RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 SPATA31A5Q5VU36 1347 aa17.09■□□□□ 0.33
TUBB3-204ENST00000554116 SPATA31A7Q8IWB4 1347 aa17.09■□□□□ 0.33
TUBB3-204ENST00000554116 ARHGEF28Q8N1W1 1705 aaKnown RBP17.09■□□□□ 0.33
TUBB3-204ENST00000554116 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
TUBB3-204ENST00000554116 TNS1Q9HBL0 1735 aaKnown RBP17.07■□□□□ 0.32
TUBB3-204ENST00000554116 ATP7BP35670 1465 aa17.07■□□□□ 0.32
TUBB3-204ENST00000554116 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-204ENST00000554116 BAG6P46379 1132 aa17.07■□□□□ 0.32
TUBB3-204ENST00000554116 GPRASP1Q5JY77 1395 aa17.06■□□□□ 0.32
TUBB3-204ENST00000554116 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
TUBB3-204ENST00000554116 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
TUBB3-204ENST00000554116 HRCP23327 699 aa17.05■□□□□ 0.32
TUBB3-204ENST00000554116 EN1Q05925 392 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-204ENST00000554116 PHRF1Q9P1Y6 1649 aaKnown RBP17.05■□□□□ 0.32
TUBB3-204ENST00000554116 A0A0G2JS52 829 aa17.03■□□□□ 0.32
TUBB3-204ENST00000554116 MYT1Q01538 1121 aa17.03■□□□□ 0.32
TUBB3-204ENST00000554116 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
TUBB3-204ENST00000554116 NUDT16Q96DE0 195 aaKnown RBP17.03■□□□□ 0.32
TUBB3-204ENST00000554116 TOPAZ1Q8N9V7 1692 aa17.03■□□□□ 0.32
TUBB3-204ENST00000554116 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
TUBB3-204ENST00000554116 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
TUBB3-204ENST00000554116 KIAA0232Q92628 1395 aa17.02■□□□□ 0.32
TUBB3-204ENST00000554116 SPATA31A1Q5TZJ5 1347 aa17.02■□□□□ 0.32
TUBB3-204ENST00000554116 ITSN1Q15811 1721 aa17.02■□□□□ 0.32
TUBB3-204ENST00000554116 CHRNA2Q15822 529 aa17.02■□□□□ 0.32
TUBB3-204ENST00000554116 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-204ENST00000554116 PRDM11Q9NQV5 511 aa17■□□□□ 0.31
TUBB3-204ENST00000554116 POLR3AO14802 1390 aaPredicted RBP17■□□□□ 0.31
TUBB3-204ENST00000554116 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
TUBB3-204ENST00000554116 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
TUBB3-204ENST00000554116 CAMTA1Q9Y6Y1 1673 aa16.98■□□□□ 0.31
TUBB3-204ENST00000554116 ZC3H6P61129 1189 aaKnown RBP16.98■□□□□ 0.31
TUBB3-204ENST00000554116 NUTM2GQ5VZR2 741 aa16.98■□□□□ 0.31
TUBB3-204ENST00000554116 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
TUBB3-204ENST00000554116 CDK19Q9BWU1 502 aa16.98■□□□□ 0.31
TUBB3-204ENST00000554116 LMO7Q8WWI1 1683 aa16.97■□□□□ 0.31
TUBB3-204ENST00000554116 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
TUBB3-204ENST00000554116 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
TUBB3-204ENST00000554116 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
TUBB3-204ENST00000554116 ACEP12821 1306 aa16.96■□□□□ 0.31
TUBB3-204ENST00000554116 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
TUBB3-204ENST00000554116 TRIM37O94972 964 aa16.95■□□□□ 0.3
TUBB3-204ENST00000554116 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
TUBB3-204ENST00000554116 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
TUBB3-204ENST00000554116 SSH2Q76I76 1423 aa16.95■□□□□ 0.3
TUBB3-204ENST00000554116 KIAA1210Q9ULL0 1709 aa16.94■□□□□ 0.3
TUBB3-204ENST00000554116 RREB1Q92766 1687 aa16.94■□□□□ 0.3
TUBB3-204ENST00000554116 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
TUBB3-204ENST00000554116 USP19O94966 1318 aa16.93■□□□□ 0.3
TUBB3-204ENST00000554116 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
TUBB3-204ENST00000554116 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
TUBB3-204ENST00000554116 BARGINQ6ZT62 677 aa16.92■□□□□ 0.3
TUBB3-204ENST00000554116 CPDO75976 1380 aa16.91■□□□□ 0.3
TUBB3-204ENST00000554116 NUP188Q5SRE5 1749 aa16.91■□□□□ 0.3
TUBB3-204ENST00000554116 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
TUBB3-204ENST00000554116 UTRNP46939 3433 aa16.9■□□□□ 0.3
TUBB3-204ENST00000554116 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.3
TUBB3-204ENST00000554116 APBA3O96018 575 aa16.88■□□□□ 0.29
TUBB3-204ENST00000554116 ABTB2Q8N961 1025 aa16.88■□□□□ 0.29
TUBB3-204ENST00000554116 PEAK1Q9H792 1746 aa16.87■□□□□ 0.29
TUBB3-204ENST00000554116 PARP4Q9UKK3 1724 aaKnown RBP16.87■□□□□ 0.29
TUBB3-204ENST00000554116 GCP02774 474 aa16.87■□□□□ 0.29
TUBB3-204ENST00000554116 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
TUBB3-204ENST00000554116 TCP11L2Q8N4U5 519 aa16.86■□□□□ 0.29
TUBB3-204ENST00000554116 CABP2Q9NPB3 220 aa16.86■□□□□ 0.29
TUBB3-204ENST00000554116 COL18A1P39060 1754 aa16.86■□□□□ 0.29
TUBB3-204ENST00000554116 PPIP5K1Q6PFW1 1433 aa16.86■□□□□ 0.29
TUBB3-204ENST00000554116 SBF2Q86WG5 1849 aa16.85■□□□□ 0.29
TUBB3-204ENST00000554116 EVA1CP58658 441 aa16.85■□□□□ 0.29
TUBB3-204ENST00000554116 SLIT3O75094 1523 aa16.83■□□□□ 0.28
TUBB3-204ENST00000554116 YY1P25490 414 aa16.83■□□□□ 0.28
TUBB3-204ENST00000554116 PDE3BQ13370 1112 aa16.83■□□□□ 0.28
TUBB3-204ENST00000554116 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
TUBB3-204ENST00000554116 QRICH2Q9H0J4 1663 aa16.82■□□□□ 0.28
TUBB3-204ENST00000554116 PTF1AQ7RTS3 328 aa16.82■□□□□ 0.28
TUBB3-204ENST00000554116 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
TUBB3-204ENST00000554116 THRAP3Q9Y2W1 955 aaKnown RBP16.82■□□□□ 0.28
TUBB3-204ENST00000554116 USP6P35125 1406 aa16.81■□□□□ 0.28
TUBB3-204ENST00000554116 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-204ENST00000554116 CABP1Q9NZU7 370 aa16.81■□□□□ 0.28
TUBB3-204ENST00000554116 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
TUBB3-204ENST00000554116 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
TUBB3-204ENST00000554116 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
TUBB3-204ENST00000554116 CRB1P82279 1406 aa16.79■□□□□ 0.28
TUBB3-204ENST00000554116 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
TUBB3-204ENST00000554116 RGPD5Q99666 1765 aa16.79■□□□□ 0.28
TUBB3-204ENST00000554116 BRD4O60885 1362 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-204ENST00000554116 WNK3Q9BYP7 1800 aa16.78■□□□□ 0.28
TUBB3-204ENST00000554116 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
TUBB3-204ENST00000554116 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.28
TUBB3-204ENST00000554116 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.28
TUBB3-204ENST00000554116 NLRP6P59044 892 aa16.77■□□□□ 0.28
TUBB3-204ENST00000554116 PROM2Q8N271 834 aa16.77■□□□□ 0.28
TUBB3-204ENST00000554116 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
TUBB3-204ENST00000554116 ANO8Q9HCE9 1232 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-204ENST00000554116 NINLQ9Y2I6 1382 aa16.76■□□□□ 0.27
TUBB3-204ENST00000554116 CASZ1Q86V15 1759 aa16.75■□□□□ 0.27
TUBB3-204ENST00000554116 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
TUBB3-204ENST00000554116 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-204ENST00000554116 PPP1R1BQ9UD71 204 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms