RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 MARF1Q9Y4F3 1742 aaKnown RBP14.46□□□□□ -0.09
HNRNPC-208ENST00000553753 ALS2Q96Q42 1657 aa14.46□□□□□ -0.09
HNRNPC-208ENST00000553753 SBNO2Q9Y2G9 1366 aa14.46□□□□□ -0.09
HNRNPC-208ENST00000553753 CCER1Q8TC90 406 aaPredicted RBP14.46□□□□□ -0.09
HNRNPC-208ENST00000553753 RBM6P78332 1123 aaKnown RBP14.45□□□□□ -0.1
HNRNPC-208ENST00000553753 TRPC5Q9UL62 973 aaPredicted RBP14.45□□□□□ -0.1
HNRNPC-208ENST00000553753 BCL9LQ86UU0 1499 aa14.44□□□□□ -0.1
HNRNPC-208ENST00000553753 ABTB2Q8N961 1025 aa14.42□□□□□ -0.1
HNRNPC-208ENST00000553753 ATAD2Q6PL18 1390 aa14.42□□□□□ -0.1
HNRNPC-208ENST00000553753 ABCA3Q99758 1704 aa14.42□□□□□ -0.1
HNRNPC-208ENST00000553753 SLIT2O94813 1529 aa14.42□□□□□ -0.1
HNRNPC-208ENST00000553753 CDK12Q9NYV4 1490 aaPredicted RBP14.42□□□□□ -0.1
HNRNPC-208ENST00000553753 ST20-MTHFSA0A0A6YYL1 179 aa14.42□□□□□ -0.1
HNRNPC-208ENST00000553753 FAM83GA6ND36 823 aa14.42□□□□□ -0.1
HNRNPC-208ENST00000553753 UNC5CLQ8IV45 518 aa14.42□□□□□ -0.1
HNRNPC-208ENST00000553753 ATRNO75882 1429 aa14.41□□□□□ -0.1
HNRNPC-208ENST00000553753 NUTM2GQ5VZR2 741 aa14.41□□□□□ -0.1
HNRNPC-208ENST00000553753 BRD4O60885 1362 aaPredicted RBP14.41□□□□□ -0.1
HNRNPC-208ENST00000553753 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
HNRNPC-208ENST00000553753 ZNF692Q9BU19 519 aaPredicted RBP14.4□□□□□ -0.1
HNRNPC-208ENST00000553753 USP6P35125 1406 aa14.4□□□□□ -0.1
HNRNPC-208ENST00000553753 GJD4Q96KN9 370 aaPredicted RBP14.39□□□□□ -0.11
HNRNPC-208ENST00000553753 TESK2Q96S53 571 aa14.39□□□□□ -0.11
HNRNPC-208ENST00000553753 NLRP13Q86W25 1043 aa14.38□□□□□ -0.11
HNRNPC-208ENST00000553753 PUS7Q96PZ0 661 aaKnown RBP14.37□□□□□ -0.11
HNRNPC-208ENST00000553753 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
HNRNPC-208ENST00000553753 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.37□□□□□ -0.11
HNRNPC-208ENST00000553753 CRYBG1Q9Y4K1 1723 aa14.37□□□□□ -0.11
HNRNPC-208ENST00000553753 RGS12O14924 1447 aa14.37□□□□□ -0.11
HNRNPC-208ENST00000553753 USP47Q96K76 1375 aa14.37□□□□□ -0.11
HNRNPC-208ENST00000553753 BTG4Q9NY30 223 aa14.37□□□□□ -0.11
HNRNPC-208ENST00000553753 CPSF1Q10570 1443 aaKnown RBP14.36□□□□□ -0.11
HNRNPC-208ENST00000553753 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
HNRNPC-208ENST00000553753 NWD2Q9ULI1 1742 aa14.36□□□□□ -0.11
HNRNPC-208ENST00000553753 NLRP6P59044 892 aa14.36□□□□□ -0.11
HNRNPC-208ENST00000553753 ZC3H6P61129 1189 aaKnown RBP14.36□□□□□ -0.11
HNRNPC-208ENST00000553753 VPS72Q15906 364 aa14.36□□□□□ -0.11
HNRNPC-208ENST00000553753 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
HNRNPC-208ENST00000553753 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
HNRNPC-208ENST00000553753 PLCH1Q4KWH8 1693 aa14.35□□□□□ -0.11
HNRNPC-208ENST00000553753 EP400Q96L91 3159 aa14.35□□□□□ -0.11
HNRNPC-208ENST00000553753 USP19O94966 1318 aa14.35□□□□□ -0.11
HNRNPC-208ENST00000553753 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
HNRNPC-208ENST00000553753 GCP02774 474 aa14.34□□□□□ -0.11
HNRNPC-208ENST00000553753 SLC12A5Q9H2X9 1139 aa14.34□□□□□ -0.11
HNRNPC-208ENST00000553753 COL14A1Q05707 1796 aaKnown RBP14.34□□□□□ -0.11
HNRNPC-208ENST00000553753 PHRF1Q9P1Y6 1649 aaKnown RBP14.34□□□□□ -0.11
HNRNPC-208ENST00000553753 TTC21BQ7Z4L5 1316 aa14.34□□□□□ -0.11
HNRNPC-208ENST00000553753 CCDC9Q9Y3X0 531 aaKnown RBP14.34□□□□□ -0.11
HNRNPC-208ENST00000553753 TMF1P82094 1093 aa14.33□□□□□ -0.12
HNRNPC-208ENST00000553753 CHRNA2Q15822 529 aa14.33□□□□□ -0.12
HNRNPC-208ENST00000553753 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
HNRNPC-208ENST00000553753 AKAP12Q02952 1782 aa14.33□□□□□ -0.12
HNRNPC-208ENST00000553753 HDGFL2Q7Z4V5 671 aaPredicted RBP14.32□□□□□ -0.12
HNRNPC-208ENST00000553753 GLI3P10071 1580 aa14.32□□□□□ -0.12
HNRNPC-208ENST00000553753 TERF2IPQ9NYB0 399 aa14.32□□□□□ -0.12
HNRNPC-208ENST00000553753 CPDO75976 1380 aa14.31□□□□□ -0.12
HNRNPC-208ENST00000553753 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
HNRNPC-208ENST00000553753 NRKQ7Z2Y5 1582 aa14.31□□□□□ -0.12
HNRNPC-208ENST00000553753 PIK3C2AO00443 1686 aa14.3□□□□□ -0.12
HNRNPC-208ENST00000553753 UPF1Q92900 1129 aaKnown RBP eCLIP14.3□□□□□ -0.12
HNRNPC-208ENST00000553753 NINLQ9Y2I6 1382 aa14.3□□□□□ -0.12
HNRNPC-208ENST00000553753 NRAPQ86VF7 1730 aa14.3□□□□□ -0.12
HNRNPC-208ENST00000553753 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
HNRNPC-208ENST00000553753 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.29□□□□□ -0.12
HNRNPC-208ENST00000553753 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
HNRNPC-208ENST00000553753 CDCA8Q53HL2 280 aa14.29□□□□□ -0.12
HNRNPC-208ENST00000553753 MON2Q7Z3U7 1717 aa14.29□□□□□ -0.12
HNRNPC-208ENST00000553753 SLIT3O75094 1523 aa14.28□□□□□ -0.12
HNRNPC-208ENST00000553753 EVA1CP58658 441 aa14.28□□□□□ -0.12
HNRNPC-208ENST00000553753 SEPT12Q8IYM1 358 aa14.28□□□□□ -0.12
HNRNPC-208ENST00000553753 KCNH5Q8NCM2 988 aa14.28□□□□□ -0.12
HNRNPC-208ENST00000553753 STRN4Q9NRL3 753 aa14.28□□□□□ -0.12
HNRNPC-208ENST00000553753 SPATA31A5Q5VU36 1347 aa14.27□□□□□ -0.12
HNRNPC-208ENST00000553753 SPATA31A7Q8IWB4 1347 aa14.27□□□□□ -0.12
HNRNPC-208ENST00000553753 EDC4Q6P2E9 1401 aaKnown RBP14.27□□□□□ -0.13
HNRNPC-208ENST00000553753 FAM98CQ17RN3 349 aaKnown RBP14.27□□□□□ -0.13
HNRNPC-208ENST00000553753 CAMTA1Q9Y6Y1 1673 aa14.26□□□□□ -0.13
HNRNPC-208ENST00000553753 ZBTB7CA1YPR0 619 aa14.26□□□□□ -0.13
HNRNPC-208ENST00000553753 NME9Q86XW9 330 aa14.26□□□□□ -0.13
HNRNPC-208ENST00000553753 USP31Q70CQ4 1352 aa14.25□□□□□ -0.13
HNRNPC-208ENST00000553753 SOX12O15370 315 aa14.25□□□□□ -0.13
HNRNPC-208ENST00000553753 EIF4G2P78344 907 aaKnown RBP eCLIP14.25□□□□□ -0.13
HNRNPC-208ENST00000553753 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
HNRNPC-208ENST00000553753 AATKQ6ZMQ8 1374 aa14.25□□□□□ -0.13
HNRNPC-208ENST00000553753 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
HNRNPC-208ENST00000553753 A0A0G2JS52 829 aa14.24□□□□□ -0.13
HNRNPC-208ENST00000553753 MYT1Q01538 1121 aa14.24□□□□□ -0.13
HNRNPC-208ENST00000553753 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
HNRNPC-208ENST00000553753 LMO7Q8WWI1 1683 aa14.24□□□□□ -0.13
HNRNPC-208ENST00000553753 LARP1Q6PKG0 1096 aaKnown RBP14.24□□□□□ -0.13
HNRNPC-208ENST00000553753 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
HNRNPC-208ENST00000553753 USP35Q9P2H5 1018 aa14.23□□□□□ -0.13
HNRNPC-208ENST00000553753 KRT27Q7Z3Y8 459 aa14.22□□□□□ -0.13
HNRNPC-208ENST00000553753 AXIN2Q9Y2T1 843 aa14.22□□□□□ -0.13
HNRNPC-208ENST00000553753 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
HNRNPC-208ENST00000553753 BRWD3Q6RI45 1802 aa14.22□□□□□ -0.13
HNRNPC-208ENST00000553753 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
HNRNPC-208ENST00000553753 NFAT5O94916 1531 aa14.2□□□□□ -0.14
HNRNPC-208ENST00000553753 BARGINQ6ZT62 677 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms