RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SF3B2Q13435 895 aaKnown RBP23.01■■□□□ 1.27
ACTN1-209ENST00000553659 COL14A1Q05707 1796 aaKnown RBP23■■□□□ 1.27
ACTN1-209ENST00000553659 KRT27Q7Z3Y8 459 aa23■■□□□ 1.27
ACTN1-209ENST00000553659 DEFB132Q7Z7B7 95 aa22.99■■□□□ 1.27
ACTN1-209ENST00000553659 BTG4Q9NY30 223 aa22.98■■□□□ 1.27
ACTN1-209ENST00000553659 ARHGEF28Q8N1W1 1705 aaKnown RBP22.97■■□□□ 1.27
ACTN1-209ENST00000553659 NGDNQ8NEJ9 315 aaKnown RBP22.97■■□□□ 1.27
ACTN1-209ENST00000553659 ITSN1Q15811 1721 aa22.96■■□□□ 1.27
ACTN1-209ENST00000553659 CRYBG1Q9Y4K1 1723 aa22.96■■□□□ 1.27
ACTN1-209ENST00000553659 A0A0G2JS52 829 aa22.94■■□□□ 1.26
ACTN1-209ENST00000553659 PAK3O75914 559 aaPredicted RBP22.94■■□□□ 1.26
ACTN1-209ENST00000553659 MYT1Q01538 1121 aa22.94■■□□□ 1.26
ACTN1-209ENST00000553659 FAM98CQ17RN3 349 aaKnown RBP22.94■■□□□ 1.26
ACTN1-209ENST00000553659 NUDT16Q96DE0 195 aaKnown RBP22.92■■□□□ 1.26
ACTN1-209ENST00000553659 SRCAPQ6ZRS2 3230 aa22.9■■□□□ 1.26
ACTN1-209ENST00000553659 SPATA31A5Q5VU36 1347 aa22.9■■□□□ 1.26
ACTN1-209ENST00000553659 SPATA31A7Q8IWB4 1347 aa22.9■■□□□ 1.26
ACTN1-209ENST00000553659 ATP7BP35670 1465 aa22.9■■□□□ 1.26
ACTN1-209ENST00000553659 PRDM11Q9NQV5 511 aa22.89■■□□□ 1.25
ACTN1-209ENST00000553659 BAG6P46379 1132 aa22.88■■□□□ 1.25
ACTN1-209ENST00000553659 CDK19Q9BWU1 502 aa22.87■■□□□ 1.25
ACTN1-209ENST00000553659 KIAA1210Q9ULL0 1709 aa22.87■■□□□ 1.25
ACTN1-209ENST00000553659 RGPD1P0DJD0 1748 aa22.86■■□□□ 1.25
ACTN1-209ENST00000553659 THSD7AQ9UPZ6 1657 aa22.85■■□□□ 1.25
ACTN1-209ENST00000553659 PHRF1Q9P1Y6 1649 aaKnown RBP22.85■■□□□ 1.25
ACTN1-209ENST00000553659 KIAA0232Q92628 1395 aa22.84■■□□□ 1.25
ACTN1-209ENST00000553659 TOPAZ1Q8N9V7 1692 aa22.84■■□□□ 1.25
ACTN1-209ENST00000553659 CCDC61Q9Y6R9 512 aa22.83■■□□□ 1.25
ACTN1-209ENST00000553659 POLR3AO14802 1390 aaPredicted RBP22.83■■□□□ 1.25
ACTN1-209ENST00000553659 NBPF8Q3BBV2 869 aa22.82■■□□□ 1.24
ACTN1-209ENST00000553659 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
ACTN1-209ENST00000553659 ACEP12821 1306 aa22.82■■□□□ 1.24
ACTN1-209ENST00000553659 SPATA31A1Q5TZJ5 1347 aa22.82■■□□□ 1.24
ACTN1-209ENST00000553659 PLEKHG3A1L390 1219 aa22.81■■□□□ 1.24
ACTN1-209ENST00000553659 CHRNA2Q15822 529 aa22.81■■□□□ 1.24
ACTN1-209ENST00000553659 LRP5O75197 1615 aa22.81■■□□□ 1.24
ACTN1-209ENST00000553659 NUTM2GQ5VZR2 741 aa22.8■■□□□ 1.24
ACTN1-209ENST00000553659 ZC3H6P61129 1189 aaKnown RBP22.79■■□□□ 1.24
ACTN1-209ENST00000553659 EN1Q05925 392 aaPredicted RBP22.79■■□□□ 1.24
ACTN1-209ENST00000553659 STRN4Q9NRL3 753 aa22.78■■□□□ 1.24
ACTN1-209ENST00000553659 TIMELESSQ9UNS1 1208 aa22.78■■□□□ 1.24
ACTN1-209ENST00000553659 TNS1Q9HBL0 1735 aaKnown RBP22.77■■□□□ 1.24
ACTN1-209ENST00000553659 PSDA5PKW4 1024 aaPredicted RBP22.77■■□□□ 1.24
ACTN1-209ENST00000553659 NBPF1Q3BBV0 1214 aa22.77■■□□□ 1.24
ACTN1-209ENST00000553659 ABTB2Q8N961 1025 aa22.76■■□□□ 1.23
ACTN1-209ENST00000553659 DISP2A7MBM2 1401 aa22.75■■□□□ 1.23
ACTN1-209ENST00000553659 EVA1CP58658 441 aa22.75■■□□□ 1.23
ACTN1-209ENST00000553659 FAM196AQ6ZSG2 479 aa22.74■■□□□ 1.23
ACTN1-209ENST00000553659 NRKQ7Z2Y5 1582 aa22.73■■□□□ 1.23
ACTN1-209ENST00000553659 BARGINQ6ZT62 677 aa22.72■■□□□ 1.23
ACTN1-209ENST00000553659 USP35Q9P2H5 1018 aa22.72■■□□□ 1.23
ACTN1-209ENST00000553659 SSH2Q76I76 1423 aa22.72■■□□□ 1.23
ACTN1-209ENST00000553659 CAMTA1Q9Y6Y1 1673 aa22.71■■□□□ 1.23
ACTN1-209ENST00000553659 SRPK2P78362 688 aaKnown RBP22.71■■□□□ 1.23
ACTN1-209ENST00000553659 CPDO75976 1380 aa22.71■■□□□ 1.23
ACTN1-209ENST00000553659 TRIM37O94972 964 aa22.7■■□□□ 1.22
ACTN1-209ENST00000553659 NLRP13Q86W25 1043 aa22.7■■□□□ 1.22
ACTN1-209ENST00000553659 USP19O94966 1318 aa22.7■■□□□ 1.22
ACTN1-209ENST00000553659 CENPJQ9HC77 1338 aaPredicted RBP22.7■■□□□ 1.22
ACTN1-209ENST00000553659 PPIP5K1Q6PFW1 1433 aa22.7■■□□□ 1.22
ACTN1-209ENST00000553659 LMO7Q8WWI1 1683 aa22.7■■□□□ 1.22
ACTN1-209ENST00000553659 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
ACTN1-209ENST00000553659 EZH2Q15910 746 aaKnown RBP22.69■■□□□ 1.22
ACTN1-209ENST00000553659 LARP1Q6PKG0 1096 aaKnown RBP22.69■■□□□ 1.22
ACTN1-209ENST00000553659 GCP02774 474 aa22.68■■□□□ 1.22
ACTN1-209ENST00000553659 PDE3BQ13370 1112 aa22.68■■□□□ 1.22
ACTN1-209ENST00000553659 CAMKK2Q96RR4 588 aa22.68■■□□□ 1.22
ACTN1-209ENST00000553659 CABP2Q9NPB3 220 aa22.68■■□□□ 1.22
ACTN1-209ENST00000553659 QRICH2Q9H0J4 1663 aa22.68■■□□□ 1.22
ACTN1-209ENST00000553659 BRD4O60885 1362 aaPredicted RBP22.67■■□□□ 1.22
ACTN1-209ENST00000553659 R3HDM1Q15032 1099 aaKnown RBP22.67■■□□□ 1.22
ACTN1-209ENST00000553659 TCP11L2Q8N4U5 519 aa22.67■■□□□ 1.22
ACTN1-209ENST00000553659 APBA3O96018 575 aa22.65■■□□□ 1.22
ACTN1-209ENST00000553659 THRAP3Q9Y2W1 955 aaKnown RBP22.65■■□□□ 1.22
ACTN1-209ENST00000553659 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
ACTN1-209ENST00000553659 CABP1Q9NZU7 370 aa22.63■■□□□ 1.21
ACTN1-209ENST00000553659 PARP4Q9UKK3 1724 aaKnown RBP22.62■■□□□ 1.21
ACTN1-209ENST00000553659 USP6P35125 1406 aa22.61■■□□□ 1.21
ACTN1-209ENST00000553659 COL5A2P05997 1499 aaPredicted RBP22.6■■□□□ 1.21
ACTN1-209ENST00000553659 NLRP6P59044 892 aa22.6■■□□□ 1.21
ACTN1-209ENST00000553659 L3MBTL2Q969R5 705 aa22.6■■□□□ 1.21
ACTN1-209ENST00000553659 RREB1Q92766 1687 aa22.6■■□□□ 1.21
ACTN1-209ENST00000553659 CRB1P82279 1406 aa22.57■■□□□ 1.2
ACTN1-209ENST00000553659 NUP188Q5SRE5 1749 aa22.57■■□□□ 1.2
ACTN1-209ENST00000553659 AATKQ6ZMQ8 1374 aa22.57■■□□□ 1.2
ACTN1-209ENST00000553659 TRPM1Q7Z4N2 1603 aa22.57■■□□□ 1.2
ACTN1-209ENST00000553659 SLIT3O75094 1523 aa22.57■■□□□ 1.2
ACTN1-209ENST00000553659 EVC2Q86UK5 1308 aa22.57■■□□□ 1.2
ACTN1-209ENST00000553659 C11orf95C9JLR9 678 aaPredicted RBP22.56■■□□□ 1.2
ACTN1-209ENST00000553659 COL18A1P39060 1754 aa22.55■■□□□ 1.2
ACTN1-209ENST00000553659 ZBTB7CA1YPR0 619 aa22.55■■□□□ 1.2
ACTN1-209ENST00000553659 PIK3C2AO00443 1686 aa22.55■■□□□ 1.2
ACTN1-209ENST00000553659 SBF2Q86WG5 1849 aa22.54■■□□□ 1.2
ACTN1-209ENST00000553659 NBPF14Q5TI25 921 aa22.54■■□□□ 1.2
ACTN1-209ENST00000553659 ZNF692Q9BU19 519 aaPredicted RBP22.53■■□□□ 1.2
ACTN1-209ENST00000553659 AKAP12Q02952 1782 aa22.53■■□□□ 1.2
ACTN1-209ENST00000553659 PEAK1Q9H792 1746 aa22.52■■□□□ 1.2
ACTN1-209ENST00000553659 RGPD5Q99666 1765 aa22.52■■□□□ 1.2
ACTN1-209ENST00000553659 TOM1L2Q6ZVM7 507 aa22.51■■□□□ 1.19
ACTN1-209ENST00000553659 SIN3AQ96ST3 1273 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms