RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
SIX4-202ENST00000554079 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
SIX4-202ENST00000554079 GPT2Q8TD30 523 aa11.72□□□□□ -0.53
SIX4-202ENST00000554079 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
SIX4-202ENST00000554079 K7ELQ4 463 aaPredicted RBP11.71□□□□□ -0.53
SIX4-202ENST00000554079 CYP2E1P05181 493 aaPredicted RBP11.71□□□□□ -0.53
SIX4-202ENST00000554079 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.53
SIX4-202ENST00000554079 SYCP1Q15431 976 aa11.71□□□□□ -0.53
SIX4-202ENST00000554079 C17orf53Q8N3J3 647 aaPredicted RBP11.71□□□□□ -0.53
SIX4-202ENST00000554079 CFAP65Q6ZU64 1925 aaKnown RBP11.71□□□□□ -0.53
SIX4-202ENST00000554079 CC2D1BQ5T0F9 858 aaKnown RBP11.7□□□□□ -0.54
SIX4-202ENST00000554079 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
SIX4-202ENST00000554079 KIAA0586Q9BVV6 1533 aa11.7□□□□□ -0.54
SIX4-202ENST00000554079 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
SIX4-202ENST00000554079 AXDND1Q5T1B0 1012 aaPredicted RBP11.7□□□□□ -0.54
SIX4-202ENST00000554079 CNPY4Q8N129 248 aa11.7□□□□□ -0.54
SIX4-202ENST00000554079 DIAPH3Q9NSV4 1193 aa11.7□□□□□ -0.54
SIX4-202ENST00000554079 TMEM63CQ9P1W3 806 aa11.7□□□□□ -0.54
SIX4-202ENST00000554079 LAMC1P11047 1609 aa11.7□□□□□ -0.54
SIX4-202ENST00000554079 CFAP74Q9C0B2 1584 aa11.7□□□□□ -0.54
SIX4-202ENST00000554079 ADGBQ8N7X0 1667 aa11.69□□□□□ -0.54
SIX4-202ENST00000554079 FAM193AP78312 1265 aa11.69□□□□□ -0.54
SIX4-202ENST00000554079 ZNF622Q969S3 477 aaKnown RBP eCLIP11.69□□□□□ -0.54
SIX4-202ENST00000554079 MLECQ14165 292 aa11.69□□□□□ -0.54
SIX4-202ENST00000554079 RWDD1Q9H446 243 aaPredicted RBP11.69□□□□□ -0.54
SIX4-202ENST00000554079 GRIN2AQ12879 1464 aa11.68□□□□□ -0.54
SIX4-202ENST00000554079 SYCE3A1L190 88 aa11.68□□□□□ -0.54
SIX4-202ENST00000554079 NOP2P46087 812 aaKnown RBP11.68□□□□□ -0.54
SIX4-202ENST00000554079 CREBRFQ8IUR6 639 aa11.68□□□□□ -0.54
SIX4-202ENST00000554079 FAM53CQ9NYF3 392 aa11.68□□□□□ -0.54
SIX4-202ENST00000554079 DAPK1P53355 1430 aa11.68□□□□□ -0.54
SIX4-202ENST00000554079 KDM5DQ9BY66 1539 aa11.68□□□□□ -0.54
SIX4-202ENST00000554079 UHRF1BP1LA0JNW5 1464 aa11.67□□□□□ -0.54
SIX4-202ENST00000554079 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
SIX4-202ENST00000554079 PHF23Q9BUL5 403 aaPredicted RBP11.67□□□□□ -0.54
SIX4-202ENST00000554079 KIF18AQ8NI77 898 aa11.67□□□□□ -0.54
SIX4-202ENST00000554079 ERICH4A6NGS2 130 aa11.66□□□□□ -0.54
SIX4-202ENST00000554079 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
SIX4-202ENST00000554079 RNF214Q8ND24 703 aa11.66□□□□□ -0.54
SIX4-202ENST00000554079 LOC102724159A0A0B4J2E5 919 aa11.65□□□□□ -0.54
SIX4-202ENST00000554079 RLBP1P12271 317 aa11.65□□□□□ -0.54
SIX4-202ENST00000554079 PWP2Q15269 919 aaKnown RBP11.65□□□□□ -0.54
SIX4-202ENST00000554079 KRT222Q8N1A0 295 aa11.65□□□□□ -0.54
SIX4-202ENST00000554079 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.54
SIX4-202ENST00000554079 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
SIX4-202ENST00000554079 NUCB2P80303 420 aa11.65□□□□□ -0.54
SIX4-202ENST00000554079 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.54
SIX4-202ENST00000554079 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
SIX4-202ENST00000554079 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
SIX4-202ENST00000554079 ADAMTS12P58397 1594 aa11.65□□□□□ -0.55
SIX4-202ENST00000554079 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
SIX4-202ENST00000554079 CHAF1AQ13111 956 aaPredicted RBP11.64□□□□□ -0.55
SIX4-202ENST00000554079 TRERF1Q96PN7 1200 aa11.64□□□□□ -0.55
SIX4-202ENST00000554079 NSFL1CQ9UNZ2 370 aaKnown RBP11.64□□□□□ -0.55
SIX4-202ENST00000554079 TNNQ9UQP3 1299 aa11.64□□□□□ -0.55
SIX4-202ENST00000554079 PRPF40AO75400 957 aaKnown RBP11.64□□□□□ -0.55
SIX4-202ENST00000554079 APPP05067 770 aa11.64□□□□□ -0.55
SIX4-202ENST00000554079 KIAA1524Q8TCG1 905 aa11.64□□□□□ -0.55
SIX4-202ENST00000554079 TSPY26PQ9H489 355 aa11.64□□□□□ -0.55
SIX4-202ENST00000554079 PRDM15P57071 1507 aaPredicted RBP11.63□□□□□ -0.55
SIX4-202ENST00000554079 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
SIX4-202ENST00000554079 YEATS2Q9ULM3 1422 aa11.63□□□□□ -0.55
SIX4-202ENST00000554079 CYP2C19P33261 490 aa11.63□□□□□ -0.55
SIX4-202ENST00000554079 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
SIX4-202ENST00000554079 MPNDQ8N594 471 aa11.63□□□□□ -0.55
SIX4-202ENST00000554079 DISP3Q9P2K9 1392 aa11.62□□□□□ -0.55
SIX4-202ENST00000554079 PPP2R1AP30153 589 aa11.62□□□□□ -0.55
SIX4-202ENST00000554079 RSPH14Q9UHP6 348 aa11.62□□□□□ -0.55
SIX4-202ENST00000554079 ABCC5O15440 1437 aa11.62□□□□□ -0.55
SIX4-202ENST00000554079 CUL7Q14999 1698 aa11.62□□□□□ -0.55
SIX4-202ENST00000554079 DHX16O60231 1041 aaKnown RBP11.62□□□□□ -0.55
SIX4-202ENST00000554079 PKP1Q13835 747 aa11.62□□□□□ -0.55
SIX4-202ENST00000554079 UVSSAQ2YD98 709 aa11.62□□□□□ -0.55
SIX4-202ENST00000554079 CDCA8Q53HL2 280 aa11.62□□□□□ -0.55
SIX4-202ENST00000554079 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
SIX4-202ENST00000554079 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
SIX4-202ENST00000554079 NFATC2IPQ8NCF5 419 aa11.6□□□□□ -0.55
SIX4-202ENST00000554079 MYCBPQ99417 103 aaPredicted RBP11.6□□□□□ -0.55
SIX4-202ENST00000554079 NCAPGQ9BPX3 1015 aa11.6□□□□□ -0.55
SIX4-202ENST00000554079 PYCARDQ9ULZ3 195 aa11.6□□□□□ -0.55
SIX4-202ENST00000554079 CROCC2H7BZ55 1655 aa11.6□□□□□ -0.55
SIX4-202ENST00000554079 SYNMO15061 1565 aa11.6□□□□□ -0.55
SIX4-202ENST00000554079 GTF2A1P52655 376 aaPredicted RBP11.6□□□□□ -0.55
SIX4-202ENST00000554079 CARD10Q9BWT7 1032 aa11.6□□□□□ -0.55
SIX4-202ENST00000554079 KCNF1Q9H3M0 494 aa11.6□□□□□ -0.55
SIX4-202ENST00000554079 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
SIX4-202ENST00000554079 APAF1O14727 1248 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 REC8O95072 547 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 MBD3O95983 291 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 RARSP54136 660 aaKnown RBP11.59□□□□□ -0.55
SIX4-202ENST00000554079 CTR9Q6PD62 1173 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 ZDHHC9Q9Y397 364 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 HDAC1Q13547 482 aaPredicted RBP11.59□□□□□ -0.55
SIX4-202ENST00000554079 ICE2Q659A1 982 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 CNKSR2Q8WXI2 1034 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 RASSF4Q9H2L5 321 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 USP25Q9UHP3 1055 aa11.59□□□□□ -0.55
SIX4-202ENST00000554079 RIMBP3CA6NJZ7 1639 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms