RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 NR6A1Q15406 480 aa9.27□□□□□ -0.93
PCNX1-208ENST00000554707 SPRYD7Q5W111 196 aa9.27□□□□□ -0.93
PCNX1-208ENST00000554707 HMX1Q9NP08 348 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-208ENST00000554707 ZNF598Q86UK7 904 aaKnown RBP9.26□□□□□ -0.93
PCNX1-208ENST00000554707 FKBPLQ9UIM3 349 aa9.26□□□□□ -0.93
PCNX1-208ENST00000554707 NBPF14Q5TI25 921 aa9.25□□□□□ -0.93
PCNX1-208ENST00000554707 PDXDC2PQ6P474 469 aa9.24□□□□□ -0.93
PCNX1-208ENST00000554707 NDUFB9Q9Y6M9 179 aa9.24□□□□□ -0.93
PCNX1-208ENST00000554707 EPS8L1Q8TE68 723 aa9.23□□□□□ -0.93
PCNX1-208ENST00000554707 BAP1Q92560 729 aa9.23□□□□□ -0.93
PCNX1-208ENST00000554707 GPSM3Q9Y4H4 160 aa9.23□□□□□ -0.93
PCNX1-208ENST00000554707 ZNF511Q8NB15 262 aa9.22□□□□□ -0.93
PCNX1-208ENST00000554707 SH3BP2P78314 561 aa9.21□□□□□ -0.94
PCNX1-208ENST00000554707 IRX2Q9BZI1 471 aaPredicted RBP9.21□□□□□ -0.94
PCNX1-208ENST00000554707 ZNF697Q5TEC3 545 aa9.2□□□□□ -0.94
PCNX1-208ENST00000554707 BPHLQ86WA6 291 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-208ENST00000554707 WNT7AO00755 349 aa9.19□□□□□ -0.94
PCNX1-208ENST00000554707 UBTFP17480 764 aaKnown RBP9.19□□□□□ -0.94
PCNX1-208ENST00000554707 SKOR1P84550 965 aa9.19□□□□□ -0.94
PCNX1-208ENST00000554707 PTK2Q05397 1052 aa9.19□□□□□ -0.94
PCNX1-208ENST00000554707 ERICH6Q7L0X2 663 aa9.19□□□□□ -0.94
PCNX1-208ENST00000554707 RAD21O60216 631 aa9.18□□□□□ -0.94
PCNX1-208ENST00000554707 VARSP26640 1264 aaKnown RBP9.18□□□□□ -0.94
PCNX1-208ENST00000554707 RC3H1Q5TC82 1133 aaKnown RBP9.18□□□□□ -0.94
PCNX1-208ENST00000554707 SH3BP5LQ7L8J4 393 aa9.18□□□□□ -0.94
PCNX1-208ENST00000554707 SH3RF1Q7Z6J0 888 aa9.18□□□□□ -0.94
PCNX1-208ENST00000554707 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
PCNX1-208ENST00000554707 COG6Q9Y2V7 657 aa9.17□□□□□ -0.94
PCNX1-208ENST00000554707 PRR20EP86478 221 aa9.16□□□□□ -0.94
PCNX1-208ENST00000554707 PRR20CP86479 221 aa9.16□□□□□ -0.94
PCNX1-208ENST00000554707 PRR20DP86480 221 aa9.16□□□□□ -0.94
PCNX1-208ENST00000554707 PRR20BP86481 221 aa9.16□□□□□ -0.94
PCNX1-208ENST00000554707 PRR20AP86496 221 aa9.16□□□□□ -0.94
PCNX1-208ENST00000554707 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
PCNX1-208ENST00000554707 MPNDQ8N594 471 aa9.16□□□□□ -0.94
PCNX1-208ENST00000554707 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
PCNX1-208ENST00000554707 A6NJR5 290 aa9.15□□□□□ -0.94
PCNX1-208ENST00000554707 GDF9O60383 454 aa9.15□□□□□ -0.94
PCNX1-208ENST00000554707 GPR37L1O60883 481 aa9.15□□□□□ -0.94
PCNX1-208ENST00000554707 ARHGAP9Q9BRR9 750 aa9.15□□□□□ -0.94
PCNX1-208ENST00000554707 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.94
PCNX1-208ENST00000554707 PKD2L1Q9P0L9 805 aa9.15□□□□□ -0.94
PCNX1-208ENST00000554707 ZBBXA8MT70 800 aa9.14□□□□□ -0.95
PCNX1-208ENST00000554707 AGERQ15109 404 aa9.14□□□□□ -0.95
PCNX1-208ENST00000554707 WASHC4Q2M389 1173 aa9.14□□□□□ -0.95
PCNX1-208ENST00000554707 EHBP1Q8NDI1 1231 aa9.14□□□□□ -0.95
PCNX1-208ENST00000554707 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
PCNX1-208ENST00000554707 FOXJ1Q92949 421 aa9.14□□□□□ -0.95
PCNX1-208ENST00000554707 SIAH2O43255 324 aa9.13□□□□□ -0.95
PCNX1-208ENST00000554707 MCCD1P59942 119 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-208ENST00000554707 NR1H3Q13133 447 aa9.13□□□□□ -0.95
PCNX1-208ENST00000554707 FAM174AQ8TBP5 190 aa9.13□□□□□ -0.95
PCNX1-208ENST00000554707 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
PCNX1-208ENST00000554707 ZNF330Q9Y3S2 320 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-208ENST00000554707 IRF5Q13568 498 aa9.12□□□□□ -0.95
PCNX1-208ENST00000554707 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
PCNX1-208ENST00000554707 ZBTB33Q86T24 672 aa9.12□□□□□ -0.95
PCNX1-208ENST00000554707 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
PCNX1-208ENST00000554707 MRGPRX2Q96LB1 330 aa9.12□□□□□ -0.95
PCNX1-208ENST00000554707 OCSTAMPQ9BR26 566 aa9.11□□□□□ -0.95
PCNX1-208ENST00000554707 CDV3Q9UKY7 258 aaKnown RBP9.11□□□□□ -0.95
PCNX1-208ENST00000554707 FBXO45P0C2W1 286 aa9.1□□□□□ -0.95
PCNX1-208ENST00000554707 ABL2P42684 1182 aa9.1□□□□□ -0.95
PCNX1-208ENST00000554707 FOXC1Q12948 553 aa9.1□□□□□ -0.95
PCNX1-208ENST00000554707 LAPTM4AQ15012 233 aa9.1□□□□□ -0.95
PCNX1-208ENST00000554707 TRIM67Q6ZTA4 783 aa9.1□□□□□ -0.95
PCNX1-208ENST00000554707 SNIP1Q8TAD8 396 aaKnown RBP9.1□□□□□ -0.95
PCNX1-208ENST00000554707 ADAM32Q8TC27 787 aa9.1□□□□□ -0.95
PCNX1-208ENST00000554707 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
PCNX1-208ENST00000554707 CDK15Q96Q40 435 aa9.1□□□□□ -0.95
PCNX1-208ENST00000554707 ERFEQ4G0M1 354 aa9.09□□□□□ -0.95
PCNX1-208ENST00000554707 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
PCNX1-208ENST00000554707 PDZRN3Q9UPQ7 1066 aa9.09□□□□□ -0.95
PCNX1-208ENST00000554707 MAP4K5Q9Y4K4 846 aa9.09□□□□□ -0.95
PCNX1-208ENST00000554707 MAGEB6P1A0A0J9YX57 407 aa9.08□□□□□ -0.96
PCNX1-208ENST00000554707 SOX11P35716 441 aa9.08□□□□□ -0.96
PCNX1-208ENST00000554707 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
PCNX1-208ENST00000554707 FNBP4Q8N3X1 1017 aaPredicted RBP9.08□□□□□ -0.96
PCNX1-208ENST00000554707 ZMYND15Q9H091 742 aa9.08□□□□□ -0.96
PCNX1-208ENST00000554707 EIF4G2P78344 907 aaKnown RBP eCLIP9.07□□□□□ -0.96
PCNX1-208ENST00000554707 CLUAP1Q96AJ1 413 aa9.07□□□□□ -0.96
PCNX1-208ENST00000554707 PROSER2Q86WR7 435 aaPredicted RBP9.06□□□□□ -0.96
PCNX1-208ENST00000554707 CARD14Q9BXL6 1004 aa9.06□□□□□ -0.96
PCNX1-208ENST00000554707 TTC24A2A3L6 582 aaPredicted RBP9.05□□□□□ -0.96
PCNX1-208ENST00000554707 TNFRSF10AO00220 468 aa9.05□□□□□ -0.96
PCNX1-208ENST00000554707 NRG2O14511 850 aaPredicted RBP9.05□□□□□ -0.96
PCNX1-208ENST00000554707 DZIP3Q86Y13 1208 aaKnown RBP9.05□□□□□ -0.96
PCNX1-208ENST00000554707 CCDC125Q86Z20 511 aa9.05□□□□□ -0.96
PCNX1-208ENST00000554707 SLC10A4Q96EP9 437 aa9.05□□□□□ -0.96
PCNX1-208ENST00000554707 GFRA3O60609 400 aa9.04□□□□□ -0.96
PCNX1-208ENST00000554707 NR5A1Q13285 461 aa9.03□□□□□ -0.96
PCNX1-208ENST00000554707 NBPF20Q3BBV1 942 aa9.03□□□□□ -0.96
PCNX1-208ENST00000554707 C14orf37Q86TY3 774 aa9.03□□□□□ -0.96
PCNX1-208ENST00000554707 TRAK2O60296 914 aa9.02□□□□□ -0.97
PCNX1-208ENST00000554707 ADH1CP00326 375 aa9.02□□□□□ -0.97
PCNX1-208ENST00000554707 ALDH1A1P00352 501 aa9.02□□□□□ -0.97
PCNX1-208ENST00000554707 GRM5P41594 1212 aa9.02□□□□□ -0.97
PCNX1-208ENST00000554707 VAC14Q08AM6 782 aa9.02□□□□□ -0.97
PCNX1-208ENST00000554707 VASH1Q7L8A9 365 aaPredicted RBP9.02□□□□□ -0.97
PCNX1-208ENST00000554707 SEPT12Q8IYM1 358 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms