RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 RIPK4P57078 832 aa21.22■□□□□ 0.99
PPP4R3A-202ENST00000554390 TRIM35Q9UPQ4 493 aa21.22■□□□□ 0.99
PPP4R3A-202ENST00000554390 EFCAB6Q5THR3 1501 aa21.22■□□□□ 0.99
PPP4R3A-202ENST00000554390 SHPRHQ149N8 1683 aa21.21■□□□□ 0.99
PPP4R3A-202ENST00000554390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.21■□□□□ 0.992e-6■■■□□ 14.9
PPP4R3A-202ENST00000554390 RAPGEF3O95398 923 aa21.21■□□□□ 0.99
PPP4R3A-202ENST00000554390 HMOX1P09601 288 aa21.2■□□□□ 0.98
PPP4R3A-202ENST00000554390 KIAA1211Q6ZU35 1233 aa21.2■□□□□ 0.98
PPP4R3A-202ENST00000554390 TNPO1Q92973 898 aaKnown RBP21.18■□□□□ 0.98
PPP4R3A-202ENST00000554390 ZNF518AQ6AHZ1 1483 aa21.18■□□□□ 0.98
PPP4R3A-202ENST00000554390 IQSEC2Q5JU85 1478 aa21.18■□□□□ 0.98
PPP4R3A-202ENST00000554390 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
PPP4R3A-202ENST00000554390 CD109Q6YHK3 1445 aa21.17■□□□□ 0.98
PPP4R3A-202ENST00000554390 ARAP3Q8WWN8 1544 aa21.17■□□□□ 0.98
PPP4R3A-202ENST00000554390 DDIT3P35638 169 aa21.17■□□□□ 0.98
PPP4R3A-202ENST00000554390 ATF7IPQ6VMQ6 1270 aa21.17■□□□□ 0.98
PPP4R3A-202ENST00000554390 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
PPP4R3A-202ENST00000554390 EVC2Q86UK5 1308 aa21.16■□□□□ 0.98
PPP4R3A-202ENST00000554390 IFT172Q9UG01 1749 aa21.16■□□□□ 0.98
PPP4R3A-202ENST00000554390 QRICH2Q9H0J4 1663 aa21.16■□□□□ 0.98
PPP4R3A-202ENST00000554390 SBNO2Q9Y2G9 1366 aa21.16■□□□□ 0.98
PPP4R3A-202ENST00000554390 NPATQ14207 1427 aa21.16■□□□□ 0.98
PPP4R3A-202ENST00000554390 A0A1W2PP64 1363 aa21.15■□□□□ 0.98
PPP4R3A-202ENST00000554390 NCOA3Q9Y6Q9 1424 aa21.14■□□□□ 0.98
PPP4R3A-202ENST00000554390 CD2BP2O95400 341 aaKnown RBP21.14■□□□□ 0.97
PPP4R3A-202ENST00000554390 PLEKHF1Q96S99 279 aa21.14■□□□□ 0.97
PPP4R3A-202ENST00000554390 NRXN1Q9ULB1 1477 aa21.13■□□□□ 0.97
PPP4R3A-202ENST00000554390 GBP4Q96PP9 640 aa21.13■□□□□ 0.97
PPP4R3A-202ENST00000554390 ADGRB3O60242 1522 aa21.13■□□□□ 0.97
PPP4R3A-202ENST00000554390 FYB1O15117 783 aa21.13■□□□□ 0.97
PPP4R3A-202ENST00000554390 MYO3AQ8NEV4 1616 aa21.13■□□□□ 0.97
PPP4R3A-202ENST00000554390 ANKRD45Q5TZF3 282 aa21.12■□□□□ 0.97
PPP4R3A-202ENST00000554390 PRAM1Q96QH2 718 aa21.12■□□□□ 0.97
PPP4R3A-202ENST00000554390 TSPYL6Q8N831 410 aa21.12■□□□□ 0.97
PPP4R3A-202ENST00000554390 KIDINS220Q9ULH0 1771 aa21.12■□□□□ 0.97
PPP4R3A-202ENST00000554390 ASXL2Q76L83 1435 aa21.12■□□□□ 0.97
PPP4R3A-202ENST00000554390 IDI1Q13907 227 aa21.12■□□□□ 0.97
PPP4R3A-202ENST00000554390 SKOR2Q2VWA4 1001 aaPredicted RBP21.12■□□□□ 0.97
PPP4R3A-202ENST00000554390 ATAD2Q6PL18 1390 aa21.11■□□□□ 0.97
PPP4R3A-202ENST00000554390 CCDC173Q0VFZ6 552 aa21.11■□□□□ 0.97
PPP4R3A-202ENST00000554390 APBB1O00213 710 aa21.1■□□□□ 0.97
PPP4R3A-202ENST00000554390 DDX19BQ9UMR2 479 aa21.1■□□□□ 0.97
PPP4R3A-202ENST00000554390 CCDC27Q2M243 656 aa21.1■□□□□ 0.97
PPP4R3A-202ENST00000554390 ZSCAN30Q86W11 494 aa21.1■□□□□ 0.97
PPP4R3A-202ENST00000554390 SMC5Q8IY18 1101 aa21.1■□□□□ 0.97
PPP4R3A-202ENST00000554390 PHACTR3Q96KR7 559 aa21.1■□□□□ 0.97
PPP4R3A-202ENST00000554390 PRKAR2BP31323 418 aa21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 RAB3GAP1Q15042 981 aa21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 CABP1Q9NZU7 370 aa21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 NEURL4Q96JN8 1562 aa21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 SNX21Q969T3 373 aa21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 HSP90AB1P08238 724 aaKnown RBP21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 RBM10P98175 930 aaKnown RBP21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 PPP1R9BQ96SB3 815 aa21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 ZBTB40Q9NUA8 1239 aa21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 CIZ1Q9ULV3 898 aaPredicted RBP21.09■□□□□ 0.97
PPP4R3A-202ENST00000554390 ADGRB1O14514 1584 aa21.08■□□□□ 0.97
PPP4R3A-202ENST00000554390 OFD1O75665 1012 aa21.08■□□□□ 0.97
PPP4R3A-202ENST00000554390 ZRANB1Q9UGI0 708 aa21.08■□□□□ 0.97
PPP4R3A-202ENST00000554390 NASPP49321 788 aaPredicted RBP21.08■□□□□ 0.96
PPP4R3A-202ENST00000554390 ANKRD36BQ8N2N9 1353 aa21.07■□□□□ 0.96
PPP4R3A-202ENST00000554390 CALD1Q05682 793 aaKnown RBP21.07■□□□□ 0.96
PPP4R3A-202ENST00000554390 DCTN1Q14203 1278 aa21.07■□□□□ 0.96
PPP4R3A-202ENST00000554390 DIAPH1O60610 1272 aaKnown RBP21.06■□□□□ 0.96
PPP4R3A-202ENST00000554390 RBM25P49756 843 aaKnown RBP21.06■□□□□ 0.96
PPP4R3A-202ENST00000554390 TULP4Q9NRJ4 1543 aa21.06■□□□□ 0.96
PPP4R3A-202ENST00000554390 ZC3H13Q5T200 1668 aaKnown RBP21.06■□□□□ 0.96
PPP4R3A-202ENST00000554390 SETBP1Q9Y6X0 1596 aa21.06■□□□□ 0.96
PPP4R3A-202ENST00000554390 FAM83GA6ND36 823 aa21.05■□□□□ 0.96
PPP4R3A-202ENST00000554390 MSNP26038 577 aaKnown RBP21.05■□□□□ 0.96
PPP4R3A-202ENST00000554390 FBXO31Q5XUX0 539 aaPredicted RBP21.05■□□□□ 0.96
PPP4R3A-202ENST00000554390 WAPLQ7Z5K2 1190 aa21.05■□□□□ 0.96
PPP4R3A-202ENST00000554390 PPLO60437 1756 aa21.04■□□□□ 0.96
PPP4R3A-202ENST00000554390 PTMSP20962 102 aa21.04■□□□□ 0.96
PPP4R3A-202ENST00000554390 HDAC1Q13547 482 aaPredicted RBP21.04■□□□□ 0.96
PPP4R3A-202ENST00000554390 ANP32BQ92688 251 aaKnown RBP21.04■□□□□ 0.96
PPP4R3A-202ENST00000554390 NCKAP5LQ9HCH0 1330 aa21.04■□□□□ 0.96
PPP4R3A-202ENST00000554390 VGFO15240 615 aaPredicted RBP21.03■□□□□ 0.96
PPP4R3A-202ENST00000554390 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.03■□□□□ 0.96
PPP4R3A-202ENST00000554390 CHD1LQ86WJ1 897 aa21.03■□□□□ 0.96
PPP4R3A-202ENST00000554390 EMILIN1Q9Y6C2 1016 aa21.03■□□□□ 0.96
PPP4R3A-202ENST00000554390 PRDM4Q9UKN5 801 aa21.02■□□□□ 0.96
PPP4R3A-202ENST00000554390 GLI2P10070 1586 aa21.02■□□□□ 0.96
PPP4R3A-202ENST00000554390 KRT24Q2M2I5 525 aa21.01■□□□□ 0.95
PPP4R3A-202ENST00000554390 FAM13BQ9NYF5 915 aa21.01■□□□□ 0.95
PPP4R3A-202ENST00000554390 NUCB1Q02818 461 aa21■□□□□ 0.95
PPP4R3A-202ENST00000554390 CDK19Q9BWU1 502 aa21■□□□□ 0.95
PPP4R3A-202ENST00000554390 C16orf71Q8IYS4 520 aaPredicted RBP21■□□□□ 0.95
PPP4R3A-202ENST00000554390 R3HCC1Q9Y3T6 440 aaKnown RBP21■□□□□ 0.95
PPP4R3A-202ENST00000554390 LMTK2Q8IWU2 1503 aa20.99■□□□□ 0.95
PPP4R3A-202ENST00000554390 TERF1P54274 439 aa20.99■□□□□ 0.95
PPP4R3A-202ENST00000554390 SIRT2Q8IXJ6 389 aa20.99■□□□□ 0.95
PPP4R3A-202ENST00000554390 CHAMP1Q96JM3 812 aa20.99■□□□□ 0.95
PPP4R3A-202ENST00000554390 SOX12O15370 315 aa20.98■□□□□ 0.95
PPP4R3A-202ENST00000554390 SSFA2P28290 1259 aa20.98■□□□□ 0.95
PPP4R3A-202ENST00000554390 FRMPD1Q5SYB0 1578 aa20.98■□□□□ 0.95
PPP4R3A-202ENST00000554390 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
PPP4R3A-202ENST00000554390 RRS1Q15050 365 aaKnown RBP20.98■□□□□ 0.95
PPP4R3A-202ENST00000554390 DDX49Q9Y6V7 483 aaKnown RBP20.98■□□□□ 0.95
PPP4R3A-202ENST00000554390 TBC1D9Q6ZT07 1266 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms