RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 PRR20EP86478 221 aa10.16□□□□□ -0.78
LINC01550-204ENST00000554822 PRR20CP86479 221 aa10.16□□□□□ -0.78
LINC01550-204ENST00000554822 PRR20DP86480 221 aa10.16□□□□□ -0.78
LINC01550-204ENST00000554822 PRR20BP86481 221 aa10.16□□□□□ -0.78
LINC01550-204ENST00000554822 PRR20AP86496 221 aa10.16□□□□□ -0.78
LINC01550-204ENST00000554822 NR6A1Q15406 480 aa10.16□□□□□ -0.78
LINC01550-204ENST00000554822 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
LINC01550-204ENST00000554822 Q6ZNB5 142 aa10.16□□□□□ -0.78
LINC01550-204ENST00000554822 HMX1Q9NP08 348 aaPredicted RBP10.16□□□□□ -0.78
LINC01550-204ENST00000554822 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
LINC01550-204ENST00000554822 WNT7AO00755 349 aa10.14□□□□□ -0.79
LINC01550-204ENST00000554822 EPS8L1Q8TE68 723 aa10.14□□□□□ -0.79
LINC01550-204ENST00000554822 MRGPRX2Q96LB1 330 aa10.14□□□□□ -0.79
LINC01550-204ENST00000554822 NRG2O14511 850 aaPredicted RBP10.13□□□□□ -0.79
LINC01550-204ENST00000554822 LAPTM4AQ15012 233 aa10.12□□□□□ -0.79
LINC01550-204ENST00000554822 ARMC2Q8NEN0 867 aa10.11□□□□□ -0.79
LINC01550-204ENST00000554822 FOXJ1Q92949 421 aa10.11□□□□□ -0.79
LINC01550-204ENST00000554822 TMEM132AQ24JP5 1023 aa10.1□□□□□ -0.79
LINC01550-204ENST00000554822 CYP4X1Q8N118 509 aa10.1□□□□□ -0.79
LINC01550-204ENST00000554822 BANK1Q8NDB2 785 aa10.1□□□□□ -0.79
LINC01550-204ENST00000554822 EHBP1Q8NDI1 1231 aa10.1□□□□□ -0.79
LINC01550-204ENST00000554822 SNRKQ9NRH2 765 aa10.1□□□□□ -0.79
LINC01550-204ENST00000554822 AGERQ15109 404 aa10.09□□□□□ -0.79
LINC01550-204ENST00000554822 TOR4AQ9NXH8 423 aa10.09□□□□□ -0.79
LINC01550-204ENST00000554822 FKBPLQ9UIM3 349 aa10.09□□□□□ -0.79
LINC01550-204ENST00000554822 TTC24A2A3L6 582 aaPredicted RBP10.08□□□□□ -0.8
LINC01550-204ENST00000554822 TRIM34Q9BYJ4 488 aa10.08□□□□□ -0.8
LINC01550-204ENST00000554822 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
LINC01550-204ENST00000554822 NBPF14Q5TI25 921 aa10.07□□□□□ -0.8
LINC01550-204ENST00000554822 SNIP1Q8TAD8 396 aaKnown RBP10.07□□□□□ -0.8
LINC01550-204ENST00000554822 FAM187AA6NFU0 413 aa10.06□□□□□ -0.8
LINC01550-204ENST00000554822 LCE2BO14633 110 aa10.06□□□□□ -0.8
LINC01550-204ENST00000554822 SIAH2O43255 324 aa10.06□□□□□ -0.8
LINC01550-204ENST00000554822 VARSP26640 1264 aaKnown RBP10.06□□□□□ -0.8
LINC01550-204ENST00000554822 MTMR14Q8NCE2 650 aa10.06□□□□□ -0.8
LINC01550-204ENST00000554822 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
LINC01550-204ENST00000554822 J3QL48 77 aa10.05□□□□□ -0.8
LINC01550-204ENST00000554822 BPHLQ86WA6 291 aaPredicted RBP10.05□□□□□ -0.8
LINC01550-204ENST00000554822 ALDH1A1P00352 501 aa10.04□□□□□ -0.8
LINC01550-204ENST00000554822 SH3BP5LQ7L8J4 393 aa10.04□□□□□ -0.8
LINC01550-204ENST00000554822 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
LINC01550-204ENST00000554822 SMPD1P17405 629 aa10.03□□□□□ -0.8
LINC01550-204ENST00000554822 PKDCCQ504Y2 493 aa10.03□□□□□ -0.8
LINC01550-204ENST00000554822 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
LINC01550-204ENST00000554822 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
LINC01550-204ENST00000554822 GPKOWQ92917 476 aaPredicted RBP eCLIP10.03□□□□□ -0.8
LINC01550-204ENST00000554822 DGAT1O75907 488 aa10.02□□□□□ -0.81
LINC01550-204ENST00000554822 FAM174AQ8TBP5 190 aa10.02□□□□□ -0.81
LINC01550-204ENST00000554822 CARD14Q9BXL6 1004 aa10.02□□□□□ -0.81
LINC01550-204ENST00000554822 TLL2Q9Y6L7 1015 aa10.02□□□□□ -0.81
LINC01550-204ENST00000554822 TRAF7Q6Q0C0 670 aa10.01□□□□□ -0.81
LINC01550-204ENST00000554822 PNMA1Q8ND90 353 aa10.01□□□□□ -0.81
LINC01550-204ENST00000554822 ZC3H4Q9UPT8 1303 aaKnown RBP10.01□□□□□ -0.81
LINC01550-204ENST00000554822 ARHGAP9Q9BRR9 750 aa10□□□□□ -0.81
LINC01550-204ENST00000554822 PTK2Q05397 1052 aa9.99□□□□□ -0.81
LINC01550-204ENST00000554822 ARID5BQ14865 1188 aa9.99□□□□□ -0.81
LINC01550-204ENST00000554822 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
LINC01550-204ENST00000554822 SOCS7O14512 581 aa9.98□□□□□ -0.81
LINC01550-204ENST00000554822 C1QTNF2Q9BXJ5 285 aa9.98□□□□□ -0.81
LINC01550-204ENST00000554822 WASF2Q9Y6W5 498 aa9.98□□□□□ -0.81
LINC01550-204ENST00000554822 MYT1Q01538 1121 aa9.97□□□□□ -0.81
LINC01550-204ENST00000554822 ERFEQ4G0M1 354 aa9.97□□□□□ -0.81
LINC01550-204ENST00000554822 ZBTB33Q86T24 672 aa9.97□□□□□ -0.81
LINC01550-204ENST00000554822 HPS1Q92902 700 aa9.97□□□□□ -0.81
LINC01550-204ENST00000554822 NDUFB9Q9Y6M9 179 aa9.97□□□□□ -0.81
LINC01550-204ENST00000554822 MPNDQ8N594 471 aa9.96□□□□□ -0.82
LINC01550-204ENST00000554822 GPSM3Q9Y4H4 160 aa9.96□□□□□ -0.82
LINC01550-204ENST00000554822 APBB1O00213 710 aa9.95□□□□□ -0.82
LINC01550-204ENST00000554822 GPR37L1O60883 481 aa9.95□□□□□ -0.82
LINC01550-204ENST00000554822 MCM6Q14566 821 aa9.95□□□□□ -0.82
LINC01550-204ENST00000554822 ADAM32Q8TC27 787 aa9.95□□□□□ -0.82
LINC01550-204ENST00000554822 CDK15Q96Q40 435 aa9.95□□□□□ -0.82
LINC01550-204ENST00000554822 TBC1D2BQ9UPU7 963 aa9.95□□□□□ -0.82
LINC01550-204ENST00000554822 AVPP01185 164 aa9.94□□□□□ -0.82
LINC01550-204ENST00000554822 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
LINC01550-204ENST00000554822 ST8SIA5O15466 376 aa9.93□□□□□ -0.82
LINC01550-204ENST00000554822 ADH1CP00326 375 aa9.93□□□□□ -0.82
LINC01550-204ENST00000554822 GRM5P41594 1212 aa9.93□□□□□ -0.82
LINC01550-204ENST00000554822 VASH1Q7L8A9 365 aaPredicted RBP9.93□□□□□ -0.82
LINC01550-204ENST00000554822 ZBBXA8MT70 800 aa9.92□□□□□ -0.82
LINC01550-204ENST00000554822 NNTQ13423 1086 aa9.92□□□□□ -0.82
LINC01550-204ENST00000554822 GDPD2Q9HCC8 539 aa9.92□□□□□ -0.82
LINC01550-204ENST00000554822 FBXO45P0C2W1 286 aa9.91□□□□□ -0.82
LINC01550-204ENST00000554822 PRM3Q9NNZ6 103 aa9.91□□□□□ -0.82
LINC01550-204ENST00000554822 AAASQ9NRG9 546 aa9.91□□□□□ -0.82
LINC01550-204ENST00000554822 SLC10A4Q96EP9 437 aa9.9□□□□□ -0.82
LINC01550-204ENST00000554822 MAP4K5Q9Y4K4 846 aa9.9□□□□□ -0.82
LINC01550-204ENST00000554822 AXIN1O15169 862 aa9.89□□□□□ -0.83
LINC01550-204ENST00000554822 NR3C2P08235 984 aa9.89□□□□□ -0.83
LINC01550-204ENST00000554822 FSHRP23945 695 aa9.89□□□□□ -0.83
LINC01550-204ENST00000554822 NR5A1Q13285 461 aa9.89□□□□□ -0.83
LINC01550-204ENST00000554822 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
LINC01550-204ENST00000554822 ABL2P42684 1182 aa9.88□□□□□ -0.83
LINC01550-204ENST00000554822 SMCPP49901 116 aaPredicted RBP9.88□□□□□ -0.83
LINC01550-204ENST00000554822 NR1H3Q13133 447 aa9.88□□□□□ -0.83
LINC01550-204ENST00000554822 CTC1Q2NKJ3 1217 aa9.88□□□□□ -0.83
LINC01550-204ENST00000554822 CRIPAKQ8N1N5 446 aa9.88□□□□□ -0.83
LINC01550-204ENST00000554822 KCTD15Q96SI1 283 aaPredicted RBP9.88□□□□□ -0.83
LINC01550-204ENST00000554822 DACH1Q9UI36 760 aa9.88□□□□□ -0.83
LINC01550-204ENST00000554822 FLIIQ13045 1269 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms