RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 BRD4O60885 1362 aaPredicted RBP14.14□□□□□ -0.15
TMEM55B-205ENST00000554028 FMN2Q9NZ56 1722 aa14.14□□□□□ -0.15
TMEM55B-205ENST00000554028 STRCP1A6NGW2 1772 aa14.14□□□□□ -0.15
TMEM55B-205ENST00000554028 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
TMEM55B-205ENST00000554028 FYB1O15117 783 aa14.13□□□□□ -0.15
TMEM55B-205ENST00000554028 ORAI2Q96SN7 254 aa14.13□□□□□ -0.15
TMEM55B-205ENST00000554028 SLAIN2Q9P270 581 aa14.13□□□□□ -0.15
TMEM55B-205ENST00000554028 TTC21AQ8NDW8 1320 aa14.13□□□□□ -0.15
TMEM55B-205ENST00000554028 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
TMEM55B-205ENST00000554028 NLRP13Q86W25 1043 aa14.12□□□□□ -0.15
TMEM55B-205ENST00000554028 COG3Q96JB2 828 aa14.12□□□□□ -0.15
TMEM55B-205ENST00000554028 GGNBP2Q9H3C7 697 aa14.12□□□□□ -0.15
TMEM55B-205ENST00000554028 USP6P35125 1406 aa14.12□□□□□ -0.15
TMEM55B-205ENST00000554028 ITSN1Q15811 1721 aa14.12□□□□□ -0.15
TMEM55B-205ENST00000554028 TTC21BQ7Z4L5 1316 aa14.12□□□□□ -0.15
TMEM55B-205ENST00000554028 FOXO3O43524 673 aa14.11□□□□□ -0.15
TMEM55B-205ENST00000554028 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
TMEM55B-205ENST00000554028 MRS2Q9HD23 443 aa14.11□□□□□ -0.15
TMEM55B-205ENST00000554028 MST1RQ04912 1400 aa14.1□□□□□ -0.15
TMEM55B-205ENST00000554028 USP32Q8NFA0 1604 aa14.1□□□□□ -0.15
TMEM55B-205ENST00000554028 TOPAZ1Q8N9V7 1692 aa14.1□□□□□ -0.15
TMEM55B-205ENST00000554028 PPP2R1AP30153 589 aa14.09□□□□□ -0.15
TMEM55B-205ENST00000554028 KRT28Q7Z3Y7 464 aa14.09□□□□□ -0.15
TMEM55B-205ENST00000554028 NPHP3Q7Z494 1330 aa14.09□□□□□ -0.15
TMEM55B-205ENST00000554028 DSG3P32926 999 aa14.08□□□□□ -0.16
TMEM55B-205ENST00000554028 TNNT2P45379 298 aaPredicted RBP14.08□□□□□ -0.16
TMEM55B-205ENST00000554028 NME9Q86XW9 330 aa14.08□□□□□ -0.16
TMEM55B-205ENST00000554028 TOM1O60784 492 aa14.07□□□□□ -0.16
TMEM55B-205ENST00000554028 ABTB2Q8N961 1025 aa14.07□□□□□ -0.16
TMEM55B-205ENST00000554028 LTBP4Q8N2S1 1624 aa14.06□□□□□ -0.16
TMEM55B-205ENST00000554028 NLRP6P59044 892 aa14.06□□□□□ -0.16
TMEM55B-205ENST00000554028 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
TMEM55B-205ENST00000554028 CAPN15O75808 1086 aa14.05□□□□□ -0.16
TMEM55B-205ENST00000554028 LMOD2Q6P5Q4 547 aa14.05□□□□□ -0.16
TMEM55B-205ENST00000554028 BRINP3Q76B58 766 aa14.05□□□□□ -0.16
TMEM55B-205ENST00000554028 SSH2Q76I76 1423 aa14.05□□□□□ -0.16
TMEM55B-205ENST00000554028 KIF1AQ12756 1690 aa14.04□□□□□ -0.16
TMEM55B-205ENST00000554028 XPCQ01831 940 aaPredicted RBP14.03□□□□□ -0.16
TMEM55B-205ENST00000554028 MON2Q7Z3U7 1717 aa14.03□□□□□ -0.16
TMEM55B-205ENST00000554028 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
TMEM55B-205ENST00000554028 AKAP12Q02952 1782 aa14.03□□□□□ -0.16
TMEM55B-205ENST00000554028 USP31Q70CQ4 1352 aa14.02□□□□□ -0.17
TMEM55B-205ENST00000554028 MTHFSP49914 203 aa14.02□□□□□ -0.17
TMEM55B-205ENST00000554028 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.17
TMEM55B-205ENST00000554028 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
TMEM55B-205ENST00000554028 XIRP1Q702N8 1843 aaKnown RBP14.01□□□□□ -0.17
TMEM55B-205ENST00000554028 WDR43Q15061 677 aaKnown RBP eCLIP14.01□□□□□ -0.17
TMEM55B-205ENST00000554028 CCDC184Q52MB2 194 aa14.01□□□□□ -0.17
TMEM55B-205ENST00000554028 FAM9BQ8IZU0 186 aa14.01□□□□□ -0.17
TMEM55B-205ENST00000554028 KCNH5Q8NCM2 988 aa14.01□□□□□ -0.17
TMEM55B-205ENST00000554028 SBNO1A3KN83 1393 aa14□□□□□ -0.17
TMEM55B-205ENST00000554028 NUTM2GQ5VZR2 741 aa14□□□□□ -0.17
TMEM55B-205ENST00000554028 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
TMEM55B-205ENST00000554028 AATKQ6ZMQ8 1374 aa13.99□□□□□ -0.17
TMEM55B-205ENST00000554028 UBAP1LF5GYI3 381 aa13.99□□□□□ -0.17
TMEM55B-205ENST00000554028 PPM1GO15355 546 aaPredicted RBP13.99□□□□□ -0.17
TMEM55B-205ENST00000554028 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
TMEM55B-205ENST00000554028 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
TMEM55B-205ENST00000554028 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
TMEM55B-205ENST00000554028 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
TMEM55B-205ENST00000554028 SOCS7O14512 581 aa13.98□□□□□ -0.17
TMEM55B-205ENST00000554028 SOX12O15370 315 aa13.98□□□□□ -0.17
TMEM55B-205ENST00000554028 ILDR2Q71H61 639 aa13.98□□□□□ -0.17
TMEM55B-205ENST00000554028 POLKQ9UBT6 870 aa13.98□□□□□ -0.17
TMEM55B-205ENST00000554028 OVOS2A0A0J9YW53 1432 aa13.98□□□□□ -0.17
TMEM55B-205ENST00000554028 OVOS2Q6IE36 1432 aa13.98□□□□□ -0.17
TMEM55B-205ENST00000554028 ARHGEF10O15013 1369 aa13.97□□□□□ -0.17
TMEM55B-205ENST00000554028 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
TMEM55B-205ENST00000554028 NRKQ7Z2Y5 1582 aa13.97□□□□□ -0.17
TMEM55B-205ENST00000554028 YTHDC1Q96MU7 727 aaKnown RBP13.97□□□□□ -0.17
TMEM55B-205ENST00000554028 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
TMEM55B-205ENST00000554028 SOS2Q07890 1332 aaPredicted RBP13.96□□□□□ -0.17
TMEM55B-205ENST00000554028 SPATA31A3Q5VYP0 1347 aa13.96□□□□□ -0.17
TMEM55B-205ENST00000554028 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
TMEM55B-205ENST00000554028 AMPHP49418 695 aa13.95□□□□□ -0.18
TMEM55B-205ENST00000554028 LRRC59Q96AG4 307 aaKnown RBP13.95□□□□□ -0.18
TMEM55B-205ENST00000554028 TNS3Q68CZ2 1445 aa13.95□□□□□ -0.18
TMEM55B-205ENST00000554028 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
TMEM55B-205ENST00000554028 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
TMEM55B-205ENST00000554028 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
TMEM55B-205ENST00000554028 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
TMEM55B-205ENST00000554028 GCP02774 474 aa13.94□□□□□ -0.18
TMEM55B-205ENST00000554028 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
TMEM55B-205ENST00000554028 RRS1Q15050 365 aaKnown RBP13.94□□□□□ -0.18
TMEM55B-205ENST00000554028 FBLN1P23142 703 aa13.93□□□□□ -0.18
TMEM55B-205ENST00000554028 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
TMEM55B-205ENST00000554028 EMILIN1Q9Y6C2 1016 aa13.93□□□□□ -0.18
TMEM55B-205ENST00000554028 PXDNQ92626 1479 aa13.93□□□□□ -0.18
TMEM55B-205ENST00000554028 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
TMEM55B-205ENST00000554028 USP19O94966 1318 aa13.91□□□□□ -0.18
TMEM55B-205ENST00000554028 MAP3K19Q56UN5 1328 aa13.91□□□□□ -0.18
TMEM55B-205ENST00000554028 ZBTB7CA1YPR0 619 aa13.91□□□□□ -0.18
TMEM55B-205ENST00000554028 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
TMEM55B-205ENST00000554028 INSRP06213 1382 aa13.91□□□□□ -0.18
TMEM55B-205ENST00000554028 PIK3C2AO00443 1686 aa13.91□□□□□ -0.18
TMEM55B-205ENST00000554028 U2AF1L5P0DN76 240 aaPredicted RBP13.9□□□□□ -0.18
TMEM55B-205ENST00000554028 U2AF1Q01081 240 aaKnown RBP eCLIP13.9□□□□□ -0.18
TMEM55B-205ENST00000554028 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
TMEM55B-205ENST00000554028 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
TMEM55B-205ENST00000554028 FLT4P35916 1363 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms