RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 RETREG3Q86VR2 466 aa9.33□□□□□ -0.92
FCF1-203ENST00000553615 SYMPKQ92797 1274 aaKnown RBP9.33□□□□□ -0.92
FCF1-203ENST00000553615 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
FCF1-203ENST00000553615 LILRB3O75022 631 aa9.32□□□□□ -0.92
FCF1-203ENST00000553615 NKX2-3Q8TAU0 364 aa9.32□□□□□ -0.92
FCF1-203ENST00000553615 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.32□□□□□ -0.92
FCF1-203ENST00000553615 TIMELESSQ9UNS1 1208 aa9.32□□□□□ -0.92
FCF1-203ENST00000553615 CUX2O14529 1486 aa9.32□□□□□ -0.92
FCF1-203ENST00000553615 QPCTQ16769 361 aa9.31□□□□□ -0.92
FCF1-203ENST00000553615 MSS51Q4VC12 460 aa9.31□□□□□ -0.92
FCF1-203ENST00000553615 CABLES1Q8TDN4 633 aa9.31□□□□□ -0.92
FCF1-203ENST00000553615 SLC6A16Q9GZN6 736 aa9.31□□□□□ -0.92
FCF1-203ENST00000553615 SMARCA2P51531 1590 aa9.31□□□□□ -0.92
FCF1-203ENST00000553615 DHX57Q6P158 1386 aaKnown RBP9.3□□□□□ -0.92
FCF1-203ENST00000553615 A0A0U1RQG5 324 aaPredicted RBP9.3□□□□□ -0.92
FCF1-203ENST00000553615 BRPF3Q9ULD4 1205 aa9.3□□□□□ -0.92
FCF1-203ENST00000553615 GGCXP38435 758 aa9.29□□□□□ -0.92
FCF1-203ENST00000553615 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
FCF1-203ENST00000553615 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
FCF1-203ENST00000553615 PPP2R2DQ66LE6 453 aa9.28□□□□□ -0.92
FCF1-203ENST00000553615 S1PR4O95977 384 aa9.27□□□□□ -0.93
FCF1-203ENST00000553615 EIF4G1Q04637 1599 aaKnown RBP9.25□□□□□ -0.93
FCF1-203ENST00000553615 JUNDP17535 347 aa9.25□□□□□ -0.93
FCF1-203ENST00000553615 DESI1Q6ICB0 168 aa9.25□□□□□ -0.93
FCF1-203ENST00000553615 PPP1R18Q6NYC8 613 aa9.25□□□□□ -0.93
FCF1-203ENST00000553615 HELBQ8NG08 1087 aaPredicted RBP9.25□□□□□ -0.93
FCF1-203ENST00000553615 TSC1Q92574 1164 aa9.25□□□□□ -0.93
FCF1-203ENST00000553615 PDCL3Q9H2J4 239 aa9.25□□□□□ -0.93
FCF1-203ENST00000553615 PRDM9Q9NQV7 894 aa9.25□□□□□ -0.93
FCF1-203ENST00000553615 CFAP99D6REC4 459 aa9.24□□□□□ -0.93
FCF1-203ENST00000553615 DXOO77932 396 aaKnown RBP9.24□□□□□ -0.93
FCF1-203ENST00000553615 RFC5P40937 340 aa9.24□□□□□ -0.93
FCF1-203ENST00000553615 MMP16P51512 607 aa9.24□□□□□ -0.93
FCF1-203ENST00000553615 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.24□□□□□ -0.93
FCF1-203ENST00000553615 A0A0G2JS52 829 aa9.23□□□□□ -0.93
FCF1-203ENST00000553615 ANP32CO43423 234 aa9.23□□□□□ -0.93
FCF1-203ENST00000553615 TPM2P07951 284 aa9.23□□□□□ -0.93
FCF1-203ENST00000553615 L1TD1Q5T7N2 865 aaKnown RBP9.23□□□□□ -0.93
FCF1-203ENST00000553615 MAP7D2Q96T17 732 aa9.23□□□□□ -0.93
FCF1-203ENST00000553615 TMEM259Q4ZIN3 620 aa9.22□□□□□ -0.93
FCF1-203ENST00000553615 FBXO31Q5XUX0 539 aaPredicted RBP9.22□□□□□ -0.93
FCF1-203ENST00000553615 RNF223E7ERA6 249 aa9.21□□□□□ -0.94
FCF1-203ENST00000553615 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.94
FCF1-203ENST00000553615 IPO4Q8TEX9 1081 aaKnown RBP9.21□□□□□ -0.94
FCF1-203ENST00000553615 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.94
FCF1-203ENST00000553615 CEP164Q9UPV0 1460 aa9.21□□□□□ -0.94
FCF1-203ENST00000553615 AP1G2O75843 785 aa9.2□□□□□ -0.94
FCF1-203ENST00000553615 PTPRNQ16849 979 aa9.2□□□□□ -0.94
FCF1-203ENST00000553615 ANKLE1Q8NAG6 615 aa9.2□□□□□ -0.94
FCF1-203ENST00000553615 PRDM4Q9UKN5 801 aa9.2□□□□□ -0.94
FCF1-203ENST00000553615 PPEF1O14829 653 aaPredicted RBP9.19□□□□□ -0.94
FCF1-203ENST00000553615 CNGB1Q14028 1251 aaPredicted RBP9.19□□□□□ -0.94
FCF1-203ENST00000553615 LYPD8Q6UX82 237 aa9.19□□□□□ -0.94
FCF1-203ENST00000553615 FCF1Q9Y324 198 aaKnown RBP9.19□□□□□ -0.94
FCF1-203ENST00000553615 RSF1Q96T23 1441 aaPredicted RBP9.19□□□□□ -0.94
FCF1-203ENST00000553615 GOLGA3Q08378 1498 aa9.19□□□□□ -0.94
FCF1-203ENST00000553615 ARID4BQ4LE39 1312 aaPredicted RBP9.18□□□□□ -0.94
FCF1-203ENST00000553615 CCDC24Q8N4L8 307 aa9.18□□□□□ -0.94
FCF1-203ENST00000553615 NAP1L5Q96NT1 182 aaPredicted RBP9.18□□□□□ -0.94
FCF1-203ENST00000553615 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
FCF1-203ENST00000553615 KIF21BO75037 1637 aa9.17□□□□□ -0.94
FCF1-203ENST00000553615 CCNYL3P0C7X3 344 aa9.17□□□□□ -0.94
FCF1-203ENST00000553615 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
FCF1-203ENST00000553615 CTDSPL2Q05D32 466 aa9.17□□□□□ -0.94
FCF1-203ENST00000553615 PER1O15534 1290 aaPredicted RBP9.16□□□□□ -0.94
FCF1-203ENST00000553615 PPP1R15AO75807 674 aaPredicted RBP9.16□□□□□ -0.94
FCF1-203ENST00000553615 MTERF4Q7Z6M4 381 aaKnown RBP9.16□□□□□ -0.94
FCF1-203ENST00000553615 HOMEZQ8IX15 550 aa9.16□□□□□ -0.94
FCF1-203ENST00000553615 SMAP1Q8IYB5 467 aaPredicted RBP9.16□□□□□ -0.94
FCF1-203ENST00000553615 BANK1Q8NDB2 785 aa9.16□□□□□ -0.94
FCF1-203ENST00000553615 NAP1L2Q9ULW6 460 aaPredicted RBP9.16□□□□□ -0.94
FCF1-203ENST00000553615 VPS8Q8N3P4 1428 aa9.15□□□□□ -0.94
FCF1-203ENST00000553615 TCERG1O14776 1098 aaKnown RBP9.15□□□□□ -0.94
FCF1-203ENST00000553615 USP17L8P0C7I0 530 aa9.15□□□□□ -0.94
FCF1-203ENST00000553615 FRAT1Q92837 279 aaPredicted RBP9.15□□□□□ -0.94
FCF1-203ENST00000553615 TRIM52Q96A61 297 aa9.15□□□□□ -0.94
FCF1-203ENST00000553615 ZBTB24O43167 697 aaPredicted RBP9.14□□□□□ -0.95
FCF1-203ENST00000553615 CTHP32929 405 aa9.14□□□□□ -0.95
FCF1-203ENST00000553615 UTP14CQ5TAP6 766 aaKnown RBP9.14□□□□□ -0.95
FCF1-203ENST00000553615 EVA1BQ9NVM1 165 aa9.14□□□□□ -0.95
FCF1-203ENST00000553615 TERF1P54274 439 aa9.13□□□□□ -0.95
FCF1-203ENST00000553615 KCNH2Q12809 1159 aa9.12□□□□□ -0.95
FCF1-203ENST00000553615 NFKBIBQ15653 356 aa9.12□□□□□ -0.95
FCF1-203ENST00000553615 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
FCF1-203ENST00000553615 BAZ1BQ9UIG0 1483 aaKnown RBP9.12□□□□□ -0.95
FCF1-203ENST00000553615 VIRMAQ69YN4 1812 aaKnown RBP9.12□□□□□ -0.95
FCF1-203ENST00000553615 ZBED9Q6R2W3 1325 aa9.11□□□□□ -0.95
FCF1-203ENST00000553615 APBB1O00213 710 aa9.1□□□□□ -0.95
FCF1-203ENST00000553615 RGS20O76081 388 aa9.1□□□□□ -0.95
FCF1-203ENST00000553615 F12P00748 615 aaPredicted RBP9.1□□□□□ -0.95
FCF1-203ENST00000553615 RPIAP49247 311 aa9.1□□□□□ -0.95
FCF1-203ENST00000553615 PLA2G2CQ5R387 149 aa9.1□□□□□ -0.95
FCF1-203ENST00000553615 TAF3Q5VWG9 929 aa9.1□□□□□ -0.95
FCF1-203ENST00000553615 ANP32BQ92688 251 aaKnown RBP9.1□□□□□ -0.95
FCF1-203ENST00000553615 MAP10Q9P2G4 905 aa9.1□□□□□ -0.95
FCF1-203ENST00000553615 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
FCF1-203ENST00000553615 SMG6Q86US8 1419 aaKnown RBP9.1□□□□□ -0.95
FCF1-203ENST00000553615 RRBP1Q9P2E9 1410 aaKnown RBP9.1□□□□□ -0.95
FCF1-203ENST00000553615 MAPKBP1O60336 1514 aa9.1□□□□□ -0.95
FCF1-203ENST00000553615 RNF123Q5XPI4 1314 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms