RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 ALS2Q96Q42 1657 aa10.1□□□□□ -0.79
MTHFD1-205ENST00000554057 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-205ENST00000554057 FAM98CQ17RN3 349 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-205ENST00000554057 COL14A1Q05707 1796 aaKnown RBP10.09□□□□□ -0.79
MTHFD1-205ENST00000554057 FAM83GA6ND36 823 aa10.09□□□□□ -0.79
MTHFD1-205ENST00000554057 ONECUT3O60422 494 aaPredicted RBP10.09□□□□□ -0.79
MTHFD1-205ENST00000554057 HIRIP3Q9BW71 556 aaPredicted RBP10.09□□□□□ -0.79
MTHFD1-205ENST00000554057 POGKQ9P215 609 aa10.09□□□□□ -0.79
MTHFD1-205ENST00000554057 CRYBG1Q9Y4K1 1723 aa10.09□□□□□ -0.79
MTHFD1-205ENST00000554057 ADGRB1O14514 1584 aa10.09□□□□□ -0.79
MTHFD1-205ENST00000554057 PRR36Q9H6K5 1346 aa10.08□□□□□ -0.8
MTHFD1-205ENST00000554057 BAG6P46379 1132 aa10.08□□□□□ -0.8
MTHFD1-205ENST00000554057 BTG4Q9NY30 223 aa10.08□□□□□ -0.8
MTHFD1-205ENST00000554057 TULP4Q9NRJ4 1543 aa10.07□□□□□ -0.8
MTHFD1-205ENST00000554057 RGPD1P0DJD0 1748 aa10.07□□□□□ -0.8
MTHFD1-205ENST00000554057 THSD7AQ9UPZ6 1657 aa10.07□□□□□ -0.8
MTHFD1-205ENST00000554057 FAM182BQ5T319 152 aa10.07□□□□□ -0.8
MTHFD1-205ENST00000554057 TNS1Q9HBL0 1735 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-205ENST00000554057 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-205ENST00000554057 GPRASP1Q5JY77 1395 aa10.06□□□□□ -0.8
MTHFD1-205ENST00000554057 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
MTHFD1-205ENST00000554057 TRAK1Q9UPV9 953 aa10.06□□□□□ -0.8
MTHFD1-205ENST00000554057 ARHGEF28Q8N1W1 1705 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-205ENST00000554057 EIF3AQ14152 1382 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-205ENST00000554057 SPATA31A5Q5VU36 1347 aa10.05□□□□□ -0.8
MTHFD1-205ENST00000554057 SPATA31A7Q8IWB4 1347 aa10.05□□□□□ -0.8
MTHFD1-205ENST00000554057 PRDM11Q9NQV5 511 aa10.04□□□□□ -0.8
MTHFD1-205ENST00000554057 ATP7BP35670 1465 aa10.04□□□□□ -0.8
MTHFD1-205ENST00000554057 PHRF1Q9P1Y6 1649 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-205ENST00000554057 DISP2A7MBM2 1401 aa10.03□□□□□ -0.8
MTHFD1-205ENST00000554057 WASLO00401 505 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-205ENST00000554057 PAK3O75914 559 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-205ENST00000554057 R3HDM1Q15032 1099 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-205ENST00000554057 NGDNQ8NEJ9 315 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-205ENST00000554057 KIAA0232Q92628 1395 aa10.02□□□□□ -0.8
MTHFD1-205ENST00000554057 ITSN1Q15811 1721 aa10.02□□□□□ -0.8
MTHFD1-205ENST00000554057 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
MTHFD1-205ENST00000554057 SUPT16HQ9Y5B9 1047 aaKnown RBP10.02□□□□□ -0.81
MTHFD1-205ENST00000554057 TOPAZ1Q8N9V7 1692 aa10.02□□□□□ -0.81
MTHFD1-205ENST00000554057 CHRNA2Q15822 529 aa10.01□□□□□ -0.81
MTHFD1-205ENST00000554057 EZH2Q15910 746 aaKnown RBP10.01□□□□□ -0.81
MTHFD1-205ENST00000554057 STRN4Q9NRL3 753 aa10.01□□□□□ -0.81
MTHFD1-205ENST00000554057 CCER2I3L3R5 266 aa10□□□□□ -0.81
MTHFD1-205ENST00000554057 NUTM2GQ5VZR2 741 aa10□□□□□ -0.81
MTHFD1-205ENST00000554057 SPATA31A1Q5TZJ5 1347 aa10□□□□□ -0.81
MTHFD1-205ENST00000554057 NRKQ7Z2Y5 1582 aa10□□□□□ -0.81
MTHFD1-205ENST00000554057 TRIM37O94972 964 aa9.99□□□□□ -0.81
MTHFD1-205ENST00000554057 DCAF11Q8TEB1 546 aa9.99□□□□□ -0.81
MTHFD1-205ENST00000554057 NUDT16Q96DE0 195 aaKnown RBP9.99□□□□□ -0.81
MTHFD1-205ENST00000554057 SSH2Q76I76 1423 aa9.99□□□□□ -0.81
MTHFD1-205ENST00000554057 ZC3H6P61129 1189 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-205ENST00000554057 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
MTHFD1-205ENST00000554057 RREB1Q92766 1687 aa9.98□□□□□ -0.81
MTHFD1-205ENST00000554057 NUP188Q5SRE5 1749 aa9.97□□□□□ -0.81
MTHFD1-205ENST00000554057 KIAA1210Q9ULL0 1709 aa9.97□□□□□ -0.81
MTHFD1-205ENST00000554057 FAM196AQ6ZSG2 479 aa9.97□□□□□ -0.81
MTHFD1-205ENST00000554057 CAMKK2Q96RR4 588 aa9.97□□□□□ -0.81
MTHFD1-205ENST00000554057 LMO7Q8WWI1 1683 aa9.96□□□□□ -0.81
MTHFD1-205ENST00000554057 APBA3O96018 575 aa9.96□□□□□ -0.82
MTHFD1-205ENST00000554057 ACEP12821 1306 aa9.96□□□□□ -0.82
MTHFD1-205ENST00000554057 CAMTA1Q9Y6Y1 1673 aa9.96□□□□□ -0.82
MTHFD1-205ENST00000554057 CDK19Q9BWU1 502 aa9.95□□□□□ -0.82
MTHFD1-205ENST00000554057 POLR3AO14802 1390 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-205ENST00000554057 PARD3Q8TEW0 1356 aa9.95□□□□□ -0.82
MTHFD1-205ENST00000554057 USP19O94966 1318 aa9.94□□□□□ -0.82
MTHFD1-205ENST00000554057 EVA1CP58658 441 aa9.94□□□□□ -0.82
MTHFD1-205ENST00000554057 PDE3BQ13370 1112 aa9.94□□□□□ -0.82
MTHFD1-205ENST00000554057 LARP1Q6PKG0 1096 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-205ENST00000554057 CPDO75976 1380 aa9.93□□□□□ -0.82
MTHFD1-205ENST00000554057 NBPF8Q3BBV2 869 aa9.93□□□□□ -0.82
MTHFD1-205ENST00000554057 BARGINQ6ZT62 677 aa9.93□□□□□ -0.82
MTHFD1-205ENST00000554057 PARP4Q9UKK3 1724 aaKnown RBP9.93□□□□□ -0.82
MTHFD1-205ENST00000554057 COL5A2P05997 1499 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-205ENST00000554057 TONSLQ96HA7 1378 aa9.92□□□□□ -0.82
MTHFD1-205ENST00000554057 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
MTHFD1-205ENST00000554057 ABTB2Q8N961 1025 aa9.92□□□□□ -0.82
MTHFD1-205ENST00000554057 SIN3AQ96ST3 1273 aa9.92□□□□□ -0.82
MTHFD1-205ENST00000554057 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
MTHFD1-205ENST00000554057 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
MTHFD1-205ENST00000554057 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
MTHFD1-205ENST00000554057 ANP32CO43423 234 aa9.91□□□□□ -0.82
MTHFD1-205ENST00000554057 DDX10Q13206 875 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-205ENST00000554057 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
MTHFD1-205ENST00000554057 LRRC37A3O60309 1634 aa9.91□□□□□ -0.82
MTHFD1-205ENST00000554057 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
MTHFD1-205ENST00000554057 PPIP5K1Q6PFW1 1433 aa9.9□□□□□ -0.82
MTHFD1-205ENST00000554057 PEAK1Q9H792 1746 aa9.9□□□□□ -0.82
MTHFD1-205ENST00000554057 QRICH2Q9H0J4 1663 aa9.9□□□□□ -0.82
MTHFD1-205ENST00000554057 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
MTHFD1-205ENST00000554057 OVOS2A0A0G2JMS6 1433 aa9.9□□□□□ -0.83
MTHFD1-205ENST00000554057 OVOS2A0A0J9YW53 1432 aa9.9□□□□□ -0.83
MTHFD1-205ENST00000554057 OVOS2Q6IE36 1432 aa9.9□□□□□ -0.83
MTHFD1-205ENST00000554057 GCP02774 474 aa9.89□□□□□ -0.83
MTHFD1-205ENST00000554057 SRPK2P78362 688 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-205ENST00000554057 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
MTHFD1-205ENST00000554057 PPP1R1BQ9UD71 204 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-205ENST00000554057 CRB1P82279 1406 aa9.89□□□□□ -0.83
MTHFD1-205ENST00000554057 YY1P25490 414 aa9.88□□□□□ -0.83
MTHFD1-205ENST00000554057 NLRP13Q86W25 1043 aa9.88□□□□□ -0.83
MTHFD1-205ENST00000554057 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms