RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
ACTN1-212ENST00000554158 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
ACTN1-212ENST00000554158 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-212ENST00000554158 NGDNQ8NEJ9 315 aaKnown RBP11.99□□□□□ -0.49
ACTN1-212ENST00000554158 BTG4Q9NY30 223 aa11.99□□□□□ -0.49
ACTN1-212ENST00000554158 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
ACTN1-212ENST00000554158 ADGRB2O60241 1585 aa11.99□□□□□ -0.49
ACTN1-212ENST00000554158 TRPM3Q9HCF6 1732 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-212ENST00000554158 ALS2Q96Q42 1657 aa11.98□□□□□ -0.49
ACTN1-212ENST00000554158 PSDA5PKW4 1024 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-212ENST00000554158 FAM83GA6ND36 823 aa11.98□□□□□ -0.49
ACTN1-212ENST00000554158 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-212ENST00000554158 MINK1Q8N4C8 1332 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-212ENST00000554158 HIRIP3Q9BW71 556 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-212ENST00000554158 TRAK1Q9UPV9 953 aa11.97□□□□□ -0.49
ACTN1-212ENST00000554158 PRDM11Q9NQV5 511 aa11.96□□□□□ -0.49
ACTN1-212ENST00000554158 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.5
ACTN1-212ENST00000554158 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
ACTN1-212ENST00000554158 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-212ENST00000554158 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
ACTN1-212ENST00000554158 EN1Q05925 392 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-212ENST00000554158 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
ACTN1-212ENST00000554158 HRCP23327 699 aa11.93□□□□□ -0.5
ACTN1-212ENST00000554158 EVA1CP58658 441 aa11.93□□□□□ -0.5
ACTN1-212ENST00000554158 CRYBG1Q9Y4K1 1723 aa11.93□□□□□ -0.5
ACTN1-212ENST00000554158 SPATA31A5Q5VU36 1347 aa11.92□□□□□ -0.5
ACTN1-212ENST00000554158 SPATA31A7Q8IWB4 1347 aa11.92□□□□□ -0.5
ACTN1-212ENST00000554158 WASLO00401 505 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-212ENST00000554158 STRN4Q9NRL3 753 aa11.92□□□□□ -0.5
ACTN1-212ENST00000554158 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
ACTN1-212ENST00000554158 PHRF1Q9P1Y6 1649 aaKnown RBP11.91□□□□□ -0.5
ACTN1-212ENST00000554158 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
ACTN1-212ENST00000554158 FAM182BQ5T319 152 aa11.91□□□□□ -0.5
ACTN1-212ENST00000554158 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
ACTN1-212ENST00000554158 DCAF11Q8TEB1 546 aa11.91□□□□□ -0.5
ACTN1-212ENST00000554158 THSD7AQ9UPZ6 1657 aa11.91□□□□□ -0.5
ACTN1-212ENST00000554158 ADGRB1O14514 1584 aa11.9□□□□□ -0.5
ACTN1-212ENST00000554158 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-212ENST00000554158 PDE3BQ13370 1112 aa11.9□□□□□ -0.5
ACTN1-212ENST00000554158 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
ACTN1-212ENST00000554158 ATP7BP35670 1465 aa11.89□□□□□ -0.51
ACTN1-212ENST00000554158 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
ACTN1-212ENST00000554158 USP35Q9P2H5 1018 aa11.89□□□□□ -0.51
ACTN1-212ENST00000554158 TRIM37O94972 964 aa11.88□□□□□ -0.51
ACTN1-212ENST00000554158 APBA3O96018 575 aa11.88□□□□□ -0.51
ACTN1-212ENST00000554158 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
ACTN1-212ENST00000554158 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
ACTN1-212ENST00000554158 NBPF14Q5TI25 921 aa11.88□□□□□ -0.51
ACTN1-212ENST00000554158 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
ACTN1-212ENST00000554158 SPATA31A1Q5TZJ5 1347 aa11.87□□□□□ -0.51
ACTN1-212ENST00000554158 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
ACTN1-212ENST00000554158 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
ACTN1-212ENST00000554158 ZC3H6P61129 1189 aaKnown RBP11.87□□□□□ -0.51
ACTN1-212ENST00000554158 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
ACTN1-212ENST00000554158 EZH2Q15910 746 aaKnown RBP11.87□□□□□ -0.51
ACTN1-212ENST00000554158 NUDT16Q96DE0 195 aaKnown RBP11.87□□□□□ -0.51
ACTN1-212ENST00000554158 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
ACTN1-212ENST00000554158 RAB3GAP2Q9H2M9 1393 aa11.87□□□□□ -0.51
ACTN1-212ENST00000554158 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
ACTN1-212ENST00000554158 PPP1R1BQ9UD71 204 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-212ENST00000554158 ABTB2Q8N961 1025 aa11.85□□□□□ -0.51
ACTN1-212ENST00000554158 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
ACTN1-212ENST00000554158 RREB1Q92766 1687 aa11.84□□□□□ -0.51
ACTN1-212ENST00000554158 NUP188Q5SRE5 1749 aa11.84□□□□□ -0.51
ACTN1-212ENST00000554158 KIAA1210Q9ULL0 1709 aa11.84□□□□□ -0.51
ACTN1-212ENST00000554158 CDK19Q9BWU1 502 aa11.84□□□□□ -0.51
ACTN1-212ENST00000554158 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
ACTN1-212ENST00000554158 C11orf95C9JLR9 678 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-212ENST00000554158 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
ACTN1-212ENST00000554158 TCP11L2Q8N4U5 519 aa11.83□□□□□ -0.52
ACTN1-212ENST00000554158 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
ACTN1-212ENST00000554158 SSH2Q76I76 1423 aa11.83□□□□□ -0.52
ACTN1-212ENST00000554158 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.52
ACTN1-212ENST00000554158 ACEP12821 1306 aa11.83□□□□□ -0.52
ACTN1-212ENST00000554158 SRPK2P78362 688 aaKnown RBP11.82□□□□□ -0.52
ACTN1-212ENST00000554158 BARGINQ6ZT62 677 aa11.82□□□□□ -0.52
ACTN1-212ENST00000554158 NLRP13Q86W25 1043 aa11.82□□□□□ -0.52
ACTN1-212ENST00000554158 CAMKK2Q96RR4 588 aa11.82□□□□□ -0.52
ACTN1-212ENST00000554158 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
ACTN1-212ENST00000554158 AKAP12Q02952 1782 aa11.82□□□□□ -0.52
ACTN1-212ENST00000554158 PARP4Q9UKK3 1724 aaKnown RBP11.81□□□□□ -0.52
ACTN1-212ENST00000554158 THRAP3Q9Y2W1 955 aaKnown RBP11.81□□□□□ -0.52
ACTN1-212ENST00000554158 YY1P25490 414 aa11.8□□□□□ -0.52
ACTN1-212ENST00000554158 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
ACTN1-212ENST00000554158 SPON1Q9HCB6 807 aa11.8□□□□□ -0.52
ACTN1-212ENST00000554158 SBF2Q86WG5 1849 aa11.8□□□□□ -0.52
ACTN1-212ENST00000554158 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-212ENST00000554158 QRICH2Q9H0J4 1663 aa11.79□□□□□ -0.52
ACTN1-212ENST00000554158 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
ACTN1-212ENST00000554158 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
ACTN1-212ENST00000554158 CAMTA1Q9Y6Y1 1673 aa11.78□□□□□ -0.52
ACTN1-212ENST00000554158 RGPD3A6NKT7 1758 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-212ENST00000554158 RGPD4Q7Z3J3 1758 aa11.78□□□□□ -0.52
ACTN1-212ENST00000554158 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
ACTN1-212ENST00000554158 CPDO75976 1380 aa11.78□□□□□ -0.52
ACTN1-212ENST00000554158 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.52
ACTN1-212ENST00000554158 WNK3Q9BYP7 1800 aa11.77□□□□□ -0.52
ACTN1-212ENST00000554158 OVOS2A0A0G2JMS6 1433 aa11.77□□□□□ -0.53
ACTN1-212ENST00000554158 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.53
ACTN1-212ENST00000554158 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms