RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 MMRN1Q13201 1228 aa10.11□□□□□ -0.79
FOXN3-206ENST00000554005 WASHC4Q2M389 1173 aa10.11□□□□□ -0.79
FOXN3-206ENST00000554005 VAC14Q08AM6 782 aa10.1□□□□□ -0.79
FOXN3-206ENST00000554005 PLSCR2Q9NRY7 297 aa10.1□□□□□ -0.79
FOXN3-206ENST00000554005 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
FOXN3-206ENST00000554005 CCDC82Q8N4S0 544 aa10.09□□□□□ -0.79
FOXN3-206ENST00000554005 ZC3H4Q9UPT8 1303 aaKnown RBP10.08□□□□□ -0.8
FOXN3-206ENST00000554005 PTCRAQ6ISU1 281 aaPredicted RBP10.08□□□□□ -0.8
FOXN3-206ENST00000554005 FCF1Q9Y324 198 aaKnown RBP10.08□□□□□ -0.8
FOXN3-206ENST00000554005 GLMNQ92990 594 aa10.07□□□□□ -0.8
FOXN3-206ENST00000554005 ARID3AQ99856 593 aa10.07□□□□□ -0.8
FOXN3-206ENST00000554005 UNC93B1Q9H1C4 597 aa10.07□□□□□ -0.8
FOXN3-206ENST00000554005 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
FOXN3-206ENST00000554005 ADAMTS19Q8TE59 1207 aa10.06□□□□□ -0.8
FOXN3-206ENST00000554005 FBXO45P0C2W1 286 aa10.05□□□□□ -0.8
FOXN3-206ENST00000554005 NR1H3Q13133 447 aa10.05□□□□□ -0.8
FOXN3-206ENST00000554005 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
FOXN3-206ENST00000554005 PPEF1O14829 653 aaPredicted RBP10.04□□□□□ -0.8
FOXN3-206ENST00000554005 NBPF14Q5TI25 921 aa10.04□□□□□ -0.8
FOXN3-206ENST00000554005 GPKOWQ92917 476 aaPredicted RBP eCLIP10.04□□□□□ -0.8
FOXN3-206ENST00000554005 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
FOXN3-206ENST00000554005 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
FOXN3-206ENST00000554005 HDGFL1Q5TGJ6 251 aa10.03□□□□□ -0.8
FOXN3-206ENST00000554005 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
FOXN3-206ENST00000554005 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
FOXN3-206ENST00000554005 SERPINA10Q9UK55 444 aa10.02□□□□□ -0.81
FOXN3-206ENST00000554005 SOX11P35716 441 aa10.01□□□□□ -0.81
FOXN3-206ENST00000554005 GGCXP38435 758 aa10.01□□□□□ -0.81
FOXN3-206ENST00000554005 OCSTAMPQ9BR26 566 aa10.01□□□□□ -0.81
FOXN3-206ENST00000554005 ALG2Q9H553 416 aa10.01□□□□□ -0.81
FOXN3-206ENST00000554005 GPSM3Q9Y4H4 160 aa10.01□□□□□ -0.81
FOXN3-206ENST00000554005 PTK2Q05397 1052 aa10□□□□□ -0.81
FOXN3-206ENST00000554005 PLA2G2CQ5R387 149 aa10□□□□□ -0.81
FOXN3-206ENST00000554005 PPP1R18Q6NYC8 613 aa10□□□□□ -0.81
FOXN3-206ENST00000554005 ANKLE1Q8NAG6 615 aa10□□□□□ -0.81
FOXN3-206ENST00000554005 EIF4G2P78344 907 aaKnown RBP eCLIP9.99□□□□□ -0.81
FOXN3-206ENST00000554005 SH3BP5LQ7L8J4 393 aa9.99□□□□□ -0.81
FOXN3-206ENST00000554005 BAP1Q92560 729 aa9.99□□□□□ -0.81
FOXN3-206ENST00000554005 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
FOXN3-206ENST00000554005 ARXQ96QS3 562 aa9.98□□□□□ -0.81
FOXN3-206ENST00000554005 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.98□□□□□ -0.81
FOXN3-206ENST00000554005 SEMA3FQ13275 785 aa9.97□□□□□ -0.81
FOXN3-206ENST00000554005 ZNF511Q8NB15 262 aa9.97□□□□□ -0.81
FOXN3-206ENST00000554005 ARHGAP9Q9BRR9 750 aa9.97□□□□□ -0.81
FOXN3-206ENST00000554005 SH3RF1Q7Z6J0 888 aa9.96□□□□□ -0.82
FOXN3-206ENST00000554005 ADAM32Q8TC27 787 aa9.96□□□□□ -0.82
FOXN3-206ENST00000554005 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
FOXN3-206ENST00000554005 FOXJ1Q92949 421 aa9.95□□□□□ -0.82
FOXN3-206ENST00000554005 UCN2Q96RP3 112 aa9.95□□□□□ -0.82
FOXN3-206ENST00000554005 ZBTB24O43167 697 aaPredicted RBP9.94□□□□□ -0.82
FOXN3-206ENST00000554005 SH3BP2P78314 561 aa9.94□□□□□ -0.82
FOXN3-206ENST00000554005 TRIM32Q13049 653 aa9.94□□□□□ -0.82
FOXN3-206ENST00000554005 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
FOXN3-206ENST00000554005 MAGEB6P1A0A0J9YX57 407 aa9.93□□□□□ -0.82
FOXN3-206ENST00000554005 C4orf48Q5BLP8 95 aa9.93□□□□□ -0.82
FOXN3-206ENST00000554005 ZBTB33Q86T24 672 aa9.93□□□□□ -0.82
FOXN3-206ENST00000554005 BPHLQ86WA6 291 aaPredicted RBP9.93□□□□□ -0.82
FOXN3-206ENST00000554005 PCDHB9Q9Y5E1 797 aa9.93□□□□□ -0.82
FOXN3-206ENST00000554005 AGERQ15109 404 aa9.92□□□□□ -0.82
FOXN3-206ENST00000554005 RPIAP49247 311 aa9.91□□□□□ -0.82
FOXN3-206ENST00000554005 PPP1R12CQ9BZL4 782 aa9.91□□□□□ -0.82
FOXN3-206ENST00000554005 SKOR1P84550 965 aa9.9□□□□□ -0.82
FOXN3-206ENST00000554005 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
FOXN3-206ENST00000554005 HOMEZQ8IX15 550 aa9.9□□□□□ -0.82
FOXN3-206ENST00000554005 EMID1Q96A84 441 aaPredicted RBP9.9□□□□□ -0.82
FOXN3-206ENST00000554005 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
FOXN3-206ENST00000554005 PALM3A6NDB9 673 aaPredicted RBP9.89□□□□□ -0.83
FOXN3-206ENST00000554005 MCCD1P59942 119 aaPredicted RBP9.89□□□□□ -0.83
FOXN3-206ENST00000554005 CFAP70Q5T0N1 1121 aa9.89□□□□□ -0.83
FOXN3-206ENST00000554005 ZNF592Q92610 1267 aa9.89□□□□□ -0.83
FOXN3-206ENST00000554005 PIK3CDO00329 1044 aa9.88□□□□□ -0.83
FOXN3-206ENST00000554005 WNT7BP56706 349 aa9.88□□□□□ -0.83
FOXN3-206ENST00000554005 LIAT1Q6ZQX7 453 aa9.88□□□□□ -0.83
FOXN3-206ENST00000554005 PLA2G2EQ9NZK7 142 aa9.88□□□□□ -0.83
FOXN3-206ENST00000554005 CEP126Q9P2H0 1117 aa9.88□□□□□ -0.83
FOXN3-206ENST00000554005 TBC1D9Q6ZT07 1266 aa9.87□□□□□ -0.83
FOXN3-206ENST00000554005 DZIP3Q86Y13 1208 aaKnown RBP9.87□□□□□ -0.83
FOXN3-206ENST00000554005 TFIP11Q9UBB9 837 aaKnown RBP9.87□□□□□ -0.83
FOXN3-206ENST00000554005 FAM174AQ8TBP5 190 aa9.86□□□□□ -0.83
FOXN3-206ENST00000554005 SLC10A4Q96EP9 437 aa9.86□□□□□ -0.83
FOXN3-206ENST00000554005 A0A0G2JS52 829 aa9.85□□□□□ -0.83
FOXN3-206ENST00000554005 ATP9BO43861 1147 aa9.85□□□□□ -0.83
FOXN3-206ENST00000554005 CD2BP2O95400 341 aaKnown RBP9.85□□□□□ -0.83
FOXN3-206ENST00000554005 TRMT44Q8IYL2 757 aaKnown RBP9.85□□□□□ -0.83
FOXN3-206ENST00000554005 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
FOXN3-206ENST00000554005 MAFBQ9Y5Q3 323 aaPredicted RBP9.85□□□□□ -0.83
FOXN3-206ENST00000554005 PHTF2Q8N3S3 785 aa9.84□□□□□ -0.83
FOXN3-206ENST00000554005 RFX1P22670 979 aa9.83□□□□□ -0.84
FOXN3-206ENST00000554005 VARSP26640 1264 aaKnown RBP9.83□□□□□ -0.84
FOXN3-206ENST00000554005 LMOD1P29536 600 aaPredicted RBP9.83□□□□□ -0.84
FOXN3-206ENST00000554005 SLC19A1P41440 591 aa9.83□□□□□ -0.84
FOXN3-206ENST00000554005 SLFNL1Q499Z3 407 aa9.83□□□□□ -0.84
FOXN3-206ENST00000554005 SKIP12755 728 aa9.82□□□□□ -0.84
FOXN3-206ENST00000554005 RC3H1Q5TC82 1133 aaKnown RBP9.82□□□□□ -0.84
FOXN3-206ENST00000554005 RNF135Q8IUD6 432 aa9.82□□□□□ -0.84
FOXN3-206ENST00000554005 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
FOXN3-206ENST00000554005 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.81□□□□□ -0.84
FOXN3-206ENST00000554005 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
FOXN3-206ENST00000554005 PPP1R15AO75807 674 aaPredicted RBP9.81□□□□□ -0.84
FOXN3-206ENST00000554005 SRPK2P78362 688 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms