RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.22
PPP4R3A-206ENST00000554943 USP19O94966 1318 aa16.45■□□□□ 0.22
PPP4R3A-206ENST00000554943 CABP2Q9NPB3 220 aa16.45■□□□□ 0.22
PPP4R3A-206ENST00000554943 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
PPP4R3A-206ENST00000554943 ARHGAP23Q9P227 1491 aa16.45■□□□□ 0.22
PPP4R3A-206ENST00000554943 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
PPP4R3A-206ENST00000554943 IGHDP01880 384 aa16.44■□□□□ 0.22
PPP4R3A-206ENST00000554943 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
PPP4R3A-206ENST00000554943 DIP2AQ14689 1571 aa16.43■□□□□ 0.22
PPP4R3A-206ENST00000554943 LRRC37A3O60309 1634 aa16.43■□□□□ 0.22
PPP4R3A-206ENST00000554943 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
PPP4R3A-206ENST00000554943 SSH2Q76I76 1423 aa16.43■□□□□ 0.22
PPP4R3A-206ENST00000554943 METP08581 1390 aa16.42■□□□□ 0.22
PPP4R3A-206ENST00000554943 PIK3R4Q99570 1358 aa16.41■□□□□ 0.22
PPP4R3A-206ENST00000554943 PRAM1Q96QH2 718 aa16.41■□□□□ 0.22
PPP4R3A-206ENST00000554943 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
PPP4R3A-206ENST00000554943 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
PPP4R3A-206ENST00000554943 NBR1Q14596 966 aa16.39■□□□□ 0.21
PPP4R3A-206ENST00000554943 RLBP1P12271 317 aa16.38■□□□□ 0.21
PPP4R3A-206ENST00000554943 FAM161AQ3B820 660 aa16.38■□□□□ 0.21
PPP4R3A-206ENST00000554943 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
PPP4R3A-206ENST00000554943 TUBGCP6Q96RT7 1819 aa16.37■□□□□ 0.21
PPP4R3A-206ENST00000554943 CDK19Q9BWU1 502 aa16.37■□□□□ 0.21
PPP4R3A-206ENST00000554943 OVOS2A0A0J9YW53 1432 aa16.37■□□□□ 0.21
PPP4R3A-206ENST00000554943 OVOS2Q6IE36 1432 aa16.37■□□□□ 0.21
PPP4R3A-206ENST00000554943 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
PPP4R3A-206ENST00000554943 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
PPP4R3A-206ENST00000554943 CFAP53Q96M91 514 aa16.36■□□□□ 0.21
PPP4R3A-206ENST00000554943 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-206ENST00000554943 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
PPP4R3A-206ENST00000554943 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
PPP4R3A-206ENST00000554943 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
PPP4R3A-206ENST00000554943 FER1L4A9Z1Z3 1794 aa16.35■□□□□ 0.21
PPP4R3A-206ENST00000554943 PIK3C2AO00443 1686 aa16.35■□□□□ 0.21
PPP4R3A-206ENST00000554943 BCL11AQ9H165 835 aa16.35■□□□□ 0.21
PPP4R3A-206ENST00000554943 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
PPP4R3A-206ENST00000554943 PHRF1Q9P1Y6 1649 aaKnown RBP16.34■□□□□ 0.21
PPP4R3A-206ENST00000554943 TMEM2Q9UHN6 1383 aa16.34■□□□□ 0.21
PPP4R3A-206ENST00000554943 ZNF142P52746 1687 aaPredicted RBP16.34■□□□□ 0.21
PPP4R3A-206ENST00000554943 PLEKHG1Q9ULL1 1385 aa16.33■□□□□ 0.21
PPP4R3A-206ENST00000554943 PCDHB15Q9Y5E8 787 aa16.33■□□□□ 0.2
PPP4R3A-206ENST00000554943 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
PPP4R3A-206ENST00000554943 POLKQ9UBT6 870 aa16.32■□□□□ 0.2
PPP4R3A-206ENST00000554943 PTPRUQ92729 1446 aa16.32■□□□□ 0.2
PPP4R3A-206ENST00000554943 USP31Q70CQ4 1352 aa16.32■□□□□ 0.2
PPP4R3A-206ENST00000554943 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
PPP4R3A-206ENST00000554943 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
PPP4R3A-206ENST00000554943 FCHSD2O94868 740 aa16.31■□□□□ 0.2
PPP4R3A-206ENST00000554943 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
PPP4R3A-206ENST00000554943 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
PPP4R3A-206ENST00000554943 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-206ENST00000554943 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
PPP4R3A-206ENST00000554943 IL13P35225 146 aa16.3■□□□□ 0.2
PPP4R3A-206ENST00000554943 MVPQ14764 893 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 USP35Q9P2H5 1018 aa16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 MINK1Q8N4C8 1332 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 WASLO00401 505 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 CABP1Q9NZU7 370 aa16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
PPP4R3A-206ENST00000554943 NWD1Q149M9 1564 aa16.28■□□□□ 0.2
PPP4R3A-206ENST00000554943 TNRQ92752 1358 aa16.28■□□□□ 0.2
PPP4R3A-206ENST00000554943 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.28■□□□□ 0.2
PPP4R3A-206ENST00000554943 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
PPP4R3A-206ENST00000554943 PRR36Q9H6K5 1346 aa16.27■□□□□ 0.2
PPP4R3A-206ENST00000554943 CHD2O14647 1828 aaKnown RBP16.27■□□□□ 0.2
PPP4R3A-206ENST00000554943 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.19
PPP4R3A-206ENST00000554943 FAM208AQ9UK61 1670 aaKnown RBP16.26■□□□□ 0.19
PPP4R3A-206ENST00000554943 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
PPP4R3A-206ENST00000554943 ZNF428Q96B54 188 aa16.26■□□□□ 0.19
PPP4R3A-206ENST00000554943 COG6Q9Y2V7 657 aa16.26■□□□□ 0.19
PPP4R3A-206ENST00000554943 PMFBP1Q8TBY8 1022 aa16.26■□□□□ 0.19
PPP4R3A-206ENST00000554943 RGS12O14924 1447 aa16.25■□□□□ 0.19
PPP4R3A-206ENST00000554943 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
PPP4R3A-206ENST00000554943 HDGFL2Q7Z4V5 671 aaPredicted RBP16.25■□□□□ 0.19
PPP4R3A-206ENST00000554943 WAPLQ7Z5K2 1190 aa16.25■□□□□ 0.19
PPP4R3A-206ENST00000554943 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
PPP4R3A-206ENST00000554943 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
PPP4R3A-206ENST00000554943 STK26Q9P289 416 aa16.24■□□□□ 0.19
PPP4R3A-206ENST00000554943 DIAPH1O60610 1272 aaKnown RBP16.24■□□□□ 0.19
PPP4R3A-206ENST00000554943 TRIM27P14373 513 aa16.24■□□□□ 0.19
PPP4R3A-206ENST00000554943 USP6P35125 1406 aa16.23■□□□□ 0.19
PPP4R3A-206ENST00000554943 CAMTA1Q9Y6Y1 1673 aa16.23■□□□□ 0.19
PPP4R3A-206ENST00000554943 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
PPP4R3A-206ENST00000554943 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
PPP4R3A-206ENST00000554943 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
PPP4R3A-206ENST00000554943 SSH1Q8WYL5 1049 aa16.22■□□□□ 0.19
PPP4R3A-206ENST00000554943 PLEKHG3A1L390 1219 aa16.21■□□□□ 0.19
PPP4R3A-206ENST00000554943 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
PPP4R3A-206ENST00000554943 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
PPP4R3A-206ENST00000554943 SEC24BO95487 1268 aa16.21■□□□□ 0.19
PPP4R3A-206ENST00000554943 ZKSCAN2Q63HK3 967 aa16.21■□□□□ 0.19
PPP4R3A-206ENST00000554943 ARHGAP45Q92619 1136 aa16.21■□□□□ 0.19
PPP4R3A-206ENST00000554943 EXOSC9Q06265 439 aaKnown RBP16.21■□□□□ 0.18
PPP4R3A-206ENST00000554943 MED1Q15648 1581 aaPredicted RBP16.2■□□□□ 0.18
PPP4R3A-206ENST00000554943 TSR2Q969E8 191 aaKnown RBP16.2■□□□□ 0.18
PPP4R3A-206ENST00000554943 POGKQ9P215 609 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms