RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 NBPF8Q3BBV2 869 aa23.84■■□□□ 1.41
XRCC3-204ENST00000553361 SRPK2P78362 688 aaKnown RBP23.83■■□□□ 1.41
XRCC3-204ENST00000553361 PRDM11Q9NQV5 511 aa23.83■■□□□ 1.41
XRCC3-204ENST00000553361 FAM98CQ17RN3 349 aaKnown RBP23.82■■□□□ 1.4
XRCC3-204ENST00000553361 CENPJQ9HC77 1338 aaPredicted RBP23.82■■□□□ 1.4
XRCC3-204ENST00000553361 ARHGEF28Q8N1W1 1705 aaKnown RBP23.81■■□□□ 1.4
XRCC3-204ENST00000553361 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.81■■□□□ 1.4
XRCC3-204ENST00000553361 PLEKHG3A1L390 1219 aa23.81■■□□□ 1.4
XRCC3-204ENST00000553361 TRPM3Q9HCF6 1732 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-204ENST00000553361 KRT27Q7Z3Y8 459 aa23.8■■□□□ 1.4
XRCC3-204ENST00000553361 CABP2Q9NPB3 220 aa23.8■■□□□ 1.4
XRCC3-204ENST00000553361 ZC3H6P61129 1189 aaKnown RBP23.79■■□□□ 1.4
XRCC3-204ENST00000553361 CHRNA2Q15822 529 aa23.79■■□□□ 1.4
XRCC3-204ENST00000553361 ZRANB1Q9UGI0 708 aa23.78■■□□□ 1.4
XRCC3-204ENST00000553361 SRCAPQ6ZRS2 3230 aa23.78■■□□□ 1.4
XRCC3-204ENST00000553361 ABTB2Q8N961 1025 aa23.77■■□□□ 1.4
XRCC3-204ENST00000553361 POLR3AO14802 1390 aaPredicted RBP23.77■■□□□ 1.4
XRCC3-204ENST00000553361 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
XRCC3-204ENST00000553361 SF3B2Q13435 895 aaKnown RBP23.76■■□□□ 1.39
XRCC3-204ENST00000553361 KIAA0232Q92628 1395 aa23.76■■□□□ 1.39
XRCC3-204ENST00000553361 ABCA3Q99758 1704 aa23.76■■□□□ 1.39
XRCC3-204ENST00000553361 DEFB132Q7Z7B7 95 aa23.75■■□□□ 1.39
XRCC3-204ENST00000553361 PLCH1Q4KWH8 1693 aa23.75■■□□□ 1.39
XRCC3-204ENST00000553361 BLMP54132 1417 aaPredicted RBP23.75■■□□□ 1.39
XRCC3-204ENST00000553361 NWD2Q9ULI1 1742 aa23.74■■□□□ 1.39
XRCC3-204ENST00000553361 KIAA1210Q9ULL0 1709 aa23.74■■□□□ 1.39
XRCC3-204ENST00000553361 SPATA31A5Q5VU36 1347 aa23.74■■□□□ 1.39
XRCC3-204ENST00000553361 SPATA31A7Q8IWB4 1347 aa23.74■■□□□ 1.39
XRCC3-204ENST00000553361 STRN4Q9NRL3 753 aa23.73■■□□□ 1.39
XRCC3-204ENST00000553361 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
XRCC3-204ENST00000553361 PPIP5K1Q6PFW1 1433 aa23.71■■□□□ 1.39
XRCC3-204ENST00000553361 EVA1CP58658 441 aa23.7■■□□□ 1.38
XRCC3-204ENST00000553361 FAM182BQ5T319 152 aa23.69■■□□□ 1.38
XRCC3-204ENST00000553361 COL14A1Q05707 1796 aaKnown RBP23.69■■□□□ 1.38
XRCC3-204ENST00000553361 ITSN1Q15811 1721 aa23.68■■□□□ 1.38
XRCC3-204ENST00000553361 NLRP13Q86W25 1043 aa23.68■■□□□ 1.38
XRCC3-204ENST00000553361 ROCK2O75116 1388 aaKnown RBP23.67■■□□□ 1.38
XRCC3-204ENST00000553361 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
XRCC3-204ENST00000553361 SPATA31A1Q5TZJ5 1347 aa23.66■■□□□ 1.38
XRCC3-204ENST00000553361 EVC2Q86UK5 1308 aa23.66■■□□□ 1.38
XRCC3-204ENST00000553361 BRWD3Q6RI45 1802 aa23.66■■□□□ 1.38
XRCC3-204ENST00000553361 NRAPQ86VF7 1730 aa23.65■■□□□ 1.38
XRCC3-204ENST00000553361 GCP02774 474 aa23.65■■□□□ 1.38
XRCC3-204ENST00000553361 ZBTB7CA1YPR0 619 aa23.63■■□□□ 1.37
XRCC3-204ENST00000553361 NLRP6P59044 892 aa23.63■■□□□ 1.37
XRCC3-204ENST00000553361 USP19O94966 1318 aa23.62■■□□□ 1.37
XRCC3-204ENST00000553361 BAG6P46379 1132 aa23.62■■□□□ 1.37
XRCC3-204ENST00000553361 LARP1Q6PKG0 1096 aaKnown RBP23.62■■□□□ 1.37
XRCC3-204ENST00000553361 TOPAZ1Q8N9V7 1692 aa23.62■■□□□ 1.37
XRCC3-204ENST00000553361 CRYBG1Q9Y4K1 1723 aa23.61■■□□□ 1.37
XRCC3-204ENST00000553361 BRD4O60885 1362 aaPredicted RBP23.59■■□□□ 1.37
XRCC3-204ENST00000553361 CPDO75976 1380 aa23.59■■□□□ 1.37
XRCC3-204ENST00000553361 USP6P35125 1406 aa23.58■■□□□ 1.36
XRCC3-204ENST00000553361 SSH2Q76I76 1423 aa23.58■■□□□ 1.36
XRCC3-204ENST00000553361 EN1Q05925 392 aaPredicted RBP23.57■■□□□ 1.36
XRCC3-204ENST00000553361 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
XRCC3-204ENST00000553361 PHRF1Q9P1Y6 1649 aaKnown RBP23.56■■□□□ 1.36
XRCC3-204ENST00000553361 PDE3BQ13370 1112 aa23.56■■□□□ 1.36
XRCC3-204ENST00000553361 TCP11L2Q8N4U5 519 aa23.56■■□□□ 1.36
XRCC3-204ENST00000553361 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
XRCC3-204ENST00000553361 CARD11Q9BXL7 1154 aa23.56■■□□□ 1.36
XRCC3-204ENST00000553361 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
XRCC3-204ENST00000553361 BARGINQ6ZT62 677 aa23.55■■□□□ 1.36
XRCC3-204ENST00000553361 FAM196AQ6ZSG2 479 aa23.54■■□□□ 1.36
XRCC3-204ENST00000553361 TRPM1Q7Z4N2 1603 aa23.54■■□□□ 1.36
XRCC3-204ENST00000553361 TRIM37O94972 964 aa23.53■■□□□ 1.36
XRCC3-204ENST00000553361 TTC21BQ7Z4L5 1316 aa23.53■■□□□ 1.36
XRCC3-204ENST00000553361 NRKQ7Z2Y5 1582 aa23.52■■□□□ 1.36
XRCC3-204ENST00000553361 SOX12O15370 315 aa23.51■■□□□ 1.35
XRCC3-204ENST00000553361 PSDA5PKW4 1024 aaPredicted RBP23.5■■□□□ 1.35
XRCC3-204ENST00000553361 THRAP3Q9Y2W1 955 aaKnown RBP23.5■■□□□ 1.35
XRCC3-204ENST00000553361 THSD7AQ9UPZ6 1657 aa23.5■■□□□ 1.35
XRCC3-204ENST00000553361 TONSLQ96HA7 1378 aa23.5■■□□□ 1.35
XRCC3-204ENST00000553361 EZH2Q15910 746 aaKnown RBP23.48■■□□□ 1.35
XRCC3-204ENST00000553361 APBA3O96018 575 aa23.47■■□□□ 1.35
XRCC3-204ENST00000553361 TOM1L2Q6ZVM7 507 aa23.47■■□□□ 1.35
XRCC3-204ENST00000553361 TMC1Q8TDI8 760 aa23.47■■□□□ 1.35
XRCC3-204ENST00000553361 AATKQ6ZMQ8 1374 aa23.47■■□□□ 1.35
XRCC3-204ENST00000553361 COL5A2P05997 1499 aaPredicted RBP23.46■■□□□ 1.35
XRCC3-204ENST00000553361 KTN1Q86UP2 1357 aaKnown RBP23.46■■□□□ 1.35
XRCC3-204ENST00000553361 AXIN2Q9Y2T1 843 aa23.46■■□□□ 1.35
XRCC3-204ENST00000553361 TTC21AQ8NDW8 1320 aa23.45■■□□□ 1.34
XRCC3-204ENST00000553361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.45■■□□□ 1.34
XRCC3-204ENST00000553361 KCNH5Q8NCM2 988 aa23.45■■□□□ 1.34
XRCC3-204ENST00000553361 ARHGEF25Q86VW2 580 aa23.44■■□□□ 1.34
XRCC3-204ENST00000553361 LMO7Q8WWI1 1683 aa23.44■■□□□ 1.34
XRCC3-204ENST00000553361 CRB1P82279 1406 aa23.43■■□□□ 1.34
XRCC3-204ENST00000553361 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
XRCC3-204ENST00000553361 CAMKK2Q96RR4 588 aa23.43■■□□□ 1.34
XRCC3-204ENST00000553361 CPSF1Q10570 1443 aaKnown RBP23.42■■□□□ 1.34
XRCC3-204ENST00000553361 R3HDM1Q15032 1099 aaKnown RBP23.42■■□□□ 1.34
XRCC3-204ENST00000553361 SLIT3O75094 1523 aa23.42■■□□□ 1.34
XRCC3-204ENST00000553361 CSB-PGBD3P0DP91 1061 aa23.41■■□□□ 1.34
XRCC3-204ENST00000553361 SLC12A5Q9H2X9 1139 aa23.41■■□□□ 1.34
XRCC3-204ENST00000553361 SBNO2Q9Y2G9 1366 aa23.4■■□□□ 1.34
XRCC3-204ENST00000553361 DISP2A7MBM2 1401 aa23.4■■□□□ 1.34
XRCC3-204ENST00000553361 WDR17Q8IZU2 1322 aa23.39■■□□□ 1.34
XRCC3-204ENST00000553361 DDB1Q16531 1140 aa23.39■■□□□ 1.33
XRCC3-204ENST00000553361 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
XRCC3-204ENST00000553361 HDGFL2Q7Z4V5 671 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms