RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
SMARCE1P3-201ENST00000553649 NBR1Q14596 966 aa9.34□□□□□ -0.91
SMARCE1P3-201ENST00000553649 ANKLE2Q86XL3 938 aa9.34□□□□□ -0.91
SMARCE1P3-201ENST00000553649 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.92
SMARCE1P3-201ENST00000553649 ABCC1P33527 1531 aa9.33□□□□□ -0.92
SMARCE1P3-201ENST00000553649 MAP3K7O43318 606 aa9.33□□□□□ -0.92
SMARCE1P3-201ENST00000553649 CDCA7LQ96GN5 454 aa9.33□□□□□ -0.92
SMARCE1P3-201ENST00000553649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCE1P3-201ENST00000553649 CLTCQ00610 1675 aaKnown RBP9.32□□□□□ -0.92
SMARCE1P3-201ENST00000553649 CDK12Q9NYV4 1490 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1P3-201ENST00000553649 KIDINS220Q9ULH0 1771 aa9.32□□□□□ -0.92
SMARCE1P3-201ENST00000553649 ARHGAP5Q13017 1502 aa9.31□□□□□ -0.92
SMARCE1P3-201ENST00000553649 LRP6O75581 1613 aa9.31□□□□□ -0.92
SMARCE1P3-201ENST00000553649 ZNF772Q68DY9 489 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1P3-201ENST00000553649 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
SMARCE1P3-201ENST00000553649 PLXNC1O60486 1568 aa9.31□□□□□ -0.92
SMARCE1P3-201ENST00000553649 RXRBP28702 533 aa9.3□□□□□ -0.92
SMARCE1P3-201ENST00000553649 PRSS12P56730 875 aa9.3□□□□□ -0.92
SMARCE1P3-201ENST00000553649 PDIA6Q15084 440 aa9.3□□□□□ -0.92
SMARCE1P3-201ENST00000553649 NKX2-3Q8TAU0 364 aa9.3□□□□□ -0.92
SMARCE1P3-201ENST00000553649 V9GY48 417 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1P3-201ENST00000553649 DEPDC5O75140 1603 aa9.3□□□□□ -0.92
SMARCE1P3-201ENST00000553649 KIF14Q15058 1648 aa9.3□□□□□ -0.92
SMARCE1P3-201ENST00000553649 TROQ12816 1431 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1P3-201ENST00000553649 JCADQ9P266 1359 aa9.29□□□□□ -0.92
SMARCE1P3-201ENST00000553649 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.29□□□□□ -0.92
SMARCE1P3-201ENST00000553649 TNRQ92752 1358 aa9.28□□□□□ -0.92
SMARCE1P3-201ENST00000553649 APLP1P51693 650 aa9.28□□□□□ -0.92
SMARCE1P3-201ENST00000553649 TATDN2Q93075 761 aa9.28□□□□□ -0.92
SMARCE1P3-201ENST00000553649 IQGAP1P46940 1657 aa9.27□□□□□ -0.93
SMARCE1P3-201ENST00000553649 FBXO31Q5XUX0 539 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1P3-201ENST00000553649 THEMISQ8N1K5 641 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1P3-201ENST00000553649 ATP1B4Q9UN42 357 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1P3-201ENST00000553649 ITSN2Q9NZM3 1697 aa9.26□□□□□ -0.93
SMARCE1P3-201ENST00000553649 SAMD9LQ8IVG5 1584 aa9.26□□□□□ -0.93
SMARCE1P3-201ENST00000553649 RGS12O14924 1447 aa9.26□□□□□ -0.93
SMARCE1P3-201ENST00000553649 GGT6Q6P531 493 aa9.26□□□□□ -0.93
SMARCE1P3-201ENST00000553649 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
SMARCE1P3-201ENST00000553649 ROBO1Q9Y6N7 1651 aa9.26□□□□□ -0.93
SMARCE1P3-201ENST00000553649 PREX2Q70Z35 1606 aa9.25□□□□□ -0.93
SMARCE1P3-201ENST00000553649 ZNF787Q6DD87 383 aa9.25□□□□□ -0.93
SMARCE1P3-201ENST00000553649 CDC42BPBQ9Y5S2 1711 aa9.25□□□□□ -0.93
SMARCE1P3-201ENST00000553649 PDZRN3Q9UPQ7 1066 aa9.24□□□□□ -0.93
SMARCE1P3-201ENST00000553649 CDK11AQ9UQ88 783 aaPredicted RBP9.24□□□□□ -0.93
SMARCE1P3-201ENST00000553649 KDM5DQ9BY66 1539 aa9.23□□□□□ -0.93
SMARCE1P3-201ENST00000553649 FAM135AQ9P2D6 1515 aa9.23□□□□□ -0.93
SMARCE1P3-201ENST00000553649 SLC24A1O60721 1099 aa9.23□□□□□ -0.93
SMARCE1P3-201ENST00000553649 ZNF775Q96BV0 537 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1P3-201ENST00000553649 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
SMARCE1P3-201ENST00000553649 XIRP1Q702N8 1843 aaKnown RBP9.23□□□□□ -0.93
SMARCE1P3-201ENST00000553649 UGGT1Q9NYU2 1555 aa9.23□□□□□ -0.93
SMARCE1P3-201ENST00000553649 SPATA31A6Q5VVP1 1343 aa9.23□□□□□ -0.93
SMARCE1P3-201ENST00000553649 CLIP1P30622 1438 aa9.22□□□□□ -0.93
SMARCE1P3-201ENST00000553649 A2MP01023 1474 aa9.22□□□□□ -0.93
SMARCE1P3-201ENST00000553649 MEX3CQ5U5Q3 659 aaKnown RBP9.22□□□□□ -0.93
SMARCE1P3-201ENST00000553649 NUDT18Q6ZVK8 323 aa9.22□□□□□ -0.93
SMARCE1P3-201ENST00000553649 ZC3H13Q5T200 1668 aaKnown RBP9.22□□□□□ -0.93
SMARCE1P3-201ENST00000553649 TMEM94Q12767 1356 aa9.22□□□□□ -0.93
SMARCE1P3-201ENST00000553649 FMN1Q68DA7 1419 aa9.22□□□□□ -0.93
SMARCE1P3-201ENST00000553649 MIA2Q96PC5 1412 aa9.22□□□□□ -0.93
SMARCE1P3-201ENST00000553649 NLRP1Q9C000 1473 aa9.21□□□□□ -0.93
SMARCE1P3-201ENST00000553649 INO80Q9ULG1 1556 aaPredicted RBP9.21□□□□□ -0.93
SMARCE1P3-201ENST00000553649 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1P3-201ENST00000553649 NBPF26B4DH59 902 aa9.21□□□□□ -0.94
SMARCE1P3-201ENST00000553649 PZPP20742 1482 aa9.21□□□□□ -0.94
SMARCE1P3-201ENST00000553649 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.94
SMARCE1P3-201ENST00000553649 ATP7AQ04656 1500 aa9.21□□□□□ -0.94
SMARCE1P3-201ENST00000553649 MAP3K1Q13233 1512 aa9.21□□□□□ -0.94
SMARCE1P3-201ENST00000553649 COL16A1Q07092 1604 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 NUTM2DQ5VT03 806 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 TRIM67Q6ZTA4 783 aa9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 EMID1Q96A84 441 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 SPAG9O60271 1321 aaKnown RBP9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 FGD6Q6ZV73 1430 aa9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 KIAA1107Q9UPP5 1409 aa9.2□□□□□ -0.94
SMARCE1P3-201ENST00000553649 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
SMARCE1P3-201ENST00000553649 RNF40O75150 1001 aa9.19□□□□□ -0.94
SMARCE1P3-201ENST00000553649 UBTFP17480 764 aaKnown RBP9.19□□□□□ -0.94
SMARCE1P3-201ENST00000553649 OSBPP22059 807 aa9.19□□□□□ -0.94
SMARCE1P3-201ENST00000553649 COPS2P61201 443 aa9.19□□□□□ -0.94
SMARCE1P3-201ENST00000553649 EEA1Q15075 1411 aa9.18□□□□□ -0.94
SMARCE1P3-201ENST00000553649 ATAD2Q6PL18 1390 aa9.18□□□□□ -0.94
SMARCE1P3-201ENST00000553649 TTC13Q8NBP0 860 aa9.18□□□□□ -0.94
SMARCE1P3-201ENST00000553649 SYCP2Q9BX26 1530 aa9.18□□□□□ -0.94
SMARCE1P3-201ENST00000553649 PHLPP1O60346 1717 aa9.17□□□□□ -0.94
SMARCE1P3-201ENST00000553649 LRP5O75197 1615 aa9.17□□□□□ -0.94
SMARCE1P3-201ENST00000553649 AFF2P51816 1311 aa9.17□□□□□ -0.94
SMARCE1P3-201ENST00000553649 RBM6P78332 1123 aaKnown RBP9.17□□□□□ -0.94
SMARCE1P3-201ENST00000553649 SWT1Q5T5J6 900 aaKnown RBP9.17□□□□□ -0.94
SMARCE1P3-201ENST00000553649 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
SMARCE1P3-201ENST00000553649 ARHGAP35Q9NRY4 1499 aa9.15□□□□□ -0.94
SMARCE1P3-201ENST00000553649 LTKP29376 864 aa9.15□□□□□ -0.94
SMARCE1P3-201ENST00000553649 NPDC1Q9NQX5 325 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1P3-201ENST00000553649 SCAF11Q99590 1463 aaKnown RBP9.15□□□□□ -0.95
SMARCE1P3-201ENST00000553649 HNRNPMP52272 730 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMARCE1P3-201ENST00000553649 RBM27Q9P2N5 1060 aaKnown RBP9.14□□□□□ -0.95
SMARCE1P3-201ENST00000553649 ARIH1Q9Y4X5 557 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms