RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 CDK19Q9BWU1 502 aa31.73■■■□□ 2.67
RCCD1-202ENST00000554302 BRWD3Q6RI45 1802 aa31.72■■■□□ 2.67
RCCD1-202ENST00000554302 TOPAZ1Q8N9V7 1692 aa31.71■■■□□ 2.67
RCCD1-202ENST00000554302 COL14A1Q05707 1796 aaKnown RBP31.71■■■□□ 2.67
RCCD1-202ENST00000554302 SEPT12Q8IYM1 358 aa31.7■■■□□ 2.67
RCCD1-202ENST00000554302 POLR3AO14802 1390 aaPredicted RBP31.69■■■□□ 2.66
RCCD1-202ENST00000554302 MSH5O43196 834 aa31.69■■■□□ 2.66
RCCD1-202ENST00000554302 BTG4Q9NY30 223 aa31.67■■■□□ 2.66
RCCD1-202ENST00000554302 PAK3O75914 559 aaPredicted RBP31.66■■■□□ 2.66
RCCD1-202ENST00000554302 CCDC61Q9Y6R9 512 aa31.66■■■□□ 2.66
RCCD1-202ENST00000554302 PLEKHG3A1L390 1219 aa31.65■■■□□ 2.66
RCCD1-202ENST00000554302 CCDC9Q9Y3X0 531 aaKnown RBP31.65■■■□□ 2.66
RCCD1-202ENST00000554302 SRCAPQ6ZRS2 3230 aa31.64■■■□□ 2.65
RCCD1-202ENST00000554302 ACEP12821 1306 aa31.63■■■□□ 2.65
RCCD1-202ENST00000554302 BLMP54132 1417 aaPredicted RBP31.63■■■□□ 2.65
RCCD1-202ENST00000554302 NBPF8Q3BBV2 869 aa31.61■■■□□ 2.65
RCCD1-202ENST00000554302 PHRF1Q9P1Y6 1649 aaKnown RBP31.6■■■□□ 2.65
RCCD1-202ENST00000554302 L3MBTL2Q969R5 705 aa31.6■■■□□ 2.65
RCCD1-202ENST00000554302 CENPJQ9HC77 1338 aaPredicted RBP31.59■■■□□ 2.65
RCCD1-202ENST00000554302 PPP4R3CPQ6ZMV5 832 aa31.58■■■□□ 2.65
RCCD1-202ENST00000554302 KRT27Q7Z3Y8 459 aa31.58■■■□□ 2.65
RCCD1-202ENST00000554302 SPATA31A5Q5VU36 1347 aa31.56■■■□□ 2.64
RCCD1-202ENST00000554302 SPATA31A7Q8IWB4 1347 aa31.56■■■□□ 2.64
RCCD1-202ENST00000554302 PRDM11Q9NQV5 511 aa31.56■■■□□ 2.64
RCCD1-202ENST00000554302 KIAA0232Q92628 1395 aa31.56■■■□□ 2.64
RCCD1-202ENST00000554302 FAM98CQ17RN3 349 aaKnown RBP31.55■■■□□ 2.64
RCCD1-202ENST00000554302 QRICH2Q9H0J4 1663 aa31.54■■■□□ 2.64
RCCD1-202ENST00000554302 SIN3AQ96ST3 1273 aa31.53■■■□□ 2.64
RCCD1-202ENST00000554302 ZRANB1Q9UGI0 708 aa31.53■■■□□ 2.64
RCCD1-202ENST00000554302 TRPM1Q7Z4N2 1603 aa31.52■■■□□ 2.64
RCCD1-202ENST00000554302 PPIP5K1Q6PFW1 1433 aa31.51■■■□□ 2.64
RCCD1-202ENST00000554302 SRPK2P78362 688 aaKnown RBP31.51■■■□□ 2.63
RCCD1-202ENST00000554302 KCNA4P22459 653 aa31.5■■■□□ 2.63
RCCD1-202ENST00000554302 NUTM2GQ5VZR2 741 aa31.5■■■□□ 2.63
RCCD1-202ENST00000554302 CABP2Q9NPB3 220 aa31.5■■■□□ 2.63
RCCD1-202ENST00000554302 THSD7AQ9UPZ6 1657 aa31.5■■■□□ 2.63
RCCD1-202ENST00000554302 NRKQ7Z2Y5 1582 aa31.49■■■□□ 2.63
RCCD1-202ENST00000554302 USP19O94966 1318 aa31.48■■■□□ 2.63
RCCD1-202ENST00000554302 CHRNA2Q15822 529 aa31.47■■■□□ 2.63
RCCD1-202ENST00000554302 DEFB132Q7Z7B7 95 aa31.47■■■□□ 2.63
RCCD1-202ENST00000554302 ABTB2Q8N961 1025 aa31.47■■■□□ 2.63
RCCD1-202ENST00000554302 BRD4O60885 1362 aaPredicted RBP31.46■■■□□ 2.63
RCCD1-202ENST00000554302 A0A0G2JS52 829 aa31.46■■■□□ 2.63
RCCD1-202ENST00000554302 ZC3H6P61129 1189 aaKnown RBP31.46■■■□□ 2.63
RCCD1-202ENST00000554302 MYT1Q01538 1121 aa31.46■■■□□ 2.63
RCCD1-202ENST00000554302 SPATA31A1Q5TZJ5 1347 aa31.46■■■□□ 2.63
RCCD1-202ENST00000554302 CPDO75976 1380 aa31.44■■■□□ 2.62
RCCD1-202ENST00000554302 SF3B2Q13435 895 aaKnown RBP31.44■■■□□ 2.62
RCCD1-202ENST00000554302 LMO7Q8WWI1 1683 aa31.41■■■□□ 2.62
RCCD1-202ENST00000554302 CABP1Q9NZU7 370 aa31.41■■■□□ 2.62
RCCD1-202ENST00000554302 NEUROD1Q13562 356 aa31.4■■■□□ 2.62
RCCD1-202ENST00000554302 NLRP13Q86W25 1043 aa31.4■■■□□ 2.62
RCCD1-202ENST00000554302 CAMTA1Q9Y6Y1 1673 aa31.4■■■□□ 2.62
RCCD1-202ENST00000554302 USP6P35125 1406 aa31.4■■■□□ 2.62
RCCD1-202ENST00000554302 STRN4Q9NRL3 753 aa31.38■■■□□ 2.61
RCCD1-202ENST00000554302 ROCK2O75116 1388 aaKnown RBP31.38■■■□□ 2.61
RCCD1-202ENST00000554302 SSH2Q76I76 1423 aa31.38■■■□□ 2.61
RCCD1-202ENST00000554302 GCP02774 474 aa31.37■■■□□ 2.61
RCCD1-202ENST00000554302 EVC2Q86UK5 1308 aa31.37■■■□□ 2.61
RCCD1-202ENST00000554302 FAM182BQ5T319 152 aa31.34■■■□□ 2.61
RCCD1-202ENST00000554302 RGPD1P0DJD0 1748 aa31.34■■■□□ 2.61
RCCD1-202ENST00000554302 BAG6P46379 1132 aa31.33■■■□□ 2.61
RCCD1-202ENST00000554302 BARGINQ6ZT62 677 aa31.33■■■□□ 2.61
RCCD1-202ENST00000554302 SLIT3O75094 1523 aa31.32■■■□□ 2.6
RCCD1-202ENST00000554302 EVA1CP58658 441 aa31.31■■■□□ 2.6
RCCD1-202ENST00000554302 LARP1Q6PKG0 1096 aaKnown RBP31.3■■■□□ 2.6
RCCD1-202ENST00000554302 PIK3C2AO00443 1686 aa31.29■■■□□ 2.6
RCCD1-202ENST00000554302 DISP2A7MBM2 1401 aa31.29■■■□□ 2.6
RCCD1-202ENST00000554302 TNS1Q9HBL0 1735 aaKnown RBP31.28■■■□□ 2.6
RCCD1-202ENST00000554302 COL5A2P05997 1499 aaPredicted RBP31.27■■■□□ 2.6
RCCD1-202ENST00000554302 NLRP6P59044 892 aa31.27■■■□□ 2.6
RCCD1-202ENST00000554302 USP35Q9P2H5 1018 aa31.27■■■□□ 2.6
RCCD1-202ENST00000554302 ZNF692Q9BU19 519 aaPredicted RBP31.26■■■□□ 2.59
RCCD1-202ENST00000554302 SBNO2Q9Y2G9 1366 aa31.26■■■□□ 2.59
RCCD1-202ENST00000554302 AKAP12Q02952 1782 aa31.25■■■□□ 2.59
RCCD1-202ENST00000554302 FAM196AQ6ZSG2 479 aa31.25■■■□□ 2.59
RCCD1-202ENST00000554302 TCP11L2Q8N4U5 519 aa31.25■■■□□ 2.59
RCCD1-202ENST00000554302 THRAP3Q9Y2W1 955 aaKnown RBP31.25■■■□□ 2.59
RCCD1-202ENST00000554302 AATKQ6ZMQ8 1374 aa31.24■■■□□ 2.59
RCCD1-202ENST00000554302 CPSF1Q10570 1443 aaKnown RBP31.24■■■□□ 2.59
RCCD1-202ENST00000554302 EN1Q05925 392 aaPredicted RBP31.23■■■□□ 2.59
RCCD1-202ENST00000554302 TTC21BQ7Z4L5 1316 aa31.22■■■□□ 2.59
RCCD1-202ENST00000554302 COL18A1P39060 1754 aa31.21■■■□□ 2.59
RCCD1-202ENST00000554302 CRB1P82279 1406 aa31.2■■■□□ 2.59
RCCD1-202ENST00000554302 PARP4Q9UKK3 1724 aaKnown RBP31.19■■■□□ 2.58
RCCD1-202ENST00000554302 PDE3BQ13370 1112 aa31.18■■■□□ 2.58
RCCD1-202ENST00000554302 TTC21AQ8NDW8 1320 aa31.18■■■□□ 2.58
RCCD1-202ENST00000554302 TRIM37O94972 964 aa31.16■■■□□ 2.58
RCCD1-202ENST00000554302 CARD11Q9BXL7 1154 aa31.16■■■□□ 2.58
RCCD1-202ENST00000554302 LRP5O75197 1615 aa31.14■■■□□ 2.58
RCCD1-202ENST00000554302 ARHGEF25Q86VW2 580 aa31.14■■■□□ 2.58
RCCD1-202ENST00000554302 CAMKK2Q96RR4 588 aa31.14■■■□□ 2.58
RCCD1-202ENST00000554302 MON2Q7Z3U7 1717 aa31.13■■■□□ 2.57
RCCD1-202ENST00000554302 EZH2Q15910 746 aaKnown RBP31.13■■■□□ 2.57
RCCD1-202ENST00000554302 AXIN2Q9Y2T1 843 aa31.13■■■□□ 2.57
RCCD1-202ENST00000554302 KTN1Q86UP2 1357 aaKnown RBP31.13■■■□□ 2.57
RCCD1-202ENST00000554302 KCNH5Q8NCM2 988 aa31.12■■■□□ 2.57
RCCD1-202ENST00000554302 TONSLQ96HA7 1378 aa31.12■■■□□ 2.57
RCCD1-202ENST00000554302 ZBTB7CA1YPR0 619 aa31.11■■■□□ 2.57
RCCD1-202ENST00000554302 PSDA5PKW4 1024 aaPredicted RBP31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms