RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
ABCD4-218ENST00000553486 WAPLQ7Z5K2 1190 aa20.42■□□□□ 0.86
ABCD4-218ENST00000553486 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
ABCD4-218ENST00000553486 ESCO1Q5FWF5 840 aa20.41■□□□□ 0.86
ABCD4-218ENST00000553486 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
ABCD4-218ENST00000553486 YTHDC2Q9H6S0 1430 aaKnown RBP20.41■□□□□ 0.86
ABCD4-218ENST00000553486 TULP4Q9NRJ4 1543 aa20.41■□□□□ 0.86
ABCD4-218ENST00000553486 UPF1Q92900 1129 aaKnown RBP eCLIP20.41■□□□□ 0.86
ABCD4-218ENST00000553486 NGLY1Q96IV0 654 aa20.4■□□□□ 0.86
ABCD4-218ENST00000553486 QTRT2Q9H974 415 aaKnown RBP20.4■□□□□ 0.86
ABCD4-218ENST00000553486 WDR43Q15061 677 aaKnown RBP eCLIP20.39■□□□□ 0.86
ABCD4-218ENST00000553486 PLEKHH1Q9ULM0 1364 aa20.39■□□□□ 0.85
ABCD4-218ENST00000553486 SLC12A5Q9H2X9 1139 aa20.39■□□□□ 0.85
ABCD4-218ENST00000553486 USP32Q8NFA0 1604 aa20.39■□□□□ 0.85
ABCD4-218ENST00000553486 RBM6P78332 1123 aaKnown RBP20.38■□□□□ 0.85
ABCD4-218ENST00000553486 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
ABCD4-218ENST00000553486 NSD3Q9BZ95 1437 aa20.38■□□□□ 0.85
ABCD4-218ENST00000553486 PXDNQ92626 1479 aa20.37■□□□□ 0.85
ABCD4-218ENST00000553486 KNDC1Q76NI1 1749 aa20.37■□□□□ 0.85
ABCD4-218ENST00000553486 SENP3-EIF4A1A0A087X0R7 540 aa20.37■□□□□ 0.85
ABCD4-218ENST00000553486 FOXO3O43524 673 aa20.37■□□□□ 0.85
ABCD4-218ENST00000553486 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
ABCD4-218ENST00000553486 RGS12O14924 1447 aa20.36■□□□□ 0.85
ABCD4-218ENST00000553486 NUTM2FA1L443 756 aa20.36■□□□□ 0.85
ABCD4-218ENST00000553486 POGKQ9P215 609 aa20.36■□□□□ 0.85
ABCD4-218ENST00000553486 NINLQ9Y2I6 1382 aa20.35■□□□□ 0.85
ABCD4-218ENST00000553486 COL22A1Q8NFW1 1626 aaPredicted RBP20.35■□□□□ 0.85
ABCD4-218ENST00000553486 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
ABCD4-218ENST00000553486 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
ABCD4-218ENST00000553486 SAFB2Q14151 953 aaKnown RBP eCLIP20.34■□□□□ 0.85
ABCD4-218ENST00000553486 PRAM1Q96QH2 718 aa20.34■□□□□ 0.85
ABCD4-218ENST00000553486 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
ABCD4-218ENST00000553486 FNBP4Q8N3X1 1017 aaPredicted RBP20.33■□□□□ 0.85
ABCD4-218ENST00000553486 SIRT1Q96EB6 747 aa20.33■□□□□ 0.85
ABCD4-218ENST00000553486 CABP2Q9NPB3 220 aa20.33■□□□□ 0.85
ABCD4-218ENST00000553486 PPP4R2Q9NY27 417 aa20.33■□□□□ 0.85
ABCD4-218ENST00000553486 USP21Q9UK80 565 aa20.33■□□□□ 0.85
ABCD4-218ENST00000553486 SALL2Q9Y467 1007 aaPredicted RBP20.33■□□□□ 0.85
ABCD4-218ENST00000553486 DLC1Q96QB1 1528 aa20.33■□□□□ 0.84
ABCD4-218ENST00000553486 MORC1Q86VD1 984 aa20.32■□□□□ 0.84
ABCD4-218ENST00000553486 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
ABCD4-218ENST00000553486 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
ABCD4-218ENST00000553486 SRPK2P78362 688 aaKnown RBP20.31■□□□□ 0.84
ABCD4-218ENST00000553486 NSD2O96028 1365 aa20.3■□□□□ 0.84
ABCD4-218ENST00000553486 TRPC5Q9UL62 973 aaPredicted RBP20.3■□□□□ 0.84
ABCD4-218ENST00000553486 FMN2Q9NZ56 1722 aa20.29■□□□□ 0.84
ABCD4-218ENST00000553486 EP400Q96L91 3159 aa20.29■□□□□ 0.84
ABCD4-218ENST00000553486 SRCAPQ6ZRS2 3230 aa20.29■□□□□ 0.84
ABCD4-218ENST00000553486 MINK1Q8N4C8 1332 aaPredicted RBP20.29■□□□□ 0.84
ABCD4-218ENST00000553486 POLR3AO14802 1390 aaPredicted RBP20.28■□□□□ 0.84
ABCD4-218ENST00000553486 ATRNO75882 1429 aa20.27■□□□□ 0.83
ABCD4-218ENST00000553486 KIF1AQ12756 1690 aa20.26■□□□□ 0.83
ABCD4-218ENST00000553486 SPATA31A3Q5VYP0 1347 aa20.26■□□□□ 0.83
ABCD4-218ENST00000553486 BCL9LQ86UU0 1499 aa20.25■□□□□ 0.83
ABCD4-218ENST00000553486 TERF2IPQ9NYB0 399 aa20.25■□□□□ 0.83
ABCD4-218ENST00000553486 KRT28Q7Z3Y7 464 aa20.23■□□□□ 0.83
ABCD4-218ENST00000553486 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
ABCD4-218ENST00000553486 RCAN3Q9UKA8 241 aa20.23■□□□□ 0.83
ABCD4-218ENST00000553486 PHF8Q9UPP1 1060 aa20.23■□□□□ 0.83
ABCD4-218ENST00000553486 A0A1W2PP64 1363 aa20.23■□□□□ 0.83
ABCD4-218ENST00000553486 CDCA7LQ96GN5 454 aa20.22■□□□□ 0.83
ABCD4-218ENST00000553486 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
ABCD4-218ENST00000553486 HDGFL2Q7Z4V5 671 aaPredicted RBP20.2■□□□□ 0.82
ABCD4-218ENST00000553486 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
ABCD4-218ENST00000553486 TSHZ2Q9NRE2 1034 aa20.2■□□□□ 0.82
ABCD4-218ENST00000553486 TNS3Q68CZ2 1445 aa20.2■□□□□ 0.82
ABCD4-218ENST00000553486 TNNT2P45379 298 aaPredicted RBP20.19■□□□□ 0.82
ABCD4-218ENST00000553486 MARF1Q9Y4F3 1742 aaKnown RBP20.19■□□□□ 0.82
ABCD4-218ENST00000553486 ANKRD26Q9UPS8 1709 aa20.19■□□□□ 0.82
ABCD4-218ENST00000553486 PSME1Q06323 249 aa20.18■□□□□ 0.82
ABCD4-218ENST00000553486 ANKARQ7Z5J8 1434 aa20.18■□□□□ 0.82
ABCD4-218ENST00000553486 RRP1P56182 461 aaKnown RBP20.18■□□□□ 0.82
ABCD4-218ENST00000553486 GJD4Q96KN9 370 aaPredicted RBP20.18■□□□□ 0.82
ABCD4-218ENST00000553486 CCDC146Q8IYE0 955 aa20.17■□□□□ 0.82
ABCD4-218ENST00000553486 SLIT2O94813 1529 aa20.17■□□□□ 0.82
ABCD4-218ENST00000553486 ZNF521Q96K83 1311 aa20.17■□□□□ 0.82
ABCD4-218ENST00000553486 ADGRB2O60241 1585 aa20.17■□□□□ 0.82
ABCD4-218ENST00000553486 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
ABCD4-218ENST00000553486 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
ABCD4-218ENST00000553486 MTHFSP49914 203 aa20.16■□□□□ 0.82
ABCD4-218ENST00000553486 GOLGA2Q08379 1002 aa20.16■□□□□ 0.82
ABCD4-218ENST00000553486 RGPD8O14715 1765 aaPredicted RBP20.16■□□□□ 0.82
ABCD4-218ENST00000553486 UNC5CLQ8IV45 518 aa20.16■□□□□ 0.82
ABCD4-218ENST00000553486 APAF1O14727 1248 aa20.14■□□□□ 0.81
ABCD4-218ENST00000553486 CABP1Q9NZU7 370 aa20.14■□□□□ 0.81
ABCD4-218ENST00000553486 ARHGEF10O15013 1369 aa20.14■□□□□ 0.81
ABCD4-218ENST00000553486 HAP1P54257 671 aaPredicted RBP20.13■□□□□ 0.81
ABCD4-218ENST00000553486 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
ABCD4-218ENST00000553486 CABLES1Q8TDN4 633 aa20.13■□□□□ 0.81
ABCD4-218ENST00000553486 ATP7BP35670 1465 aa20.13■□□□□ 0.81
ABCD4-218ENST00000553486 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.13■□□□□ 0.81
ABCD4-218ENST00000553486 KIF20BQ96Q89 1820 aa20.13■□□□□ 0.81
ABCD4-218ENST00000553486 B4GALNT3Q6L9W6 998 aa20.13■□□□□ 0.81
ABCD4-218ENST00000553486 WASLO00401 505 aaPredicted RBP20.12■□□□□ 0.81
ABCD4-218ENST00000553486 LMOD2Q6P5Q4 547 aa20.12■□□□□ 0.81
ABCD4-218ENST00000553486 FYB1O15117 783 aa20.11■□□□□ 0.81
ABCD4-218ENST00000553486 GGNBP2Q9H3C7 697 aa20.11■□□□□ 0.81
ABCD4-218ENST00000553486 PLEKHG5O94827 1062 aa20.1■□□□□ 0.81
ABCD4-218ENST00000553486 DUSP27Q5VZP5 1158 aa20.1■□□□□ 0.81
ABCD4-218ENST00000553486 GLI3P10071 1580 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms