RNA–Protein interactions for RNA: ENST00000553674.1

UBR7-202, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 2

Gene UBR7, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-202ENST00000553674 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
UBR7-202ENST00000553674 BRD4O60885 1362 aaPredicted RBP25.22■■□□□ 1.63
UBR7-202ENST00000553674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.22■■□□□ 1.63
UBR7-202ENST00000553674 TRPM3Q9HCF6 1732 aaPredicted RBP25.21■■□□□ 1.63
UBR7-202ENST00000553674 FYB1O15117 783 aa25.21■■□□□ 1.63
UBR7-202ENST00000553674 NME9Q86XW9 330 aa25.2■■□□□ 1.62
UBR7-202ENST00000553674 ZRANB1Q9UGI0 708 aa25.2■■□□□ 1.62
UBR7-202ENST00000553674 SBNO1A3KN83 1393 aa25.19■■□□□ 1.62
UBR7-202ENST00000553674 AHDC1Q5TGY3 1603 aaPredicted RBP25.19■■□□□ 1.62
UBR7-202ENST00000553674 TTC21AQ8NDW8 1320 aa25.19■■□□□ 1.62
UBR7-202ENST00000553674 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
UBR7-202ENST00000553674 NPC1L1Q9UHC9 1359 aa25.18■■□□□ 1.62
UBR7-202ENST00000553674 CGNL1Q0VF96 1302 aa25.17■■□□□ 1.62
UBR7-202ENST00000553674 PAK3O75914 559 aaPredicted RBP25.17■■□□□ 1.62
UBR7-202ENST00000553674 SPATA31A3Q5VYP0 1347 aa25.16■■□□□ 1.62
UBR7-202ENST00000553674 DIEXFQ68CQ4 756 aaKnown RBP25.16■■□□□ 1.62
UBR7-202ENST00000553674 GGNBP2Q9H3C7 697 aa25.16■■□□□ 1.62
UBR7-202ENST00000553674 CC2D1BQ5T0F9 858 aaKnown RBP25.14■■□□□ 1.62
UBR7-202ENST00000553674 USP31Q70CQ4 1352 aa25.14■■□□□ 1.61
UBR7-202ENST00000553674 PIK3C2AO00443 1686 aa25.13■■□□□ 1.61
UBR7-202ENST00000553674 ABTB2Q8N961 1025 aa25.12■■□□□ 1.61
UBR7-202ENST00000553674 ALS2Q96Q42 1657 aa25.12■■□□□ 1.61
UBR7-202ENST00000553674 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
UBR7-202ENST00000553674 CNGB1Q14028 1251 aaPredicted RBP25.11■■□□□ 1.61
UBR7-202ENST00000553674 NUTM2GQ5VZR2 741 aa25.11■■□□□ 1.61
UBR7-202ENST00000553674 NSD2O96028 1365 aa25.1■■□□□ 1.61
UBR7-202ENST00000553674 COL16A1Q07092 1604 aaPredicted RBP25.1■■□□□ 1.61
UBR7-202ENST00000553674 NLRP6P59044 892 aa25.09■■□□□ 1.61
UBR7-202ENST00000553674 OVOS2A0A0J9YW53 1432 aa25.09■■□□□ 1.61
UBR7-202ENST00000553674 OVOS2Q6IE36 1432 aa25.09■■□□□ 1.61
UBR7-202ENST00000553674 KIF20BQ96Q89 1820 aa25.09■■□□□ 1.61
UBR7-202ENST00000553674 PHLPP1O60346 1717 aa25.09■■□□□ 1.61
UBR7-202ENST00000553674 LRRC59Q96AG4 307 aaKnown RBP25.08■■□□□ 1.61
UBR7-202ENST00000553674 MARF1Q9Y4F3 1742 aaKnown RBP25.07■■□□□ 1.6
UBR7-202ENST00000553674 LMOD2Q6P5Q4 547 aa25.07■■□□□ 1.6
UBR7-202ENST00000553674 PARD3Q8TEW0 1356 aa25.06■■□□□ 1.6
UBR7-202ENST00000553674 PRKRIP1Q9H875 184 aaPredicted RBP25.06■■□□□ 1.6
UBR7-202ENST00000553674 USP54Q70EL1 1684 aa25.05■■□□□ 1.6
UBR7-202ENST00000553674 HSPA1LP34931 641 aa25.05■■□□□ 1.6
UBR7-202ENST00000553674 MORC1Q86VD1 984 aa25.05■■□□□ 1.6
UBR7-202ENST00000553674 COG3Q96JB2 828 aa25.05■■□□□ 1.6
UBR7-202ENST00000553674 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
UBR7-202ENST00000553674 NLRP13Q86W25 1043 aa25.04■■□□□ 1.6
UBR7-202ENST00000553674 USP19O94966 1318 aa25.04■■□□□ 1.6
UBR7-202ENST00000553674 MED1Q15648 1581 aaPredicted RBP25.03■■□□□ 1.6
UBR7-202ENST00000553674 ANKRD26Q9UPS8 1709 aa25.03■■□□□ 1.6
UBR7-202ENST00000553674 FBLN1P23142 703 aa25.02■■□□□ 1.6
UBR7-202ENST00000553674 PNPLA6Q8IY17 1366 aa25.02■■□□□ 1.6
UBR7-202ENST00000553674 RALBP1Q15311 655 aa25.01■■□□□ 1.59
UBR7-202ENST00000553674 CABLES1Q8TDN4 633 aa25.01■■□□□ 1.59
UBR7-202ENST00000553674 ANP32CO43423 234 aa25■■□□□ 1.59
UBR7-202ENST00000553674 FBXO41Q8TF61 875 aa25■■□□□ 1.59
UBR7-202ENST00000553674 SLIT3O75094 1523 aa25■■□□□ 1.59
UBR7-202ENST00000553674 TNNT2P45379 298 aaPredicted RBP24.99■■□□□ 1.59
UBR7-202ENST00000553674 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
UBR7-202ENST00000553674 GCP02774 474 aa24.97■■□□□ 1.59
UBR7-202ENST00000553674 PPP2R1AP30153 589 aa24.97■■□□□ 1.59
UBR7-202ENST00000553674 CRYBG1Q9Y4K1 1723 aa24.97■■□□□ 1.59
UBR7-202ENST00000553674 MIER1Q8N108 512 aa24.96■■□□□ 1.59
UBR7-202ENST00000553674 COL22A1Q8NFW1 1626 aaPredicted RBP24.96■■□□□ 1.59
UBR7-202ENST00000553674 AATKQ6ZMQ8 1374 aa24.95■■□□□ 1.59
UBR7-202ENST00000553674 NFAT5O94916 1531 aa24.95■■□□□ 1.58
UBR7-202ENST00000553674 SOX12O15370 315 aa24.94■■□□□ 1.58
UBR7-202ENST00000553674 KCNH5Q8NCM2 988 aa24.93■■□□□ 1.58
UBR7-202ENST00000553674 POLKQ9UBT6 870 aa24.93■■□□□ 1.58
UBR7-202ENST00000553674 JCADQ9P266 1359 aa24.93■■□□□ 1.58
UBR7-202ENST00000553674 PHRF1Q9P1Y6 1649 aaKnown RBP24.92■■□□□ 1.58
UBR7-202ENST00000553674 MYBBP1AQ9BQG0 1328 aaKnown RBP24.91■■□□□ 1.58
UBR7-202ENST00000553674 RRS1Q15050 365 aaKnown RBP24.91■■□□□ 1.58
UBR7-202ENST00000553674 SHPRHQ149N8 1683 aa24.9■■□□□ 1.58
UBR7-202ENST00000553674 ABCA3Q99758 1704 aa24.89■■□□□ 1.58
UBR7-202ENST00000553674 MAP3K19Q56UN5 1328 aa24.89■■□□□ 1.58
UBR7-202ENST00000553674 ARHGEF25Q86VW2 580 aa24.89■■□□□ 1.58
UBR7-202ENST00000553674 EMILIN1Q9Y6C2 1016 aa24.89■■□□□ 1.58
UBR7-202ENST00000553674 MTHFSP49914 203 aa24.88■■□□□ 1.57
UBR7-202ENST00000553674 ZC3H6P61129 1189 aaKnown RBP24.87■■□□□ 1.57
UBR7-202ENST00000553674 CCDC184Q52MB2 194 aa24.87■■□□□ 1.57
UBR7-202ENST00000553674 SMG6Q86US8 1419 aaKnown RBP24.86■■□□□ 1.57
UBR7-202ENST00000553674 CPDO75976 1380 aa24.85■■□□□ 1.57
UBR7-202ENST00000553674 PEAK1Q9H792 1746 aa24.84■■□□□ 1.57
UBR7-202ENST00000553674 MAP2P11137 1827 aaKnown RBP24.84■■□□□ 1.57
UBR7-202ENST00000553674 KIAA0232Q92628 1395 aa24.83■■□□□ 1.57
UBR7-202ENST00000553674 NUTM2BA6NNL0 878 aaPredicted RBP24.82■■□□□ 1.56
UBR7-202ENST00000553674 NUTM2EB1AL46 878 aaPredicted RBP24.82■■□□□ 1.56
UBR7-202ENST00000553674 NUTM2AQ8IVF1 878 aaPredicted RBP24.82■■□□□ 1.56
UBR7-202ENST00000553674 SPATA31A6Q5VVP1 1343 aa24.82■■□□□ 1.56
UBR7-202ENST00000553674 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
UBR7-202ENST00000553674 INSRP06213 1382 aa24.8■■□□□ 1.56
UBR7-202ENST00000553674 FAM83GA6ND36 823 aa24.8■■□□□ 1.56
UBR7-202ENST00000553674 PPM1GO15355 546 aaPredicted RBP24.8■■□□□ 1.56
UBR7-202ENST00000553674 HOXC9P31274 260 aa24.8■■□□□ 1.56
UBR7-202ENST00000553674 CHRNA2Q15822 529 aa24.8■■□□□ 1.56
UBR7-202ENST00000553674 IP6K1Q92551 441 aa24.8■■□□□ 1.56
UBR7-202ENST00000553674 AXIN2Q9Y2T1 843 aa24.8■■□□□ 1.56
UBR7-202ENST00000553674 ZBTB7CA1YPR0 619 aa24.79■■□□□ 1.56
UBR7-202ENST00000553674 HSP90AB2PQ58FF8 381 aa24.79■■□□□ 1.56
UBR7-202ENST00000553674 COL18A1P39060 1754 aa24.79■■□□□ 1.56
UBR7-202ENST00000553674 LRP6O75581 1613 aa24.79■■□□□ 1.56
UBR7-202ENST00000553674 KIF24Q5T7B8 1368 aa24.79■■□□□ 1.56
UBR7-202ENST00000553674 LTN1O94822 1766 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms