RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 CERKQ8TCT0 537 aa19.25■□□□□ 0.67
PRKCH-206ENST00000553830 NME9Q86XW9 330 aa19.24■□□□□ 0.67
PRKCH-206ENST00000553830 GGNBP2Q9H3C7 697 aa19.24■□□□□ 0.67
PRKCH-206ENST00000553830 TTC21BQ7Z4L5 1316 aa19.24■□□□□ 0.67
PRKCH-206ENST00000553830 UBAP1LF5GYI3 381 aa19.23■□□□□ 0.67
PRKCH-206ENST00000553830 PIP4K2BP78356 416 aa19.23■□□□□ 0.67
PRKCH-206ENST00000553830 PLEKHG5O94827 1062 aa19.22■□□□□ 0.67
PRKCH-206ENST00000553830 KRT28Q7Z3Y7 464 aa19.22■□□□□ 0.67
PRKCH-206ENST00000553830 ZRANB1Q9UGI0 708 aa19.22■□□□□ 0.67
PRKCH-206ENST00000553830 TRPM3Q9HCF6 1732 aaPredicted RBP19.22■□□□□ 0.67
PRKCH-206ENST00000553830 PIK3C2AO00443 1686 aa19.21■□□□□ 0.67
PRKCH-206ENST00000553830 TOM1O60784 492 aa19.21■□□□□ 0.67
PRKCH-206ENST00000553830 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
PRKCH-206ENST00000553830 NUTM2GQ5VZR2 741 aa19.21■□□□□ 0.67
PRKCH-206ENST00000553830 LMOD2Q6P5Q4 547 aa19.21■□□□□ 0.67
PRKCH-206ENST00000553830 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
PRKCH-206ENST00000553830 PRKRIP1Q9H875 184 aaPredicted RBP19.2■□□□□ 0.66
PRKCH-206ENST00000553830 NHSL1Q5SYE7 1610 aa19.2■□□□□ 0.66
PRKCH-206ENST00000553830 NPHP3Q7Z494 1330 aa19.2■□□□□ 0.66
PRKCH-206ENST00000553830 FYB1O15117 783 aa19.19■□□□□ 0.66
PRKCH-206ENST00000553830 IQSEC2Q5JU85 1478 aa19.19■□□□□ 0.66
PRKCH-206ENST00000553830 SSH2Q76I76 1423 aa19.18■□□□□ 0.66
PRKCH-206ENST00000553830 TTC21AQ8NDW8 1320 aa19.18■□□□□ 0.66
PRKCH-206ENST00000553830 NSD2O96028 1365 aa19.18■□□□□ 0.66
PRKCH-206ENST00000553830 NPC1L1Q9UHC9 1359 aa19.17■□□□□ 0.66
PRKCH-206ENST00000553830 PXDNQ92626 1479 aa19.16■□□□□ 0.66
PRKCH-206ENST00000553830 RALBP1Q15311 655 aa19.16■□□□□ 0.66
PRKCH-206ENST00000553830 ABTB2Q8N961 1025 aa19.16■□□□□ 0.66
PRKCH-206ENST00000553830 PHLPP1O60346 1717 aa19.16■□□□□ 0.66
PRKCH-206ENST00000553830 MARF1Q9Y4F3 1742 aaKnown RBP19.16■□□□□ 0.66
PRKCH-206ENST00000553830 PARD3Q8TEW0 1356 aa19.16■□□□□ 0.66
PRKCH-206ENST00000553830 ALS2Q96Q42 1657 aa19.15■□□□□ 0.66
PRKCH-206ENST00000553830 SOX12O15370 315 aa19.15■□□□□ 0.66
PRKCH-206ENST00000553830 COG3Q96JB2 828 aa19.15■□□□□ 0.66
PRKCH-206ENST00000553830 NLRP6P59044 892 aa19.14■□□□□ 0.65
PRKCH-206ENST00000553830 MAP2P11137 1827 aaKnown RBP19.14■□□□□ 0.65
PRKCH-206ENST00000553830 BRD4O60885 1362 aaPredicted RBP19.13■□□□□ 0.65
PRKCH-206ENST00000553830 MYBBP1AQ9BQG0 1328 aaKnown RBP19.12■□□□□ 0.65
PRKCH-206ENST00000553830 AHDC1Q5TGY3 1603 aaPredicted RBP19.11■□□□□ 0.65
PRKCH-206ENST00000553830 OVOS2A0A0J9YW53 1432 aa19.11■□□□□ 0.65
PRKCH-206ENST00000553830 TNS3Q68CZ2 1445 aa19.11■□□□□ 0.65
PRKCH-206ENST00000553830 OVOS2Q6IE36 1432 aa19.11■□□□□ 0.65
PRKCH-206ENST00000553830 USP54Q70EL1 1684 aa19.11■□□□□ 0.65
PRKCH-206ENST00000553830 SBNO1A3KN83 1393 aa19.1■□□□□ 0.65
PRKCH-206ENST00000553830 FBLN1P23142 703 aa19.1■□□□□ 0.65
PRKCH-206ENST00000553830 SOS2Q07890 1332 aaPredicted RBP19.09■□□□□ 0.65
PRKCH-206ENST00000553830 PPP2R1AP30153 589 aa19.09■□□□□ 0.65
PRKCH-206ENST00000553830 SPATA31A3Q5VYP0 1347 aa19.08■□□□□ 0.65
PRKCH-206ENST00000553830 USP31Q70CQ4 1352 aa19.07■□□□□ 0.64
PRKCH-206ENST00000553830 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
PRKCH-206ENST00000553830 NLRP13Q86W25 1043 aa19.07■□□□□ 0.64
PRKCH-206ENST00000553830 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
PRKCH-206ENST00000553830 COL16A1Q07092 1604 aaPredicted RBP19.06■□□□□ 0.64
PRKCH-206ENST00000553830 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
PRKCH-206ENST00000553830 LTN1O94822 1766 aa19.06■□□□□ 0.64
PRKCH-206ENST00000553830 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
PRKCH-206ENST00000553830 RRS1Q15050 365 aaKnown RBP19.05■□□□□ 0.64
PRKCH-206ENST00000553830 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
PRKCH-206ENST00000553830 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
PRKCH-206ENST00000553830 MED1Q15648 1581 aaPredicted RBP19.04■□□□□ 0.64
PRKCH-206ENST00000553830 CABLES1Q8TDN4 633 aa19.04■□□□□ 0.64
PRKCH-206ENST00000553830 CRYBG1Q9Y4K1 1723 aa19.04■□□□□ 0.64
PRKCH-206ENST00000553830 ABCA3Q99758 1704 aa19.03■□□□□ 0.64
PRKCH-206ENST00000553830 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
PRKCH-206ENST00000553830 MTHFSP49914 203 aa19.02■□□□□ 0.64
PRKCH-206ENST00000553830 EMILIN1Q9Y6C2 1016 aa19.02■□□□□ 0.64
PRKCH-206ENST00000553830 SLIT3O75094 1523 aa19.01■□□□□ 0.63
PRKCH-206ENST00000553830 HAP1P54257 671 aaPredicted RBP19.01■□□□□ 0.63
PRKCH-206ENST00000553830 PEAK1Q9H792 1746 aa19■□□□□ 0.63
PRKCH-206ENST00000553830 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
PRKCH-206ENST00000553830 NFAT5O94916 1531 aa19■□□□□ 0.63
PRKCH-206ENST00000553830 USP19O94966 1318 aa19■□□□□ 0.63
PRKCH-206ENST00000553830 POLKQ9UBT6 870 aa18.99■□□□□ 0.63
PRKCH-206ENST00000553830 AATKQ6ZMQ8 1374 aa18.98■□□□□ 0.63
PRKCH-206ENST00000553830 GCP02774 474 aa18.98■□□□□ 0.63
PRKCH-206ENST00000553830 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
PRKCH-206ENST00000553830 PNPLA6Q8IY17 1366 aa18.97■□□□□ 0.63
PRKCH-206ENST00000553830 AMPHP49418 695 aa18.97■□□□□ 0.63
PRKCH-206ENST00000553830 ZC3H6P61129 1189 aaKnown RBP18.97■□□□□ 0.63
PRKCH-206ENST00000553830 KCNH5Q8NCM2 988 aa18.97■□□□□ 0.63
PRKCH-206ENST00000553830 CFAP53Q96M91 514 aa18.97■□□□□ 0.63
PRKCH-206ENST00000553830 RGPD5Q99666 1765 aa18.96■□□□□ 0.63
PRKCH-206ENST00000553830 COL22A1Q8NFW1 1626 aaPredicted RBP18.96■□□□□ 0.63
PRKCH-206ENST00000553830 HSPA1LP34931 641 aa18.95■□□□□ 0.62
PRKCH-206ENST00000553830 FAM9BQ8IZU0 186 aa18.95■□□□□ 0.62
PRKCH-206ENST00000553830 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
PRKCH-206ENST00000553830 SHPRHQ149N8 1683 aa18.94■□□□□ 0.62
PRKCH-206ENST00000553830 SMG6Q86US8 1419 aaKnown RBP18.93■□□□□ 0.62
PRKCH-206ENST00000553830 NUTM2BA6NNL0 878 aaPredicted RBP18.93■□□□□ 0.62
PRKCH-206ENST00000553830 NUTM2EB1AL46 878 aaPredicted RBP18.93■□□□□ 0.62
PRKCH-206ENST00000553830 NUTM2AQ8IVF1 878 aaPredicted RBP18.93■□□□□ 0.62
PRKCH-206ENST00000553830 COL3A1P02461 1466 aaPredicted RBP18.91■□□□□ 0.62
PRKCH-206ENST00000553830 CHRNA2Q15822 529 aa18.91■□□□□ 0.62
PRKCH-206ENST00000553830 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
PRKCH-206ENST00000553830 FLT4P35916 1363 aa18.91■□□□□ 0.62
PRKCH-206ENST00000553830 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
PRKCH-206ENST00000553830 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
PRKCH-206ENST00000553830 KIAA0232Q92628 1395 aa18.9■□□□□ 0.62
PRKCH-206ENST00000553830 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.61
PRKCH-206ENST00000553830 HOXC9P31274 260 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms