RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 NGDNQ8NEJ9 315 aaKnown RBP13.1□□□□□ -0.31
SDR39U1-207ENST00000553937 NUDT16Q96DE0 195 aaKnown RBP13.1□□□□□ -0.31
SDR39U1-207ENST00000553937 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
SDR39U1-207ENST00000553937 NRKQ7Z2Y5 1582 aa13.08□□□□□ -0.32
SDR39U1-207ENST00000553937 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
SDR39U1-207ENST00000553937 L3MBTL2Q969R5 705 aa13.08□□□□□ -0.32
SDR39U1-207ENST00000553937 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
SDR39U1-207ENST00000553937 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
SDR39U1-207ENST00000553937 FAM83GA6ND36 823 aa13.07□□□□□ -0.32
SDR39U1-207ENST00000553937 VPS72Q15906 364 aa13.07□□□□□ -0.32
SDR39U1-207ENST00000553937 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
SDR39U1-207ENST00000553937 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
SDR39U1-207ENST00000553937 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
SDR39U1-207ENST00000553937 CCDC9Q9Y3X0 531 aaKnown RBP13.05□□□□□ -0.32
SDR39U1-207ENST00000553937 ACEP12821 1306 aa13.05□□□□□ -0.32
SDR39U1-207ENST00000553937 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
SDR39U1-207ENST00000553937 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
SDR39U1-207ENST00000553937 BTG4Q9NY30 223 aa13.04□□□□□ -0.32
SDR39U1-207ENST00000553937 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
SDR39U1-207ENST00000553937 LMO7Q8WWI1 1683 aa13.03□□□□□ -0.32
SDR39U1-207ENST00000553937 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
SDR39U1-207ENST00000553937 PIK3C2AO00443 1686 aa13.02□□□□□ -0.32
SDR39U1-207ENST00000553937 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.32
SDR39U1-207ENST00000553937 PLEKHG3A1L390 1219 aa13.02□□□□□ -0.33
SDR39U1-207ENST00000553937 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
SDR39U1-207ENST00000553937 NUTM2GQ5VZR2 741 aa13.02□□□□□ -0.33
SDR39U1-207ENST00000553937 SEPT12Q8IYM1 358 aa13.02□□□□□ -0.33
SDR39U1-207ENST00000553937 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
SDR39U1-207ENST00000553937 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.33
SDR39U1-207ENST00000553937 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
SDR39U1-207ENST00000553937 PRDM11Q9NQV5 511 aa13.01□□□□□ -0.33
SDR39U1-207ENST00000553937 MON2Q7Z3U7 1717 aa13□□□□□ -0.33
SDR39U1-207ENST00000553937 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
SDR39U1-207ENST00000553937 ONECUT3O60422 494 aaPredicted RBP13□□□□□ -0.33
SDR39U1-207ENST00000553937 RGPD5Q99666 1765 aa12.99□□□□□ -0.33
SDR39U1-207ENST00000553937 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
SDR39U1-207ENST00000553937 A0A0G2JS52 829 aa12.99□□□□□ -0.33
SDR39U1-207ENST00000553937 MYT1Q01538 1121 aa12.99□□□□□ -0.33
SDR39U1-207ENST00000553937 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
SDR39U1-207ENST00000553937 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
SDR39U1-207ENST00000553937 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
SDR39U1-207ENST00000553937 USP6P35125 1406 aa12.98□□□□□ -0.33
SDR39U1-207ENST00000553937 SPATA31A5Q5VU36 1347 aa12.98□□□□□ -0.33
SDR39U1-207ENST00000553937 SPATA31A7Q8IWB4 1347 aa12.98□□□□□ -0.33
SDR39U1-207ENST00000553937 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
SDR39U1-207ENST00000553937 CHRNA2Q15822 529 aa12.98□□□□□ -0.33
SDR39U1-207ENST00000553937 ABTB2Q8N961 1025 aa12.98□□□□□ -0.33
SDR39U1-207ENST00000553937 CAMTA1Q9Y6Y1 1673 aa12.98□□□□□ -0.33
SDR39U1-207ENST00000553937 SLIT3O75094 1523 aa12.98□□□□□ -0.33
SDR39U1-207ENST00000553937 USP19O94966 1318 aa12.97□□□□□ -0.33
SDR39U1-207ENST00000553937 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
SDR39U1-207ENST00000553937 KRT27Q7Z3Y8 459 aa12.97□□□□□ -0.33
SDR39U1-207ENST00000553937 COL18A1P39060 1754 aa12.97□□□□□ -0.33
SDR39U1-207ENST00000553937 BRD4O60885 1362 aaPredicted RBP12.96□□□□□ -0.33
SDR39U1-207ENST00000553937 CABP1Q9NZU7 370 aa12.96□□□□□ -0.33
SDR39U1-207ENST00000553937 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.34
SDR39U1-207ENST00000553937 CPDO75976 1380 aa12.95□□□□□ -0.34
SDR39U1-207ENST00000553937 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
SDR39U1-207ENST00000553937 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
SDR39U1-207ENST00000553937 TONSLQ96HA7 1378 aa12.94□□□□□ -0.34
SDR39U1-207ENST00000553937 SPATA31A1Q5TZJ5 1347 aa12.94□□□□□ -0.34
SDR39U1-207ENST00000553937 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
SDR39U1-207ENST00000553937 NLRP13Q86W25 1043 aa12.94□□□□□ -0.34
SDR39U1-207ENST00000553937 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
SDR39U1-207ENST00000553937 LTN1O94822 1766 aa12.93□□□□□ -0.34
SDR39U1-207ENST00000553937 COL5A2P05997 1499 aaPredicted RBP12.92□□□□□ -0.34
SDR39U1-207ENST00000553937 GCP02774 474 aa12.92□□□□□ -0.34
SDR39U1-207ENST00000553937 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
SDR39U1-207ENST00000553937 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
SDR39U1-207ENST00000553937 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
SDR39U1-207ENST00000553937 SBNO2Q9Y2G9 1366 aa12.92□□□□□ -0.34
SDR39U1-207ENST00000553937 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
SDR39U1-207ENST00000553937 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
SDR39U1-207ENST00000553937 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
SDR39U1-207ENST00000553937 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
SDR39U1-207ENST00000553937 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
SDR39U1-207ENST00000553937 SRCAPQ6ZRS2 3230 aa12.9□□□□□ -0.34
SDR39U1-207ENST00000553937 EVA1CP58658 441 aa12.9□□□□□ -0.34
SDR39U1-207ENST00000553937 NLRP6P59044 892 aa12.9□□□□□ -0.34
SDR39U1-207ENST00000553937 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.34
SDR39U1-207ENST00000553937 RREB1Q92766 1687 aa12.89□□□□□ -0.35
SDR39U1-207ENST00000553937 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
SDR39U1-207ENST00000553937 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
SDR39U1-207ENST00000553937 TTC21BQ7Z4L5 1316 aa12.88□□□□□ -0.35
SDR39U1-207ENST00000553937 NFAT5O94916 1531 aa12.88□□□□□ -0.35
SDR39U1-207ENST00000553937 CCER1Q8TC90 406 aaPredicted RBP12.88□□□□□ -0.35
SDR39U1-207ENST00000553937 KTN1Q86UP2 1357 aaKnown RBP12.88□□□□□ -0.35
SDR39U1-207ENST00000553937 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
SDR39U1-207ENST00000553937 CRB1P82279 1406 aa12.88□□□□□ -0.35
SDR39U1-207ENST00000553937 AATKQ6ZMQ8 1374 aa12.87□□□□□ -0.35
SDR39U1-207ENST00000553937 BAG6P46379 1132 aa12.87□□□□□ -0.35
SDR39U1-207ENST00000553937 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
SDR39U1-207ENST00000553937 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
SDR39U1-207ENST00000553937 NUP188Q5SRE5 1749 aa12.87□□□□□ -0.35
SDR39U1-207ENST00000553937 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
SDR39U1-207ENST00000553937 TCP11L2Q8N4U5 519 aa12.86□□□□□ -0.35
SDR39U1-207ENST00000553937 LRP5O75197 1615 aa12.86□□□□□ -0.35
SDR39U1-207ENST00000553937 DISP2A7MBM2 1401 aa12.86□□□□□ -0.35
SDR39U1-207ENST00000553937 ABCC6O95255 1503 aa12.85□□□□□ -0.35
SDR39U1-207ENST00000553937 SOX12O15370 315 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms