RNA–Protein interactions for RNA: ENST00000553460.5

TMEM55B-203, humanhuman

TSL 5

Gene TMEM55B, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-203ENST00000553460 BRWD3Q6RI45 1802 aa23.46■■□□□ 1.35
TMEM55B-203ENST00000553460 CDK19Q9BWU1 502 aa23.45■■□□□ 1.34
TMEM55B-203ENST00000553460 SEPT12Q8IYM1 358 aa23.44■■□□□ 1.34
TMEM55B-203ENST00000553460 NBPF1Q3BBV0 1214 aa23.42■■□□□ 1.34
TMEM55B-203ENST00000553460 BTG4Q9NY30 223 aa23.42■■□□□ 1.34
TMEM55B-203ENST00000553460 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
TMEM55B-203ENST00000553460 POLR3AO14802 1390 aaPredicted RBP23.41■■□□□ 1.34
TMEM55B-203ENST00000553460 ONECUT3O60422 494 aaPredicted RBP23.41■■□□□ 1.34
TMEM55B-203ENST00000553460 CCDC61Q9Y6R9 512 aa23.41■■□□□ 1.34
TMEM55B-203ENST00000553460 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
TMEM55B-203ENST00000553460 CENPJQ9HC77 1338 aaPredicted RBP23.39■■□□□ 1.34
TMEM55B-203ENST00000553460 QRICH2Q9H0J4 1663 aa23.38■■□□□ 1.33
TMEM55B-203ENST00000553460 A0A0G2JS52 829 aa23.38■■□□□ 1.33
TMEM55B-203ENST00000553460 MYT1Q01538 1121 aa23.38■■□□□ 1.33
TMEM55B-203ENST00000553460 PRDM11Q9NQV5 511 aa23.38■■□□□ 1.33
TMEM55B-203ENST00000553460 ACEP12821 1306 aa23.37■■□□□ 1.33
TMEM55B-203ENST00000553460 KRT27Q7Z3Y8 459 aa23.37■■□□□ 1.33
TMEM55B-203ENST00000553460 ZRANB1Q9UGI0 708 aa23.37■■□□□ 1.33
TMEM55B-203ENST00000553460 PLEKHG3A1L390 1219 aa23.36■■□□□ 1.33
TMEM55B-203ENST00000553460 SRPK2P78362 688 aaKnown RBP23.35■■□□□ 1.33
TMEM55B-203ENST00000553460 SF3B2Q13435 895 aaKnown RBP23.35■■□□□ 1.33
TMEM55B-203ENST00000553460 NBPF8Q3BBV2 869 aa23.35■■□□□ 1.33
TMEM55B-203ENST00000553460 FAM98CQ17RN3 349 aaKnown RBP23.34■■□□□ 1.33
TMEM55B-203ENST00000553460 L3MBTL2Q969R5 705 aa23.34■■□□□ 1.33
TMEM55B-203ENST00000553460 KIAA0232Q92628 1395 aa23.34■■□□□ 1.33
TMEM55B-203ENST00000553460 PPIP5K1Q6PFW1 1433 aa23.33■■□□□ 1.33
TMEM55B-203ENST00000553460 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.32
TMEM55B-203ENST00000553460 SPATA31A5Q5VU36 1347 aa23.33■■□□□ 1.32
TMEM55B-203ENST00000553460 SPATA31A7Q8IWB4 1347 aa23.33■■□□□ 1.32
TMEM55B-203ENST00000553460 NRKQ7Z2Y5 1582 aa23.31■■□□□ 1.32
TMEM55B-203ENST00000553460 THSD7AQ9UPZ6 1657 aa23.3■■□□□ 1.32
TMEM55B-203ENST00000553460 NUTM2GQ5VZR2 741 aa23.3■■□□□ 1.32
TMEM55B-203ENST00000553460 ABTB2Q8N961 1025 aa23.29■■□□□ 1.32
TMEM55B-203ENST00000553460 CABP2Q9NPB3 220 aa23.29■■□□□ 1.32
TMEM55B-203ENST00000553460 BRD4O60885 1362 aaPredicted RBP23.28■■□□□ 1.32
TMEM55B-203ENST00000553460 ZC3H6P61129 1189 aaKnown RBP23.28■■□□□ 1.32
TMEM55B-203ENST00000553460 CHRNA2Q15822 529 aa23.28■■□□□ 1.32
TMEM55B-203ENST00000553460 SIN3AQ96ST3 1273 aa23.28■■□□□ 1.32
TMEM55B-203ENST00000553460 USP19O94966 1318 aa23.27■■□□□ 1.32
TMEM55B-203ENST00000553460 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
TMEM55B-203ENST00000553460 DEFB132Q7Z7B7 95 aa23.26■■□□□ 1.31
TMEM55B-203ENST00000553460 SPATA31A1Q5TZJ5 1347 aa23.26■■□□□ 1.31
TMEM55B-203ENST00000553460 ROCK2O75116 1388 aaKnown RBP23.26■■□□□ 1.31
TMEM55B-203ENST00000553460 STRN4Q9NRL3 753 aa23.25■■□□□ 1.31
TMEM55B-203ENST00000553460 CPDO75976 1380 aa23.25■■□□□ 1.31
TMEM55B-203ENST00000553460 NLRP13Q86W25 1043 aa23.24■■□□□ 1.31
TMEM55B-203ENST00000553460 EVC2Q86UK5 1308 aa23.24■■□□□ 1.31
TMEM55B-203ENST00000553460 RGPD1P0DJD0 1748 aa23.24■■□□□ 1.31
TMEM55B-203ENST00000553460 USP6P35125 1406 aa23.23■■□□□ 1.31
TMEM55B-203ENST00000553460 LMO7Q8WWI1 1683 aa23.22■■□□□ 1.31
TMEM55B-203ENST00000553460 SRCAPQ6ZRS2 3230 aa23.22■■□□□ 1.31
TMEM55B-203ENST00000553460 BAG6P46379 1132 aa23.22■■□□□ 1.31
TMEM55B-203ENST00000553460 SSH2Q76I76 1423 aa23.22■■□□□ 1.31
TMEM55B-203ENST00000553460 EVA1CP58658 441 aa23.21■■□□□ 1.31
TMEM55B-203ENST00000553460 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
TMEM55B-203ENST00000553460 CAMTA1Q9Y6Y1 1673 aa23.19■■□□□ 1.3
TMEM55B-203ENST00000553460 GCP02774 474 aa23.18■■□□□ 1.3
TMEM55B-203ENST00000553460 SLIT3O75094 1523 aa23.17■■□□□ 1.3
TMEM55B-203ENST00000553460 FAM182BQ5T319 152 aa23.16■■□□□ 1.3
TMEM55B-203ENST00000553460 BARGINQ6ZT62 677 aa23.16■■□□□ 1.3
TMEM55B-203ENST00000553460 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
TMEM55B-203ENST00000553460 PIK3C2AO00443 1686 aa23.16■■□□□ 1.3
TMEM55B-203ENST00000553460 NLRP6P59044 892 aa23.15■■□□□ 1.3
TMEM55B-203ENST00000553460 TNS1Q9HBL0 1735 aaKnown RBP23.15■■□□□ 1.3
TMEM55B-203ENST00000553460 COL5A2P05997 1499 aaPredicted RBP23.14■■□□□ 1.29
TMEM55B-203ENST00000553460 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.29
TMEM55B-203ENST00000553460 AKAP12Q02952 1782 aa23.14■■□□□ 1.29
TMEM55B-203ENST00000553460 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
TMEM55B-203ENST00000553460 DISP2A7MBM2 1401 aa23.13■■□□□ 1.29
TMEM55B-203ENST00000553460 FAM196AQ6ZSG2 479 aa23.12■■□□□ 1.29
TMEM55B-203ENST00000553460 ZNF692Q9BU19 519 aaPredicted RBP23.11■■□□□ 1.29
TMEM55B-203ENST00000553460 THRAP3Q9Y2W1 955 aaKnown RBP23.11■■□□□ 1.29
TMEM55B-203ENST00000553460 SBNO2Q9Y2G9 1366 aa23.11■■□□□ 1.29
TMEM55B-203ENST00000553460 ZBTB7CA1YPR0 619 aa23.1■■□□□ 1.29
TMEM55B-203ENST00000553460 PDE3BQ13370 1112 aa23.1■■□□□ 1.29
TMEM55B-203ENST00000553460 AATKQ6ZMQ8 1374 aa23.1■■□□□ 1.29
TMEM55B-203ENST00000553460 CRB1P82279 1406 aa23.09■■□□□ 1.29
TMEM55B-203ENST00000553460 EN1Q05925 392 aaPredicted RBP23.09■■□□□ 1.29
TMEM55B-203ENST00000553460 TONSLQ96HA7 1378 aa23.09■■□□□ 1.29
TMEM55B-203ENST00000553460 PARP4Q9UKK3 1724 aaKnown RBP23.08■■□□□ 1.29
TMEM55B-203ENST00000553460 TTC21BQ7Z4L5 1316 aa23.08■■□□□ 1.28
TMEM55B-203ENST00000553460 TTC21AQ8NDW8 1320 aa23.08■■□□□ 1.28
TMEM55B-203ENST00000553460 CARD11Q9BXL7 1154 aa23.07■■□□□ 1.28
TMEM55B-203ENST00000553460 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
TMEM55B-203ENST00000553460 TRIM37O94972 964 aa23.06■■□□□ 1.28
TMEM55B-203ENST00000553460 LRP5O75197 1615 aa23.06■■□□□ 1.28
TMEM55B-203ENST00000553460 MON2Q7Z3U7 1717 aa23.05■■□□□ 1.28
TMEM55B-203ENST00000553460 KTN1Q86UP2 1357 aaKnown RBP23.05■■□□□ 1.28
TMEM55B-203ENST00000553460 KCNH5Q8NCM2 988 aa23.05■■□□□ 1.28
TMEM55B-203ENST00000553460 COL18A1P39060 1754 aa23.04■■□□□ 1.28
TMEM55B-203ENST00000553460 PARD3Q8TEW0 1356 aa23.03■■□□□ 1.28
TMEM55B-203ENST00000553460 PSDA5PKW4 1024 aaPredicted RBP23.02■■□□□ 1.28
TMEM55B-203ENST00000553460 C11orf95C9JLR9 678 aaPredicted RBP23.01■■□□□ 1.27
TMEM55B-203ENST00000553460 APBA3O96018 575 aa23.01■■□□□ 1.27
TMEM55B-203ENST00000553460 WNK3Q9BYP7 1800 aa23.01■■□□□ 1.27
TMEM55B-203ENST00000553460 LRRC37A3O60309 1634 aa23■■□□□ 1.27
TMEM55B-203ENST00000553460 EZH2Q15910 746 aaKnown RBP23■■□□□ 1.27
TMEM55B-203ENST00000553460 TOM1L2Q6ZVM7 507 aa23■■□□□ 1.27
TMEM55B-203ENST00000553460 WDR17Q8IZU2 1322 aa23■■□□□ 1.27
TMEM55B-203ENST00000553460 NFAT5O94916 1531 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms