RNA–Protein interactions for RNA: ENST00000554590.5

FCF1-206, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-206ENST00000554590 SYCP2Q9BX26 1530 aa6.74□□□□□ -1.33
FCF1-206ENST00000554590 ZNF644Q9H582 1327 aaPredicted RBP6.74□□□□□ -1.33
FCF1-206ENST00000554590 RAB3GAP2Q9H2M9 1393 aa6.73□□□□□ -1.33
FCF1-206ENST00000554590 PRSS12P56730 875 aa6.73□□□□□ -1.33
FCF1-206ENST00000554590 FAM69CQ0P6D2 419 aa6.73□□□□□ -1.33
FCF1-206ENST00000554590 FAM117AQ9C073 453 aa6.73□□□□□ -1.33
FCF1-206ENST00000554590 BCL2L12Q9HB09 334 aa6.73□□□□□ -1.33
FCF1-206ENST00000554590 CROCC2H7BZ55 1655 aa6.73□□□□□ -1.33
FCF1-206ENST00000554590 SPAG9O60271 1321 aaKnown RBP6.73□□□□□ -1.33
FCF1-206ENST00000554590 PRDM15P57071 1507 aaPredicted RBP6.72□□□□□ -1.33
FCF1-206ENST00000554590 ATP7AQ04656 1500 aa6.72□□□□□ -1.33
FCF1-206ENST00000554590 PTPREP23469 700 aa6.72□□□□□ -1.33
FCF1-206ENST00000554590 FAM161AQ3B820 660 aa6.72□□□□□ -1.33
FCF1-206ENST00000554590 CDCA7LQ96GN5 454 aa6.72□□□□□ -1.33
FCF1-206ENST00000554590 RBM27Q9P2N5 1060 aaKnown RBP6.72□□□□□ -1.33
FCF1-206ENST00000554590 DEPDC5O75140 1603 aa6.72□□□□□ -1.33
FCF1-206ENST00000554590 GCC2Q8IWJ2 1684 aa6.71□□□□□ -1.33
FCF1-206ENST00000554590 PTPRTO14522 1441 aa6.71□□□□□ -1.34
FCF1-206ENST00000554590 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
FCF1-206ENST00000554590 COL9A1P20849 921 aa6.71□□□□□ -1.34
FCF1-206ENST00000554590 CLCN1P35523 988 aa6.71□□□□□ -1.34
FCF1-206ENST00000554590 MDM2Q00987 491 aaPredicted RBP6.71□□□□□ -1.34
FCF1-206ENST00000554590 DDRGK1Q96HY6 314 aa6.71□□□□□ -1.34
FCF1-206ENST00000554590 PHOX2BQ99453 314 aa6.71□□□□□ -1.34
FCF1-206ENST00000554590 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
FCF1-206ENST00000554590 ADGRG1Q9Y653 693 aa6.71□□□□□ -1.34
FCF1-206ENST00000554590 PPRC1Q5VV67 1664 aaKnown RBP6.71□□□□□ -1.34
FCF1-206ENST00000554590 DHX57Q6P158 1386 aaKnown RBP6.7□□□□□ -1.34
FCF1-206ENST00000554590 HECW2Q9P2P5 1572 aa6.7□□□□□ -1.34
FCF1-206ENST00000554590 RNF17Q9BXT8 1623 aaKnown RBP6.7□□□□□ -1.34
FCF1-206ENST00000554590 FAM50AQ14320 339 aaKnown RBP6.7□□□□□ -1.34
FCF1-206ENST00000554590 GIGYF2Q6Y7W6 1299 aaKnown RBP6.7□□□□□ -1.34
FCF1-206ENST00000554590 ERICH6Q7L0X2 663 aa6.7□□□□□ -1.34
FCF1-206ENST00000554590 METTL3Q86U44 580 aaKnown RBP6.7□□□□□ -1.34
FCF1-206ENST00000554590 TTC13Q8NBP0 860 aa6.7□□□□□ -1.34
FCF1-206ENST00000554590 KCNH8Q96L42 1107 aa6.7□□□□□ -1.34
FCF1-206ENST00000554590 REPIN1Q9BWE0 567 aaKnown RBP6.7□□□□□ -1.34
FCF1-206ENST00000554590 PCGF6Q9BYE7 350 aa6.7□□□□□ -1.34
FCF1-206ENST00000554590 GPCPD1Q9NPB8 672 aa6.7□□□□□ -1.34
FCF1-206ENST00000554590 A2MP01023 1474 aa6.7□□□□□ -1.34
FCF1-206ENST00000554590 ERBB3P21860 1342 aa6.7□□□□□ -1.34
FCF1-206ENST00000554590 UNC13BO14795 1591 aa6.69□□□□□ -1.34
FCF1-206ENST00000554590 FRMPD1Q5SYB0 1578 aa6.69□□□□□ -1.34
FCF1-206ENST00000554590 PPP1R3GB7ZBB8 358 aa6.69□□□□□ -1.34
FCF1-206ENST00000554590 HNRNPMP52272 730 aaKnown RBP eCLIP6.69□□□□□ -1.34
FCF1-206ENST00000554590 RBM46Q8TBY0 533 aaKnown RBP6.69□□□□□ -1.34
FCF1-206ENST00000554590 PXYLP1Q8TE99 480 aa6.69□□□□□ -1.34
FCF1-206ENST00000554590 ANKRD30BQ9BXX2 1392 aa6.69□□□□□ -1.34
FCF1-206ENST00000554590 CNTLNQ9NXG0 1405 aa6.68□□□□□ -1.34
FCF1-206ENST00000554590 ADGBQ8N7X0 1667 aa6.68□□□□□ -1.34
FCF1-206ENST00000554590 COL17A1Q9UMD9 1497 aaPredicted RBP6.68□□□□□ -1.34
FCF1-206ENST00000554590 RICTORQ6R327 1708 aa6.68□□□□□ -1.34
FCF1-206ENST00000554590 ARHGEF40Q8TER5 1519 aa6.68□□□□□ -1.34
FCF1-206ENST00000554590 SSTR3P32745 418 aaPredicted RBP6.68□□□□□ -1.34
FCF1-206ENST00000554590 AFAP1Q8N556 730 aa6.68□□□□□ -1.34
FCF1-206ENST00000554590 TMUB1Q9BVT8 246 aa6.68□□□□□ -1.34
FCF1-206ENST00000554590 PZPP20742 1482 aa6.67□□□□□ -1.34
FCF1-206ENST00000554590 PLEKHG3A1L390 1219 aa6.67□□□□□ -1.34
FCF1-206ENST00000554590 MS4A1P11836 297 aa6.67□□□□□ -1.34
FCF1-206ENST00000554590 PACS2Q86VP3 889 aa6.67□□□□□ -1.34
FCF1-206ENST00000554590 KIDINS220Q9ULH0 1771 aa6.67□□□□□ -1.34
FCF1-206ENST00000554590 IQGAP3Q86VI3 1631 aa6.66□□□□□ -1.34
FCF1-206ENST00000554590 NLRP7Q8WX94 980 aa6.66□□□□□ -1.34
FCF1-206ENST00000554590 KCNK17Q96T54 332 aa6.66□□□□□ -1.34
FCF1-206ENST00000554590 FAM198AQ9UFP1 575 aa6.66□□□□□ -1.34
FCF1-206ENST00000554590 TSKSQ9UJT2 592 aa6.66□□□□□ -1.34
FCF1-206ENST00000554590 KIF13AQ9H1H9 1805 aa6.66□□□□□ -1.34
FCF1-206ENST00000554590 NOS1P29475 1434 aa6.66□□□□□ -1.34
FCF1-206ENST00000554590 DIP2CQ9Y2E4 1556 aa6.65□□□□□ -1.34
FCF1-206ENST00000554590 TRIM6-TRIM34B2RNG4 842 aa6.65□□□□□ -1.34
FCF1-206ENST00000554590 RGS20O76081 388 aa6.65□□□□□ -1.34
FCF1-206ENST00000554590 NUDT18Q6ZVK8 323 aa6.65□□□□□ -1.34
FCF1-206ENST00000554590 EYA1Q99502 592 aa6.65□□□□□ -1.34
FCF1-206ENST00000554590 KANK1Q14678 1352 aa6.65□□□□□ -1.35
FCF1-206ENST00000554590 MROH1Q8NDA8 1641 aa6.65□□□□□ -1.35
FCF1-206ENST00000554590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.64□□□□□ -1.35
FCF1-206ENST00000554590 ARID3CA6NKF2 412 aa6.64□□□□□ -1.35
FCF1-206ENST00000554590 VARS2Q5ST30 1063 aaKnown RBP6.64□□□□□ -1.35
FCF1-206ENST00000554590 C14orf37Q86TY3 774 aa6.64□□□□□ -1.35
FCF1-206ENST00000554590 TATDN2Q93075 761 aa6.64□□□□□ -1.35
FCF1-206ENST00000554590 MPHOSPH9Q99550 1183 aa6.64□□□□□ -1.35
FCF1-206ENST00000554590 FAM217BQ9NTX9 383 aaPredicted RBP6.64□□□□□ -1.35
FCF1-206ENST00000554590 PNMA3Q9UL41 463 aa6.64□□□□□ -1.35
FCF1-206ENST00000554590 TTBK1Q5TCY1 1321 aaPredicted RBP6.64□□□□□ -1.35
FCF1-206ENST00000554590 NPATQ14207 1427 aa6.64□□□□□ -1.35
FCF1-206ENST00000554590 RCCD1A6NED2 376 aa6.63□□□□□ -1.35
FCF1-206ENST00000554590 NBPF26B4DH59 902 aa6.63□□□□□ -1.35
FCF1-206ENST00000554590 ONECUT3O60422 494 aaPredicted RBP6.63□□□□□ -1.35
FCF1-206ENST00000554590 NUP155O75694 1391 aa6.63□□□□□ -1.35
FCF1-206ENST00000554590 ZFYVE9O95405 1425 aa6.63□□□□□ -1.35
FCF1-206ENST00000554590 ZC3H13Q5T200 1668 aaKnown RBP6.63□□□□□ -1.35
FCF1-206ENST00000554590 Q6ZNB5 142 aa6.63□□□□□ -1.35
FCF1-206ENST00000554590 BEGAINQ9BUH8 593 aa6.63□□□□□ -1.35
FCF1-206ENST00000554590 SLC52A1Q9NWF4 448 aa6.63□□□□□ -1.35
FCF1-206ENST00000554590 EFCAB6Q5THR3 1501 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 PLA2R1Q13018 1463 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 UHRF1BP1Q6BDS2 1440 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 YEATS2Q9ULM3 1422 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 ARHGAP33O14559 1287 aa6.62□□□□□ -1.35
FCF1-206ENST00000554590 PSEN2P49810 448 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms