RNA–Protein interactions for RNA: ENST00000554573.5

RALGAPA1-208, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-208	ENST00000554573	PIF1	Q9H611	641 aa		4.94	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	4.94	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	TREML4	Q6UXN2	200 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	RIC3	Q7Z5B4	369 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	SPIRE2	Q8WWL2	714 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	BACH2	Q9BYV9	841 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	ALG2	Q9H553	416 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	BIN2	Q9UBW5	565 aa	Predicted RBP	4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	TNNI2	P48788	182 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	GUCA2A	Q02747	115 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	SLFNL1	Q499Z3	407 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	VPS9D1	Q9Y2B5	631 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	SBNO2	Q9Y2G9	1366 aa		4.93	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	LOC102724159	A0A0B4J2E5	919 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	PEX14	O75381	377 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	MARS	P56192	900 aa	Known RBP	4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	ZNF211	Q13398	564 aa	Predicted RBP	4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	PWP2	Q15269	919 aa	Known RBP	4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	CRTC2	Q53ET0	693 aa	Predicted RBP	4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	TAF7L	Q5H9L4	462 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	LDLRAD1	Q5T700	205 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	CAPN12	Q6ZSI9	719 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	BANK1	Q8NDB2	785 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	RBM46	Q8TBY0	533 aa	Known RBP	4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	PSMD1	Q99460	953 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	LNPK	Q9C0E8	428 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	KANK4	Q5T7N3	995 aa	Predicted RBP	4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	PPP2R2D	Q66LE6	453 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	NLGN1	Q8N2Q7	840 aa		4.92	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	ANKRD13A	Q8IZ07	590 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	ZNF454	Q8N9F8	522 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	PPME1	Q9Y570	386 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	SOWAHD	A6NJG2	315 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	C3orf80	F5H4A9	247 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	ATG7	O95352	703 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	MAP4K4	O95819	1239 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	PDE6B	P35913	854 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	ZC3H6	P61129	1189 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	TSC1	Q92574	1164 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	SUGT1	Q9Y2Z0	365 aa		4.91	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	HDLBP	Q00341	1268 aa	Known RBP	4.9	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	EVI5L	Q96CN4	794 aa		4.9	□□□□□ -1.62
RALGAPA1-208	ENST00000554573	ERCC5	P28715	1186 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	UBXN4	Q92575	508 aa		4.9	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PPP1R3G	B7ZBB8	358 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PATL2	C9JE40	543 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	BHMG1	C9JSJ3	638 aa	Predicted RBP	4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	MAP3K7	O43318	606 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PARN	O95453	639 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	SSFA2	P28290	1259 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	RAD51AP2	Q09MP3	1159 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	FAM69C	Q0P6D2	419 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	SLC4A5	Q9BY07	1137 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	RBM27	Q9P2N5	1060 aa	Known RBP	4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	TMEM259	Q4ZIN3	620 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	FBXO33	Q7Z6M2	555 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	BCL2L12	Q9HB09	334 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PRDM10	Q9NQV6	1147 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	RIPOR2	Q9Y4F9	1068 aa		4.89	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PADI6	Q6TGC4	694 aa		4.88	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	GABBR1	Q9UBS5	961 aa		4.88	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NOVA2	Q9UNW9	492 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	ABL1	P00519	1130 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	KCNH2	Q12809	1159 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	SUZ12	Q15022	739 aa	Known RBP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	CCDC144B	Q3MJ40	725 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	LCE2A	Q5TA79	106 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PMFBP1	Q8TBY8	1022 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PXYLP1	Q8TE99	480 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NUTM2E	B1AL46	878 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	LILRB3	O75022	631 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	INSM1	Q01101	510 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	TICAM2	Q86XR7	235 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	KCNH8	Q96L42	1107 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	SETDB2	Q96T68	719 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	ZBED2	Q9BTP6	218 aa		4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	DMGDH	Q9UI17	866 aa	Known RBP	4.87	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	EVI5	O60447	810 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	TCEAL1	Q15170	157 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	LARGE2	Q8N3Y3	721 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	CCER1	Q8TC90	406 aa	Predicted RBP	4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	SPACA7	Q96KW9	195 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	C8orf37	Q96NL8	207 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	ADAM33	Q9BZ11	813 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	TANGO6	Q9C0B7	1094 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PIK3R5	Q8WYR1	880 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	WNT2B	Q93097	391 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PCDHGC3	Q9UN70	934 aa		4.86	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PTPRE	P23469	700 aa		4.85	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	FAM174A	Q8TBP5	190 aa		4.85	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NDUFB9	Q9Y6M9	179 aa		4.85	□□□□□ -1.63
RALGAPA1-208	ENST00000554573		H3BRB1	525 aa		4.85	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	4.85	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	FOXD4L3	Q6VB84	417 aa	Predicted RBP	4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms