-206ENST00000555430 LINC00528Q8N1L1 170 aa7.04□□□□□ -1.28
EFCAB11-206ENST00000555430 CCDC155Q8N6L0 562 aa7.04□□□□□ -1.28
EFCAB11-206ENST00000555430 MINK1Q8N4C8 1332 aaPredicted RBP7.03□□□□□ -1.28
EFCAB11-206ENST00000555430 CD46P15529 392 aa7.03□□□□□ -1.28
EFCAB11-206ENST00000555430 VWA5B2Q8N398 1253 aa7.03□□□□□ -1.28
EFCAB11-206ENST00000555430 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
EFCAB11-206ENST00000555430 JUNDP17535 347 aa7.02□□□□□ -1.29
EFCAB11-206ENST00000555430 VARSP26640 1264 aaKnown RBP7.02□□□□□ -1.29
EFCAB11-206ENST00000555430 ZMYM1Q5SVZ6 1142 aa7.02□□□□□ -1.29
EFCAB11-206ENST00000555430 CDC14CA4D256 554 aa7.01□□□□□ -1.29
EFCAB11-206ENST00000555430 MDM2Q00987 491 aaPredicted RBP7.01□□□□□ -1.29
EFCAB11-206ENST00000555430 ITPKCQ96DU7 683 aa7.01□□□□□ -1.29
EFCAB11-206ENST00000555430 NUDT12Q9BQG2 462 aa7.01□□□□□ -1.29
EFCAB11-206ENST00000555430 ITGA6P23229 1130 aa7□□□□□ -1.29
EFCAB11-206ENST00000555430 MEIOBQ8N635 442 aa7□□□□□ -1.29
EFCAB11-206ENST00000555430 CCDC102AQ96A19 550 aa7□□□□□ -1.29
EFCAB11-206ENST00000555430 KRBA1A5PL33 1030 aa6.99□□□□□ -1.29
EFCAB11-206ENST00000555430 KDM4AO75164 1064 aa6.99□□□□□ -1.29
EFCAB11-206ENST00000555430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.99□□□□□ -1.29
EFCAB11-206ENST00000555430 TTLL8A6PVC2 850 aa6.98□□□□□ -1.29
EFCAB11-206ENST00000555430 ITGB7P26010 798 aa6.98□□□□□ -1.29
EFCAB11-206ENST00000555430 SH3RF1Q7Z6J0 888 aa6.98□□□□□ -1.29
EFCAB11-206ENST00000555430 ALYREFQ86V81 257 aaKnown RBP6.98□□□□□ -1.29
EFCAB11-206ENST00000555430 NEDD1Q8NHV4 660 aa6.98□□□□□ -1.29
EFCAB11-206ENST00000555430 USP46P62068 366 aa6.97□□□□□ -1.29
EFCAB11-206ENST00000555430 GPCPD1Q9NPB8 672 aa6.97□□□□□ -1.29
EFCAB11-206ENST00000555430 SLC35F4A4IF30 521 aa6.96□□□□□ -1.3
EFCAB11-206ENST00000555430 CLCN1P35523 988 aa6.96□□□□□ -1.3
EFCAB11-206ENST00000555430 HOXA2O43364 376 aa6.95□□□□□ -1.3
EFCAB11-206ENST00000555430 TSEN34Q9BSV6 310 aaKnown RBP6.95□□□□□ -1.3
EFCAB11-206ENST00000555430 FAM217BQ9NTX9 383 aaPredicted RBP6.95□□□□□ -1.3
EFCAB11-206ENST00000555430 SCO2A0A1W2PP80 73 aa6.94□□□□□ -1.3
EFCAB11-206ENST00000555430 SPTLC1O15269 473 aa6.94□□□□□ -1.3
EFCAB11-206ENST00000555430 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
EFCAB11-206ENST00000555430 HLA-CQ95604 372 aa6.94□□□□□ -1.3
EFCAB11-206ENST00000555430 NR5A1Q13285 461 aa6.93□□□□□ -1.3
EFCAB11-206ENST00000555430 ZNF511Q8NB15 262 aa6.93□□□□□ -1.3
EFCAB11-206ENST00000555430 FAM174AQ8TBP5 190 aa6.93□□□□□ -1.3
EFCAB11-206ENST00000555430 CDK15Q96Q40 435 aa6.93□□□□□ -1.3
EFCAB11-206ENST00000555430 FIGNL2A6NMB9 653 aa6.92□□□□□ -1.3
EFCAB11-206ENST00000555430 COBLO75128 1261 aa6.92□□□□□ -1.3
EFCAB11-206ENST00000555430 BCRP11274 1271 aa6.92□□□□□ -1.3
EFCAB11-206ENST00000555430 KRI1Q8N9T8 703 aaKnown RBP6.92□□□□□ -1.3
EFCAB11-206ENST00000555430 BAP1Q92560 729 aa6.92□□□□□ -1.3
EFCAB11-206ENST00000555430 KRTAP4-9Q9BYQ8 210 aa6.92□□□□□ -1.3
EFCAB11-206ENST00000555430 UNC93B1Q9H1C4 597 aa6.92□□□□□ -1.3
EFCAB11-206ENST00000555430 SEMA6BQ9H3T3 888 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms