RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 GGNBP2Q9H3C7 697 aa30.92■■■□□ 2.54
STRN3-207ENST00000555358 ATP7BP35670 1465 aa30.92■■■□□ 2.54
STRN3-207ENST00000555358 KDM2BQ8NHM5 1336 aa30.92■■■□□ 2.54
STRN3-207ENST00000555358 SKAP1Q86WV1 359 aa30.92■■■□□ 2.54
STRN3-207ENST00000555358 PRR36Q9H6K5 1346 aa30.91■■■□□ 2.54
STRN3-207ENST00000555358 XRN1Q8IZH2 1706 aaKnown RBP30.91■■■□□ 2.54
STRN3-207ENST00000555358 FYB1O15117 783 aa30.9■■■□□ 2.54
STRN3-207ENST00000555358 PTCH1Q13635 1447 aa30.9■■■□□ 2.54
STRN3-207ENST00000555358 CCDC61Q9Y6R9 512 aa30.88■■■□□ 2.53
STRN3-207ENST00000555358 ANKRD26Q9UPS8 1709 aa30.87■■■□□ 2.53
STRN3-207ENST00000555358 NUTM2FA1L443 756 aa30.86■■■□□ 2.53
STRN3-207ENST00000555358 KIF20BQ96Q89 1820 aa30.86■■■□□ 2.53
STRN3-207ENST00000555358 POLR3AO14802 1390 aaPredicted RBP30.86■■■□□ 2.53
STRN3-207ENST00000555358 KCNA6P17658 529 aa30.86■■■□□ 2.53
STRN3-207ENST00000555358 CPSF1Q10570 1443 aaKnown RBP30.86■■■□□ 2.53
STRN3-207ENST00000555358 GOLGA2Q08379 1002 aa30.85■■■□□ 2.53
STRN3-207ENST00000555358 MTHFSP49914 203 aa30.85■■■□□ 2.53
STRN3-207ENST00000555358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.85■■■□□ 2.534e-7■■□□□ 11.5
STRN3-207ENST00000555358 CDC42BPGQ6DT37 1551 aa30.83■■■□□ 2.53
STRN3-207ENST00000555358 PIK3R4Q99570 1358 aa30.82■■■□□ 2.52
STRN3-207ENST00000555358 SHPRHQ149N8 1683 aa30.81■■■□□ 2.52
STRN3-207ENST00000555358 SLFN5Q08AF3 891 aa30.81■■■□□ 2.52
STRN3-207ENST00000555358 CENPQQ7L2Z9 268 aaPredicted RBP30.81■■■□□ 2.52
STRN3-207ENST00000555358 CHD2O14647 1828 aaKnown RBP30.81■■■□□ 2.52
STRN3-207ENST00000555358 TRMT2AQ8IZ69 625 aaKnown RBP30.79■■■□□ 2.52
STRN3-207ENST00000555358 AKAP12Q02952 1782 aa30.79■■■□□ 2.52
STRN3-207ENST00000555358 ITSN1Q15811 1721 aa30.79■■■□□ 2.52
STRN3-207ENST00000555358 TOPAZ1Q8N9V7 1692 aa30.79■■■□□ 2.52
STRN3-207ENST00000555358 MON2Q7Z3U7 1717 aa30.78■■■□□ 2.52
STRN3-207ENST00000555358 CCDC146Q8IYE0 955 aa30.77■■■□□ 2.52
STRN3-207ENST00000555358 LAS1LQ9Y4W2 734 aaKnown RBP30.77■■■□□ 2.52
STRN3-207ENST00000555358 EDC4Q6P2E9 1401 aaKnown RBP30.76■■■□□ 2.52
STRN3-207ENST00000555358 NPHP4O75161 1426 aaPredicted RBP30.75■■■□□ 2.51
STRN3-207ENST00000555358 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.74■■■□□ 2.51
STRN3-207ENST00000555358 RGPD8O14715 1765 aaPredicted RBP30.74■■■□□ 2.51
STRN3-207ENST00000555358 DDRGK1Q96HY6 314 aa30.74■■■□□ 2.51
STRN3-207ENST00000555358 USP35Q9P2H5 1018 aa30.73■■■□□ 2.51
STRN3-207ENST00000555358 NKTRP30414 1462 aaKnown RBP30.73■■■□□ 2.51
STRN3-207ENST00000555358 NME9Q86XW9 330 aa30.72■■■□□ 2.51
STRN3-207ENST00000555358 NEFMP07197 916 aa30.7■■■□□ 2.51
STRN3-207ENST00000555358 CFAP53Q96M91 514 aa30.7■■■□□ 2.51
STRN3-207ENST00000555358 SPINK5Q9NQ38 1064 aaPredicted RBP30.7■■■□□ 2.51
STRN3-207ENST00000555358 ZRANB1Q9UGI0 708 aa30.7■■■□□ 2.51
STRN3-207ENST00000555358 ACEP12821 1306 aa30.7■■■□□ 2.51
STRN3-207ENST00000555358 FBLN1P23142 703 aa30.7■■■□□ 2.5
STRN3-207ENST00000555358 RBM33Q96EV2 1170 aaKnown RBP30.69■■■□□ 2.5
STRN3-207ENST00000555358 PLEKHG3A1L390 1219 aa30.69■■■□□ 2.5
STRN3-207ENST00000555358 PPM1GO15355 546 aaPredicted RBP30.69■■■□□ 2.5
STRN3-207ENST00000555358 ZNF692Q9BU19 519 aaPredicted RBP30.68■■■□□ 2.5
STRN3-207ENST00000555358 APAF1O14727 1248 aa30.67■■■□□ 2.5
STRN3-207ENST00000555358 NALCNQ8IZF0 1738 aa30.65■■■□□ 2.5
STRN3-207ENST00000555358 PMFBP1Q8TBY8 1022 aa30.65■■■□□ 2.5
STRN3-207ENST00000555358 C8orf34Q49A92 452 aa30.65■■■□□ 2.5
STRN3-207ENST00000555358 NRKQ7Z2Y5 1582 aa30.64■■■□□ 2.5
STRN3-207ENST00000555358 FAM161AQ3B820 660 aa30.63■■■□□ 2.49
STRN3-207ENST00000555358 MAP2P11137 1827 aaKnown RBP30.63■■■□□ 2.49
STRN3-207ENST00000555358 COL3A1P02461 1466 aaPredicted RBP30.63■■■□□ 2.49
STRN3-207ENST00000555358 FMN2Q9NZ56 1722 aa30.62■■■□□ 2.49
STRN3-207ENST00000555358 USP6P35125 1406 aa30.61■■■□□ 2.49
STRN3-207ENST00000555358 E9PSI1 815 aa30.61■■■□□ 2.49
STRN3-207ENST00000555358 TTC21BQ7Z4L5 1316 aa30.6■■■□□ 2.49
STRN3-207ENST00000555358 POLKQ9UBT6 870 aa30.59■■■□□ 2.49
STRN3-207ENST00000555358 BCAR3O75815 825 aa30.58■■■□□ 2.49
STRN3-207ENST00000555358 NGEFQ8N5V2 710 aa30.58■■■□□ 2.49
STRN3-207ENST00000555358 COG3Q96JB2 828 aa30.58■■■□□ 2.49
STRN3-207ENST00000555358 DMRT2Q9Y5R5 561 aa30.58■■■□□ 2.49
STRN3-207ENST00000555358 KDM4FA0A1W2PPD8 638 aa30.56■■■□□ 2.48
STRN3-207ENST00000555358 U2AF1L5P0DN76 240 aaPredicted RBP30.56■■■□□ 2.48
STRN3-207ENST00000555358 U2AF1Q01081 240 aaKnown RBP eCLIP30.56■■■□□ 2.482e-7■■■■□ 25.5
STRN3-207ENST00000555358 PNPLA6Q8IY17 1366 aa30.55■■■□□ 2.48
STRN3-207ENST00000555358 ANKARQ7Z5J8 1434 aa30.55■■■□□ 2.48
STRN3-207ENST00000555358 NGDNQ8NEJ9 315 aaKnown RBP30.54■■■□□ 2.48
STRN3-207ENST00000555358 SSH2Q76I76 1423 aa30.54■■■□□ 2.48
STRN3-207ENST00000555358 EMILIN1Q9Y6C2 1016 aa30.54■■■□□ 2.48
STRN3-207ENST00000555358 HSPA2P54652 639 aa30.53■■■□□ 2.48
STRN3-207ENST00000555358 RUNDC1Q96C34 613 aa30.53■■■□□ 2.48
STRN3-207ENST00000555358 U2SURPO15042 1029 aaKnown RBP30.53■■■□□ 2.48
STRN3-207ENST00000555358 NWD1Q149M9 1564 aa30.51■■■□□ 2.48
STRN3-207ENST00000555358 ADGRL3Q9HAR2 1447 aa30.51■■■□□ 2.47
STRN3-207ENST00000555358 DIAPH1O60610 1272 aaKnown RBP30.5■■■□□ 2.47
STRN3-207ENST00000555358 RGS3P49796 1198 aa30.5■■■□□ 2.47
STRN3-207ENST00000555358 RRS1Q15050 365 aaKnown RBP30.5■■■□□ 2.47
STRN3-207ENST00000555358 IQSEC2Q5JU85 1478 aa30.49■■■□□ 2.47
STRN3-207ENST00000555358 SLC4A3P48751 1232 aa30.49■■■□□ 2.47
STRN3-207ENST00000555358 VIRMAQ69YN4 1812 aaKnown RBP30.49■■■□□ 2.47
STRN3-207ENST00000555358 AATKQ6ZMQ8 1374 aa30.49■■■□□ 2.47
STRN3-207ENST00000555358 TCP11L2Q8N4U5 519 aa30.49■■■□□ 2.47
STRN3-207ENST00000555358 RRP7AQ9Y3A4 280 aaKnown RBP30.49■■■□□ 2.47
STRN3-207ENST00000555358 OVOS2A0A0J9YW53 1432 aa30.48■■■□□ 2.47
STRN3-207ENST00000555358 OVOS2Q6IE36 1432 aa30.48■■■□□ 2.47
STRN3-207ENST00000555358 NEUROD2Q15784 382 aa30.47■■■□□ 2.47
STRN3-207ENST00000555358 PDE3AQ14432 1141 aa30.46■■■□□ 2.47
STRN3-207ENST00000555358 WWC1Q8IX03 1113 aa30.46■■■□□ 2.47
STRN3-207ENST00000555358 C14orf37Q86TY3 774 aa30.46■■■□□ 2.47
STRN3-207ENST00000555358 IGHDP01880 384 aa30.45■■■□□ 2.46
STRN3-207ENST00000555358 NFKBIBQ15653 356 aa30.43■■■□□ 2.46
STRN3-207ENST00000555358 TTC21AQ8NDW8 1320 aa30.43■■■□□ 2.46
STRN3-207ENST00000555358 PROSER2Q86WR7 435 aaPredicted RBP30.42■■■□□ 2.46
STRN3-207ENST00000555358 CDK12Q9NYV4 1490 aaPredicted RBP30.42■■■□□ 2.46
STRN3-207ENST00000555358 PLEKHF1Q96S99 279 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms