RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ITSN1Q15811 1721 aa27.09■■□□□ 1.93
CPSF2-203ENST00000554290 A0A0G2JS52 829 aa27.05■■□□□ 1.92
CPSF2-203ENST00000554290 PLEKHG3A1L390 1219 aa27.05■■□□□ 1.92
CPSF2-203ENST00000554290 MYT1Q01538 1121 aa27.05■■□□□ 1.92
CPSF2-203ENST00000554290 PRDM11Q9NQV5 511 aa27.05■■□□□ 1.92
CPSF2-203ENST00000554290 ZRANB1Q9UGI0 708 aa27.05■■□□□ 1.92
CPSF2-203ENST00000554290 ACEP12821 1306 aa27.05■■□□□ 1.92
CPSF2-203ENST00000554290 COL14A1Q05707 1796 aaKnown RBP27.04■■□□□ 1.92
CPSF2-203ENST00000554290 NBPF8Q3BBV2 869 aa27.04■■□□□ 1.92
CPSF2-203ENST00000554290 KRT27Q7Z3Y8 459 aa27.04■■□□□ 1.92
CPSF2-203ENST00000554290 CENPJQ9HC77 1338 aaPredicted RBP27.04■■□□□ 1.92
CPSF2-203ENST00000554290 POLR3AO14802 1390 aaPredicted RBP27.04■■□□□ 1.92
CPSF2-203ENST00000554290 BLMP54132 1417 aaPredicted RBP27.04■■□□□ 1.92
CPSF2-203ENST00000554290 L3MBTL2Q969R5 705 aa27.03■■□□□ 1.92
CPSF2-203ENST00000554290 SRPK2P78362 688 aaKnown RBP27.02■■□□□ 1.92
CPSF2-203ENST00000554290 SF3B2Q13435 895 aaKnown RBP27.02■■□□□ 1.92
CPSF2-203ENST00000554290 FAM98CQ17RN3 349 aaKnown RBP27.01■■□□□ 1.91
CPSF2-203ENST00000554290 EP400Q96L91 3159 aa26.99■■□□□ 1.91
CPSF2-203ENST00000554290 BRWD3Q6RI45 1802 aa26.99■■□□□ 1.91
CPSF2-203ENST00000554290 NUTM2GQ5VZR2 741 aa26.98■■□□□ 1.91
CPSF2-203ENST00000554290 NRAPQ86VF7 1730 aa26.98■■□□□ 1.91
CPSF2-203ENST00000554290 KIAA0232Q92628 1395 aa26.97■■□□□ 1.91
CPSF2-203ENST00000554290 SPATA31A5Q5VU36 1347 aa26.97■■□□□ 1.91
CPSF2-203ENST00000554290 SPATA31A7Q8IWB4 1347 aa26.97■■□□□ 1.91
CPSF2-203ENST00000554290 SIN3AQ96ST3 1273 aa26.97■■□□□ 1.91
CPSF2-203ENST00000554290 TOPAZ1Q8N9V7 1692 aa26.97■■□□□ 1.91
CPSF2-203ENST00000554290 CRYBG1Q9Y4K1 1723 aa26.96■■□□□ 1.91
CPSF2-203ENST00000554290 ABTB2Q8N961 1025 aa26.96■■□□□ 1.91
CPSF2-203ENST00000554290 ZC3H6P61129 1189 aaKnown RBP26.95■■□□□ 1.9
CPSF2-203ENST00000554290 CABP2Q9NPB3 220 aa26.95■■□□□ 1.9
CPSF2-203ENST00000554290 PPIP5K1Q6PFW1 1433 aa26.94■■□□□ 1.9
CPSF2-203ENST00000554290 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
CPSF2-203ENST00000554290 CHRNA2Q15822 529 aa26.94■■□□□ 1.9
CPSF2-203ENST00000554290 DEFB132Q7Z7B7 95 aa26.92■■□□□ 1.9
CPSF2-203ENST00000554290 NLRP13Q86W25 1043 aa26.91■■□□□ 1.9
CPSF2-203ENST00000554290 STRN4Q9NRL3 753 aa26.91■■□□□ 1.9
CPSF2-203ENST00000554290 BRD4O60885 1362 aaPredicted RBP26.9■■□□□ 1.9
CPSF2-203ENST00000554290 PHRF1Q9P1Y6 1649 aaKnown RBP26.9■■□□□ 1.9
CPSF2-203ENST00000554290 SPATA31A1Q5TZJ5 1347 aa26.89■■□□□ 1.89
CPSF2-203ENST00000554290 EVA1CP58658 441 aa26.88■■□□□ 1.89
CPSF2-203ENST00000554290 CABP1Q9NZU7 370 aa26.88■■□□□ 1.89
CPSF2-203ENST00000554290 QRICH2Q9H0J4 1663 aa26.88■■□□□ 1.89
CPSF2-203ENST00000554290 EVC2Q86UK5 1308 aa26.88■■□□□ 1.89
CPSF2-203ENST00000554290 USP19O94966 1318 aa26.87■■□□□ 1.89
CPSF2-203ENST00000554290 ROCK2O75116 1388 aaKnown RBP26.86■■□□□ 1.89
CPSF2-203ENST00000554290 BAG6P46379 1132 aa26.86■■□□□ 1.89
CPSF2-203ENST00000554290 CPDO75976 1380 aa26.85■■□□□ 1.89
CPSF2-203ENST00000554290 GCP02774 474 aa26.84■■□□□ 1.89
CPSF2-203ENST00000554290 TRPM1Q7Z4N2 1603 aa26.83■■□□□ 1.89
CPSF2-203ENST00000554290 USP6P35125 1406 aa26.82■■□□□ 1.88
CPSF2-203ENST00000554290 NRKQ7Z2Y5 1582 aa26.81■■□□□ 1.88
CPSF2-203ENST00000554290 NLRP6P59044 892 aa26.81■■□□□ 1.88
CPSF2-203ENST00000554290 FAM182BQ5T319 152 aa26.81■■□□□ 1.88
CPSF2-203ENST00000554290 USP35Q9P2H5 1018 aa26.81■■□□□ 1.88
CPSF2-203ENST00000554290 THSD7AQ9UPZ6 1657 aa26.81■■□□□ 1.88
CPSF2-203ENST00000554290 SSH2Q76I76 1423 aa26.81■■□□□ 1.88
CPSF2-203ENST00000554290 BARGINQ6ZT62 677 aa26.79■■□□□ 1.88
CPSF2-203ENST00000554290 ZNF692Q9BU19 519 aaPredicted RBP26.78■■□□□ 1.88
CPSF2-203ENST00000554290 CAMTA1Q9Y6Y1 1673 aa26.78■■□□□ 1.88
CPSF2-203ENST00000554290 LARP1Q6PKG0 1096 aaKnown RBP26.77■■□□□ 1.88
CPSF2-203ENST00000554290 FAM196AQ6ZSG2 479 aa26.76■■□□□ 1.87
CPSF2-203ENST00000554290 TCP11L2Q8N4U5 519 aa26.75■■□□□ 1.87
CPSF2-203ENST00000554290 PDE3BQ13370 1112 aa26.74■■□□□ 1.87
CPSF2-203ENST00000554290 THRAP3Q9Y2W1 955 aaKnown RBP26.74■■□□□ 1.87
CPSF2-203ENST00000554290 ZBTB7CA1YPR0 619 aa26.73■■□□□ 1.87
CPSF2-203ENST00000554290 EN1Q05925 392 aaPredicted RBP26.73■■□□□ 1.87
CPSF2-203ENST00000554290 LMO7Q8WWI1 1683 aa26.73■■□□□ 1.87
CPSF2-203ENST00000554290 RGPD1P0DJD0 1748 aa26.71■■□□□ 1.87
CPSF2-203ENST00000554290 AATKQ6ZMQ8 1374 aa26.71■■□□□ 1.87
CPSF2-203ENST00000554290 CARD11Q9BXL7 1154 aa26.7■■□□□ 1.86
CPSF2-203ENST00000554290 TTC21BQ7Z4L5 1316 aa26.69■■□□□ 1.86
CPSF2-203ENST00000554290 COL5A2P05997 1499 aaPredicted RBP26.68■■□□□ 1.86
CPSF2-203ENST00000554290 DISP2A7MBM2 1401 aa26.68■■□□□ 1.86
CPSF2-203ENST00000554290 TRIM37O94972 964 aa26.68■■□□□ 1.86
CPSF2-203ENST00000554290 SLIT3O75094 1523 aa26.68■■□□□ 1.86
CPSF2-203ENST00000554290 TTC21AQ8NDW8 1320 aa26.67■■□□□ 1.86
CPSF2-203ENST00000554290 KCNH5Q8NCM2 988 aa26.67■■□□□ 1.86
CPSF2-203ENST00000554290 TONSLQ96HA7 1378 aa26.67■■□□□ 1.86
CPSF2-203ENST00000554290 SBNO2Q9Y2G9 1366 aa26.67■■□□□ 1.86
CPSF2-203ENST00000554290 CRB1P82279 1406 aa26.66■■□□□ 1.86
CPSF2-203ENST00000554290 SRCAPQ6ZRS2 3230 aa26.66■■□□□ 1.86
CPSF2-203ENST00000554290 KTN1Q86UP2 1357 aaKnown RBP26.65■■□□□ 1.86
CPSF2-203ENST00000554290 PSDA5PKW4 1024 aaPredicted RBP26.64■■□□□ 1.86
CPSF2-203ENST00000554290 APBA3O96018 575 aa26.64■■□□□ 1.86
CPSF2-203ENST00000554290 CPSF1Q10570 1443 aaKnown RBP26.64■■□□□ 1.85
CPSF2-203ENST00000554290 PIK3C2AO00443 1686 aa26.63■■□□□ 1.85
CPSF2-203ENST00000554290 C11orf95C9JLR9 678 aaPredicted RBP26.62■■□□□ 1.85
CPSF2-203ENST00000554290 EZH2Q15910 746 aaKnown RBP26.62■■□□□ 1.85
CPSF2-203ENST00000554290 TOM1L2Q6ZVM7 507 aa26.62■■□□□ 1.85
CPSF2-203ENST00000554290 ARHGEF25Q86VW2 580 aa26.61■■□□□ 1.85
CPSF2-203ENST00000554290 CAMKK2Q96RR4 588 aa26.61■■□□□ 1.85
CPSF2-203ENST00000554290 TNS1Q9HBL0 1735 aaKnown RBP26.61■■□□□ 1.85
CPSF2-203ENST00000554290 PARD3Q8TEW0 1356 aa26.59■■□□□ 1.85
CPSF2-203ENST00000554290 SOX12O15370 315 aa26.59■■□□□ 1.85
CPSF2-203ENST00000554290 AXIN2Q9Y2T1 843 aa26.59■■□□□ 1.85
CPSF2-203ENST00000554290 WDR17Q8IZU2 1322 aa26.59■■□□□ 1.85
CPSF2-203ENST00000554290 AKAP12Q02952 1782 aa26.58■■□□□ 1.85
CPSF2-203ENST00000554290 R3HDM1Q15032 1099 aaKnown RBP26.57■■□□□ 1.84
CPSF2-203ENST00000554290 TMC1Q8TDI8 760 aa26.57■■□□□ 1.84
CPSF2-203ENST00000554290 DDB1Q16531 1140 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms