RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 ALS2Q96Q42 1657 aa18.08■□□□□ 0.48
SIX1-202ENST00000553535 PLCH1Q4KWH8 1693 aa18.07■□□□□ 0.48
SIX1-202ENST00000553535 ONECUT3O60422 494 aaPredicted RBP18.07■□□□□ 0.48
SIX1-202ENST00000553535 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
SIX1-202ENST00000553535 NUDT16Q96DE0 195 aaKnown RBP18.07■□□□□ 0.48
SIX1-202ENST00000553535 BRWD3Q6RI45 1802 aa18.06■□□□□ 0.48
SIX1-202ENST00000553535 KIAA1210Q9ULL0 1709 aa18.06■□□□□ 0.48
SIX1-202ENST00000553535 NBPF1Q3BBV0 1214 aa18.04■□□□□ 0.48
SIX1-202ENST00000553535 SEPT12Q8IYM1 358 aa18.04■□□□□ 0.48
SIX1-202ENST00000553535 CDK19Q9BWU1 502 aa18.04■□□□□ 0.48
SIX1-202ENST00000553535 ATP7BP35670 1465 aa18.04■□□□□ 0.48
SIX1-202ENST00000553535 CCDC9Q9Y3X0 531 aaKnown RBP18.03■□□□□ 0.48
SIX1-202ENST00000553535 ITSN1Q15811 1721 aa18.02■□□□□ 0.48
SIX1-202ENST00000553535 SRCAPQ6ZRS2 3230 aa18.02■□□□□ 0.48
SIX1-202ENST00000553535 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.48
SIX1-202ENST00000553535 BTG4Q9NY30 223 aa18.02■□□□□ 0.48
SIX1-202ENST00000553535 CRYBG1Q9Y4K1 1723 aa18.01■□□□□ 0.47
SIX1-202ENST00000553535 NRAPQ86VF7 1730 aa18■□□□□ 0.47
SIX1-202ENST00000553535 COL14A1Q05707 1796 aaKnown RBP18■□□□□ 0.47
SIX1-202ENST00000553535 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
SIX1-202ENST00000553535 PLEKHG3A1L390 1219 aa17.99■□□□□ 0.47
SIX1-202ENST00000553535 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
SIX1-202ENST00000553535 BLMP54132 1417 aaPredicted RBP17.98■□□□□ 0.47
SIX1-202ENST00000553535 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
SIX1-202ENST00000553535 KRT27Q7Z3Y8 459 aa17.98■□□□□ 0.47
SIX1-202ENST00000553535 ACEP12821 1306 aa17.98■□□□□ 0.47
SIX1-202ENST00000553535 ZRANB1Q9UGI0 708 aa17.97■□□□□ 0.47
SIX1-202ENST00000553535 TOPAZ1Q8N9V7 1692 aa17.96■□□□□ 0.47
SIX1-202ENST00000553535 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.46
SIX1-202ENST00000553535 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.46
SIX1-202ENST00000553535 SPATA31A5Q5VU36 1347 aa17.95■□□□□ 0.46
SIX1-202ENST00000553535 SPATA31A7Q8IWB4 1347 aa17.95■□□□□ 0.46
SIX1-202ENST00000553535 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
SIX1-202ENST00000553535 CENPJQ9HC77 1338 aaPredicted RBP17.94■□□□□ 0.46
SIX1-202ENST00000553535 NUTM2GQ5VZR2 741 aa17.93■□□□□ 0.46
SIX1-202ENST00000553535 DEFB132Q7Z7B7 95 aa17.93■□□□□ 0.46
SIX1-202ENST00000553535 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
SIX1-202ENST00000553535 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
SIX1-202ENST00000553535 PHRF1Q9P1Y6 1649 aaKnown RBP17.92■□□□□ 0.46
SIX1-202ENST00000553535 A0A0G2JS52 829 aa17.91■□□□□ 0.46
SIX1-202ENST00000553535 ZC3H6P61129 1189 aaKnown RBP17.91■□□□□ 0.46
SIX1-202ENST00000553535 MYT1Q01538 1121 aa17.91■□□□□ 0.46
SIX1-202ENST00000553535 CHRNA2Q15822 529 aa17.91■□□□□ 0.46
SIX1-202ENST00000553535 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
SIX1-202ENST00000553535 SF3B2Q13435 895 aaKnown RBP17.91■□□□□ 0.46
SIX1-202ENST00000553535 CABP2Q9NPB3 220 aa17.91■□□□□ 0.46
SIX1-202ENST00000553535 ABTB2Q8N961 1025 aa17.9■□□□□ 0.46
SIX1-202ENST00000553535 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
SIX1-202ENST00000553535 SPATA31A1Q5TZJ5 1347 aa17.89■□□□□ 0.45
SIX1-202ENST00000553535 QRICH2Q9H0J4 1663 aa17.88■□□□□ 0.45
SIX1-202ENST00000553535 THSD7AQ9UPZ6 1657 aa17.87■□□□□ 0.45
SIX1-202ENST00000553535 USP19O94966 1318 aa17.87■□□□□ 0.45
SIX1-202ENST00000553535 STRN4Q9NRL3 753 aa17.87■□□□□ 0.45
SIX1-202ENST00000553535 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
SIX1-202ENST00000553535 FAM182BQ5T319 152 aa17.86■□□□□ 0.45
SIX1-202ENST00000553535 NLRP13Q86W25 1043 aa17.86■□□□□ 0.45
SIX1-202ENST00000553535 CABP1Q9NZU7 370 aa17.86■□□□□ 0.45
SIX1-202ENST00000553535 BRD4O60885 1362 aaPredicted RBP17.86■□□□□ 0.45
SIX1-202ENST00000553535 TRPM1Q7Z4N2 1603 aa17.85■□□□□ 0.45
SIX1-202ENST00000553535 CPDO75976 1380 aa17.85■□□□□ 0.45
SIX1-202ENST00000553535 NRKQ7Z2Y5 1582 aa17.84■□□□□ 0.45
SIX1-202ENST00000553535 GCP02774 474 aa17.84■□□□□ 0.45
SIX1-202ENST00000553535 CAMTA1Q9Y6Y1 1673 aa17.84■□□□□ 0.45
SIX1-202ENST00000553535 BAG6P46379 1132 aa17.83■□□□□ 0.45
SIX1-202ENST00000553535 EVA1CP58658 441 aa17.83■□□□□ 0.45
SIX1-202ENST00000553535 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
SIX1-202ENST00000553535 USP6P35125 1406 aa17.82■□□□□ 0.44
SIX1-202ENST00000553535 SSH2Q76I76 1423 aa17.82■□□□□ 0.44
SIX1-202ENST00000553535 BARGINQ6ZT62 677 aa17.82■□□□□ 0.44
SIX1-202ENST00000553535 LMO7Q8WWI1 1683 aa17.81■□□□□ 0.44
SIX1-202ENST00000553535 LARP1Q6PKG0 1096 aaKnown RBP17.81■□□□□ 0.44
SIX1-202ENST00000553535 ROCK2O75116 1388 aaKnown RBP17.81■□□□□ 0.44
SIX1-202ENST00000553535 USP35Q9P2H5 1018 aa17.8■□□□□ 0.44
SIX1-202ENST00000553535 RGPD1P0DJD0 1748 aa17.8■□□□□ 0.44
SIX1-202ENST00000553535 NLRP6P59044 892 aa17.79■□□□□ 0.44
SIX1-202ENST00000553535 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
SIX1-202ENST00000553535 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
SIX1-202ENST00000553535 FAM196AQ6ZSG2 479 aa17.79■□□□□ 0.44
SIX1-202ENST00000553535 TCP11L2Q8N4U5 519 aa17.78■□□□□ 0.44
SIX1-202ENST00000553535 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
SIX1-202ENST00000553535 DISP2A7MBM2 1401 aa17.77■□□□□ 0.43
SIX1-202ENST00000553535 POTEHQ6S545 545 aa17.76■□□□□ 0.43
SIX1-202ENST00000553535 THRAP3Q9Y2W1 955 aaKnown RBP17.76■□□□□ 0.43
SIX1-202ENST00000553535 SLIT3O75094 1523 aa17.76■□□□□ 0.43
SIX1-202ENST00000553535 TNS1Q9HBL0 1735 aaKnown RBP17.76■□□□□ 0.43
SIX1-202ENST00000553535 TRIM37O94972 964 aa17.75■□□□□ 0.43
SIX1-202ENST00000553535 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
SIX1-202ENST00000553535 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
SIX1-202ENST00000553535 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
SIX1-202ENST00000553535 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
SIX1-202ENST00000553535 TTC21BQ7Z4L5 1316 aa17.74■□□□□ 0.43
SIX1-202ENST00000553535 COL18A1P39060 1754 aa17.73■□□□□ 0.43
SIX1-202ENST00000553535 AKAP12Q02952 1782 aa17.73■□□□□ 0.43
SIX1-202ENST00000553535 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
SIX1-202ENST00000553535 EZH2Q15910 746 aaKnown RBP17.73■□□□□ 0.43
SIX1-202ENST00000553535 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
SIX1-202ENST00000553535 CPSF1Q10570 1443 aaKnown RBP17.72■□□□□ 0.43
SIX1-202ENST00000553535 ZBTB7CA1YPR0 619 aa17.72■□□□□ 0.43
SIX1-202ENST00000553535 CRB1P82279 1406 aa17.72■□□□□ 0.43
SIX1-202ENST00000553535 SBNO2Q9Y2G9 1366 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms